RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 MYO3AQ8NEV4 1616 aa24.09■■□□□ 1.45
PMP22-208ENST00000580584 RNF17Q9BXT8 1623 aaKnown RBP24.09■■□□□ 1.45
PMP22-208ENST00000580584 DUOX2Q9NRD8 1548 aa24.09■■□□□ 1.45
PMP22-208ENST00000580584 FAM135AQ9P2D6 1515 aa24.09■■□□□ 1.45
PMP22-208ENST00000580584 WASHC2CQ9Y4E1 1318 aa24.09■■□□□ 1.45
PMP22-208ENST00000580584 EIF2AK4Q9P2K8 1649 aaKnown RBP24.08■■□□□ 1.45
PMP22-208ENST00000580584 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
PMP22-208ENST00000580584 RRP7BPQ9NSQ0 103 aa24.07■■□□□ 1.44
PMP22-208ENST00000580584 ILDR1Q86SU0 546 aaPredicted RBP24.06■■□□□ 1.44
PMP22-208ENST00000580584 FAM50AQ14320 339 aaKnown RBP24.05■■□□□ 1.44
PMP22-208ENST00000580584 STRCQ7RTU9 1775 aa24.05■■□□□ 1.44
PMP22-208ENST00000580584 MROH1Q8NDA8 1641 aa24.05■■□□□ 1.44
PMP22-208ENST00000580584 PZPP20742 1482 aa24.05■■□□□ 1.44
PMP22-208ENST00000580584 CHIC2Q9UKJ5 165 aa24.04■■□□□ 1.44
PMP22-208ENST00000580584 FBXO31Q5XUX0 539 aaPredicted RBP24.03■■□□□ 1.44
PMP22-208ENST00000580584 ABCC3O15438 1527 aa24.03■■□□□ 1.44
PMP22-208ENST00000580584 PPARGC1BQ86YN6 1023 aaKnown RBP24.02■■□□□ 1.44
PMP22-208ENST00000580584 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
PMP22-208ENST00000580584 ZNF142P52746 1687 aaPredicted RBP24.02■■□□□ 1.44
PMP22-208ENST00000580584 NCOA1Q15788 1441 aa24.01■■□□□ 1.43
PMP22-208ENST00000580584 ERBINQ96RT1 1412 aa24.01■■□□□ 1.43
PMP22-208ENST00000580584 CAMSAP1Q5T5Y3 1602 aa24.01■■□□□ 1.43
PMP22-208ENST00000580584 ANKRD30AQ9BXX3 1397 aa24■■□□□ 1.43
PMP22-208ENST00000580584 TNRQ92752 1358 aa23.99■■□□□ 1.43
PMP22-208ENST00000580584 ZC3H13Q5T200 1668 aaKnown RBP23.99■■□□□ 1.43
PMP22-208ENST00000580584 PRDM15P57071 1507 aaPredicted RBP23.96■■□□□ 1.43
PMP22-208ENST00000580584 DMRT2Q9Y5R5 561 aa23.96■■□□□ 1.43
PMP22-208ENST00000580584 A2ML1A8K2U0 1454 aa23.95■■□□□ 1.42
PMP22-208ENST00000580584 ADGRL2O95490 1459 aa23.95■■□□□ 1.42
PMP22-208ENST00000580584 PTPRTO14522 1441 aa23.93■■□□□ 1.42
PMP22-208ENST00000580584 CEP152O94986 1710 aa23.93■■□□□ 1.42
PMP22-208ENST00000580584 NCKAP5LQ9HCH0 1330 aa23.92■■□□□ 1.42
PMP22-208ENST00000580584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.92■■□□□ 1.42
PMP22-208ENST00000580584 PLA2R1Q13018 1463 aa23.91■■□□□ 1.42
PMP22-208ENST00000580584 DEPDC5O75140 1603 aa23.91■■□□□ 1.42
PMP22-208ENST00000580584 ERVK-7P63135 1459 aa23.89■■□□□ 1.42
PMP22-208ENST00000580584 SPATA31D1Q6ZQQ2 1576 aa23.89■■□□□ 1.41
PMP22-208ENST00000580584 NLRP1Q9C000 1473 aa23.87■■□□□ 1.41
PMP22-208ENST00000580584 FBXO41Q8TF61 875 aa23.87■■□□□ 1.41
PMP22-208ENST00000580584 CERKQ8TCT0 537 aa23.85■■□□□ 1.41
PMP22-208ENST00000580584 KANK1Q14678 1352 aa23.85■■□□□ 1.41
PMP22-208ENST00000580584 PKD2Q13563 968 aa23.84■■□□□ 1.41
PMP22-208ENST00000580584 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
PMP22-208ENST00000580584 ARHGAP31Q2M1Z3 1444 aa23.83■■□□□ 1.4
PMP22-208ENST00000580584 VWDEQ8N2E2 1590 aa23.82■■□□□ 1.4
PMP22-208ENST00000580584 UGGT1Q9NYU2 1555 aa23.82■■□□□ 1.4
PMP22-208ENST00000580584 ITGAEP38570 1179 aa23.82■■□□□ 1.4
PMP22-208ENST00000580584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.8■■□□□ 1.4
PMP22-208ENST00000580584 LMTK2Q8IWU2 1503 aa23.8■■□□□ 1.4
PMP22-208ENST00000580584 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
PMP22-208ENST00000580584 NEURL4Q96JN8 1562 aa23.77■■□□□ 1.4
PMP22-208ENST00000580584 LTBP4Q8N2S1 1624 aa23.77■■□□□ 1.4
PMP22-208ENST00000580584 THEMISQ8N1K5 641 aaPredicted RBP23.76■■□□□ 1.39
PMP22-208ENST00000580584 EFCAB6Q5THR3 1501 aa23.75■■□□□ 1.39
PMP22-208ENST00000580584 ZNF335Q9H4Z2 1342 aaPredicted RBP23.75■■□□□ 1.39
PMP22-208ENST00000580584 POLR1AO95602 1720 aaPredicted RBP23.74■■□□□ 1.39
PMP22-208ENST00000580584 RRBP1Q9P2E9 1410 aaKnown RBP23.73■■□□□ 1.39
PMP22-208ENST00000580584 ANKLE2Q86XL3 938 aa23.72■■□□□ 1.39
PMP22-208ENST00000580584 UNC13BO14795 1591 aa23.71■■□□□ 1.39
PMP22-208ENST00000580584 UBR1Q8IWV7 1749 aa23.7■■□□□ 1.38
PMP22-208ENST00000580584 SYNMO15061 1565 aa23.69■■□□□ 1.38
PMP22-208ENST00000580584 CFAP65Q6ZU64 1925 aaKnown RBP23.69■■□□□ 1.38
PMP22-208ENST00000580584 NPHP4O75161 1426 aaPredicted RBP23.67■■□□□ 1.38
PMP22-208ENST00000580584 NOS1P29475 1434 aa23.67■■□□□ 1.38
PMP22-208ENST00000580584 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
PMP22-208ENST00000580584 MED14O60244 1454 aa23.65■■□□□ 1.38
PMP22-208ENST00000580584 TET3O43151 1660 aa23.64■■□□□ 1.38
PMP22-208ENST00000580584 RPRD2Q5VT52 1461 aaKnown RBP23.63■■□□□ 1.37
PMP22-208ENST00000580584 IDI1Q13907 227 aa23.62■■□□□ 1.37
PMP22-208ENST00000580584 SCAF11Q99590 1463 aaKnown RBP23.62■■□□□ 1.37
PMP22-208ENST00000580584 ARHGAP23Q9P227 1491 aa23.62■■□□□ 1.37
PMP22-208ENST00000580584 IQGAP1P46940 1657 aa23.61■■□□□ 1.37
PMP22-208ENST00000580584 SLIT1O75093 1534 aa23.61■■□□□ 1.37
PMP22-208ENST00000580584 IQGAP3Q86VI3 1631 aa23.6■■□□□ 1.37
PMP22-208ENST00000580584 STAG3Q9UJ98 1225 aa23.6■■□□□ 1.37
PMP22-208ENST00000580584 IQSEC2Q5JU85 1478 aa23.6■■□□□ 1.37
PMP22-208ENST00000580584 LTKP29376 864 aa23.59■■□□□ 1.37
PMP22-208ENST00000580584 NUP155O75694 1391 aa23.59■■□□□ 1.37
PMP22-208ENST00000580584 GCC2Q8IWJ2 1684 aa23.59■■□□□ 1.37
PMP22-208ENST00000580584 TMEM2Q9UHN6 1383 aa23.58■■□□□ 1.37
PMP22-208ENST00000580584 ADGRB3O60242 1522 aa23.58■■□□□ 1.36
PMP22-208ENST00000580584 TXNDC2Q86VQ3 553 aa23.56■■□□□ 1.36
PMP22-208ENST00000580584 E9PCH4 1651 aa23.56■■□□□ 1.36
PMP22-208ENST00000580584 KDM5AP29375 1690 aaKnown RBP23.54■■□□□ 1.36
PMP22-208ENST00000580584 NAIPQ13075 1403 aa23.54■■□□□ 1.36
PMP22-208ENST00000580584 SLC52A1Q9NWF4 448 aa23.54■■□□□ 1.36
PMP22-208ENST00000580584 EID1Q9Y6B2 187 aa23.53■■□□□ 1.36
PMP22-208ENST00000580584 CPS1P31327 1500 aa23.53■■□□□ 1.36
PMP22-208ENST00000580584 HFM1A2PYH4 1435 aa23.48■■□□□ 1.35
PMP22-208ENST00000580584 UBAP1LF5GYI3 381 aa23.46■■□□□ 1.35
PMP22-208ENST00000580584 TMEM131LA2VDJ0 1609 aa23.45■■□□□ 1.34
PMP22-208ENST00000580584 STRCP1A6NGW2 1772 aa23.45■■□□□ 1.34
PMP22-208ENST00000580584 CHGAP10645 457 aaKnown RBP23.44■■□□□ 1.34
PMP22-208ENST00000580584 ZFYVE9O95405 1425 aa23.42■■□□□ 1.34
PMP22-208ENST00000580584 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
PMP22-208ENST00000580584 RIMS2Q9UQ26 1411 aa23.42■■□□□ 1.34
PMP22-208ENST00000580584 LRRC7Q96NW7 1537 aa23.4■■□□□ 1.34
PMP22-208ENST00000580584 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
PMP22-208ENST00000580584 SLC26A8Q96RN1 970 aa23.39■■□□□ 1.33
PMP22-208ENST00000580584 SPHKAPQ2M3C7 1700 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms