RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NCOA1Q15788 1441 aa15.78■□□□□ 0.12
CCDC47-203ENST00000580986 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.12
CCDC47-203ENST00000580986 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
CCDC47-203ENST00000580986 DUOX2Q9NRD8 1548 aa15.76■□□□□ 0.11
CCDC47-203ENST00000580986 BCORL1Q5H9F3 1711 aa15.76■□□□□ 0.11
CCDC47-203ENST00000580986 ATP10AO60312 1499 aa15.76■□□□□ 0.11
CCDC47-203ENST00000580986 YEATS2Q9ULM3 1422 aa15.76■□□□□ 0.11
CCDC47-203ENST00000580986 EIF2AK4Q9P2K8 1649 aaKnown RBP15.75■□□□□ 0.11
CCDC47-203ENST00000580986 AGLP35573 1532 aa15.74■□□□□ 0.11
CCDC47-203ENST00000580986 GCC2Q8IWJ2 1684 aa15.74■□□□□ 0.11
CCDC47-203ENST00000580986 HFM1A2PYH4 1435 aa15.74■□□□□ 0.11
CCDC47-203ENST00000580986 A2MP01023 1474 aa15.73■□□□□ 0.11
CCDC47-203ENST00000580986 ERBINQ96RT1 1412 aa15.73■□□□□ 0.11
CCDC47-203ENST00000580986 KIF15Q9NS87 1388 aa15.73■□□□□ 0.11
CCDC47-203ENST00000580986 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
CCDC47-203ENST00000580986 DHX29Q7Z478 1369 aaKnown RBP15.72■□□□□ 0.11
CCDC47-203ENST00000580986 NAIPQ13075 1403 aa15.69■□□□□ 0.1
CCDC47-203ENST00000580986 FAM135AQ9P2D6 1515 aa15.68■□□□□ 0.1
CCDC47-203ENST00000580986 ANKRD50Q9ULJ7 1429 aa15.68■□□□□ 0.1
CCDC47-203ENST00000580986 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
CCDC47-203ENST00000580986 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
CCDC47-203ENST00000580986 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
CCDC47-203ENST00000580986 DEPDC5O75140 1603 aa15.67■□□□□ 0.1
CCDC47-203ENST00000580986 RNF17Q9BXT8 1623 aaKnown RBP15.67■□□□□ 0.1
CCDC47-203ENST00000580986 ITGAEP38570 1179 aa15.66■□□□□ 0.1
CCDC47-203ENST00000580986 SIGLEC1Q9BZZ2 1709 aa15.65■□□□□ 0.1
CCDC47-203ENST00000580986 RRP7BPQ9NSQ0 103 aa15.65■□□□□ 0.1
CCDC47-203ENST00000580986 PRDM15P57071 1507 aaPredicted RBP15.63■□□□□ 0.09
CCDC47-203ENST00000580986 UNC13BO14795 1591 aa15.63■□□□□ 0.09
CCDC47-203ENST00000580986 SETD5Q9C0A6 1442 aa15.62■□□□□ 0.09
CCDC47-203ENST00000580986 HRCP23327 699 aa15.62■□□□□ 0.09
CCDC47-203ENST00000580986 MROH1Q8NDA8 1641 aa15.61■□□□□ 0.09
CCDC47-203ENST00000580986 KDM5DQ9BY66 1539 aa15.6■□□□□ 0.09
CCDC47-203ENST00000580986 ZC3H13Q5T200 1668 aaKnown RBP15.6■□□□□ 0.09
CCDC47-203ENST00000580986 VWDEQ8N2E2 1590 aa15.59■□□□□ 0.09
CCDC47-203ENST00000580986 KIF3BO15066 747 aa15.56■□□□□ 0.08
CCDC47-203ENST00000580986 LMTK2Q8IWU2 1503 aa15.56■□□□□ 0.08
CCDC47-203ENST00000580986 IQGAP3Q86VI3 1631 aa15.56■□□□□ 0.08
CCDC47-203ENST00000580986 ADAMTSL3P82987 1691 aa15.56■□□□□ 0.08
CCDC47-203ENST00000580986 RAB3GAP2Q9H2M9 1393 aa15.55■□□□□ 0.08
CCDC47-203ENST00000580986 MROH2AA6NES4 1674 aa15.54■□□□□ 0.08
CCDC47-203ENST00000580986 CNTLNQ9NXG0 1405 aa15.54■□□□□ 0.08
CCDC47-203ENST00000580986 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
CCDC47-203ENST00000580986 KANK1Q14678 1352 aa15.52■□□□□ 0.08
CCDC47-203ENST00000580986 ABCC3O15438 1527 aa15.52■□□□□ 0.07
CCDC47-203ENST00000580986 FER1L4A9Z1Z3 1794 aa15.52■□□□□ 0.07
CCDC47-203ENST00000580986 ARID4BQ4LE39 1312 aaPredicted RBP15.51■□□□□ 0.07
CCDC47-203ENST00000580986 TET3O43151 1660 aa15.51■□□□□ 0.07
CCDC47-203ENST00000580986 ABCB7O75027 752 aa15.49■□□□□ 0.07
CCDC47-203ENST00000580986 ARHGAP31Q2M1Z3 1444 aa15.49■□□□□ 0.07
CCDC47-203ENST00000580986 CEP152O94986 1710 aa15.48■□□□□ 0.07
CCDC47-203ENST00000580986 EFCAB6Q5THR3 1501 aa15.48■□□□□ 0.07
CCDC47-203ENST00000580986 RPRD2Q5VT52 1461 aaKnown RBP15.48■□□□□ 0.07
CCDC47-203ENST00000580986 CAMSAP1Q5T5Y3 1602 aa15.48■□□□□ 0.07
CCDC47-203ENST00000580986 MADDQ8WXG6 1647 aa15.48■□□□□ 0.07
CCDC47-203ENST00000580986 GGT6Q6P531 493 aa15.48■□□□□ 0.07
CCDC47-203ENST00000580986 PCGF6Q9BYE7 350 aa15.48■□□□□ 0.07
CCDC47-203ENST00000580986 NUP155O75694 1391 aa15.48■□□□□ 0.07
CCDC47-203ENST00000580986 CLTCQ00610 1675 aaKnown RBP15.48■□□□□ 0.07
CCDC47-203ENST00000580986 POTEHQ6S545 545 aa15.47■□□□□ 0.07
CCDC47-203ENST00000580986 PZPP20742 1482 aa15.46■□□□□ 0.07
CCDC47-203ENST00000580986 WASHC2CQ9Y4E1 1318 aa15.45■□□□□ 0.06
CCDC47-203ENST00000580986 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
CCDC47-203ENST00000580986 RIMS1Q86UR5 1692 aaKnown RBP15.43■□□□□ 0.06
CCDC47-203ENST00000580986 E9PCH4 1651 aa15.42■□□□□ 0.06
CCDC47-203ENST00000580986 C3P01024 1663 aa15.42■□□□□ 0.06
CCDC47-203ENST00000580986 MLECQ14165 292 aa15.42■□□□□ 0.06
CCDC47-203ENST00000580986 ESF1Q9H501 851 aaKnown RBP15.42■□□□□ 0.06
CCDC47-203ENST00000580986 NPATQ14207 1427 aa15.42■□□□□ 0.06
CCDC47-203ENST00000580986 ZMYM3Q14202 1370 aa15.4■□□□□ 0.06
CCDC47-203ENST00000580986 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
CCDC47-203ENST00000580986 SPATA31D1Q6ZQQ2 1576 aa15.4■□□□□ 0.06
CCDC47-203ENST00000580986 PTPRMP28827 1452 aa15.39■□□□□ 0.05
CCDC47-203ENST00000580986 PREX1Q8TCU6 1659 aa15.38■□□□□ 0.05
CCDC47-203ENST00000580986 MPHOSPH9Q99550 1183 aa15.38■□□□□ 0.05
CCDC47-203ENST00000580986 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
CCDC47-203ENST00000580986 NOS1P29475 1434 aa15.37■□□□□ 0.05
CCDC47-203ENST00000580986 SPHKAPQ2M3C7 1700 aa15.37■□□□□ 0.05
CCDC47-203ENST00000580986 PTPRTO14522 1441 aa15.36■□□□□ 0.05
CCDC47-203ENST00000580986 ERVK-7P63135 1459 aa15.36■□□□□ 0.05
CCDC47-203ENST00000580986 KDM4FA0A1W2PPD8 638 aa15.36■□□□□ 0.05
CCDC47-203ENST00000580986 TRPM2O94759 1503 aa15.35■□□□□ 0.05
CCDC47-203ENST00000580986 DHX57Q6P158 1386 aaKnown RBP15.34■□□□□ 0.05
CCDC47-203ENST00000580986 PIK3C2BO00750 1634 aa15.33■□□□□ 0.04
CCDC47-203ENST00000580986 PKD2Q13563 968 aa15.33■□□□□ 0.04
CCDC47-203ENST00000580986 KDM5AP29375 1690 aaKnown RBP15.32■□□□□ 0.04
CCDC47-203ENST00000580986 SETD1BQ9UPS6 1966 aaKnown RBP15.32■□□□□ 0.04
CCDC47-203ENST00000580986 SYNMO15061 1565 aa15.32■□□□□ 0.04
CCDC47-203ENST00000580986 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
CCDC47-203ENST00000580986 NLRP1Q9C000 1473 aa15.31■□□□□ 0.04
CCDC47-203ENST00000580986 PLA2R1Q13018 1463 aa15.3■□□□□ 0.04
CCDC47-203ENST00000580986 NEURL4Q96JN8 1562 aa15.3■□□□□ 0.04
CCDC47-203ENST00000580986 ZNF142P52746 1687 aaPredicted RBP15.29■□□□□ 0.04
CCDC47-203ENST00000580986 TNRQ92752 1358 aa15.29■□□□□ 0.04
CCDC47-203ENST00000580986 ANKRD30BQ9BXX2 1392 aa15.29■□□□□ 0.04
CCDC47-203ENST00000580986 MYO3AQ8NEV4 1616 aa15.28■□□□□ 0.04
CCDC47-203ENST00000580986 SLC52A1Q9NWF4 448 aa15.28■□□□□ 0.04
CCDC47-203ENST00000580986 CFAP65Q6ZU64 1925 aaKnown RBP15.25■□□□□ 0.03
CCDC47-203ENST00000580986 CLTCL1P53675 1640 aa15.25■□□□□ 0.03
CCDC47-203ENST00000580986 CEBPAP49715 358 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms