RNA–Protein interactions for RNA: ENST00000580534.5

ASPSCR1-208, Transcript of ASPSCR1, UBX domain containing tether for SLC2A4, human

TSL 2 BASIC

Gene ASPSCR1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASPSCR1-208	ENST00000580534	SIN3A	Q96ST3	1273 aa		32.3	■■■□□ 2.76
ASPSCR1-208	ENST00000580534	IQGAP3	Q86VI3	1631 aa		32.29	■■■□□ 2.76
ASPSCR1-208	ENST00000580534	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.29	■■■□□ 2.76	1e-10	■□□□□ 10.7
ASPSCR1-208	ENST00000580534	TRH	P20396	242 aa	Predicted RBP	32.28	■■■□□ 2.76
ASPSCR1-208	ENST00000580534	NEUROD1	Q13562	356 aa		32.27	■■■□□ 2.76
ASPSCR1-208	ENST00000580534	PKD2	Q13563	968 aa		32.27	■■■□□ 2.76
ASPSCR1-208	ENST00000580534	DIP2C	Q9Y2E4	1556 aa		32.27	■■■□□ 2.76
ASPSCR1-208	ENST00000580534	DEPDC5	O75140	1603 aa		32.27	■■■□□ 2.76
ASPSCR1-208	ENST00000580534	TIMELESS	Q9UNS1	1208 aa		32.26	■■■□□ 2.75
ASPSCR1-208	ENST00000580534	KIF3B	O15066	747 aa		32.25	■■■□□ 2.75
ASPSCR1-208	ENST00000580534	FOXD1	Q16676	465 aa		32.24	■■■□□ 2.75
ASPSCR1-208	ENST00000580534	ANKRD30B	Q9BXX2	1392 aa		32.24	■■■□□ 2.75
ASPSCR1-208	ENST00000580534	KANK1	Q14678	1352 aa		32.22	■■■□□ 2.75
ASPSCR1-208	ENST00000580534	YEATS2	Q9ULM3	1422 aa		32.21	■■■□□ 2.75
ASPSCR1-208	ENST00000580534	BCORL1	Q5H9F3	1711 aa		32.19	■■■□□ 2.74
ASPSCR1-208	ENST00000580534	PRDM15	P57071	1507 aa	Predicted RBP	32.18	■■■□□ 2.74
ASPSCR1-208	ENST00000580534	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.18	■■■□□ 2.74
ASPSCR1-208	ENST00000580534	RNF17	Q9BXT8	1623 aa	Known RBP	32.16	■■■□□ 2.74
ASPSCR1-208	ENST00000580534	TONSL	Q96HA7	1378 aa		32.15	■■■□□ 2.74
ASPSCR1-208	ENST00000580534	VWDE	Q8N2E2	1590 aa		32.13	■■■□□ 2.73
ASPSCR1-208	ENST00000580534	ATP10A	O60312	1499 aa		32.13	■■■□□ 2.73
ASPSCR1-208	ENST00000580534	MROH1	Q8NDA8	1641 aa		32.13	■■■□□ 2.73
ASPSCR1-208	ENST00000580534	RPRD2	Q5VT52	1461 aa	Known RBP	32.09	■■■□□ 2.73
ASPSCR1-208	ENST00000580534	RERE	Q9P2R6	1566 aa		32.09	■■■□□ 2.73
ASPSCR1-208	ENST00000580534	TET3	O43151	1660 aa		32.08	■■■□□ 2.73
ASPSCR1-208	ENST00000580534	ARHGEF40	Q8TER5	1519 aa		32.06	■■■□□ 2.72
ASPSCR1-208	ENST00000580534	GGT6	Q6P531	493 aa		32.03	■■■□□ 2.72
ASPSCR1-208	ENST00000580534	LMTK2	Q8IWU2	1503 aa		32.02	■■■□□ 2.72
ASPSCR1-208	ENST00000580534	AGL	P35573	1532 aa		32	■■■□□ 2.71
ASPSCR1-208	ENST00000580534		E9PCH4	1651 aa		31.99	■■■□□ 2.71
ASPSCR1-208	ENST00000580534	CEP152	O94986	1710 aa		31.96	■■■□□ 2.71
ASPSCR1-208	ENST00000580534	EFCAB6	Q5THR3	1501 aa		31.96	■■■□□ 2.71
ASPSCR1-208	ENST00000580534	CCDC144A	A2RUR9	1427 aa		31.96	■■■□□ 2.71
ASPSCR1-208	ENST00000580534	PPP1R15A	O75807	674 aa	Predicted RBP	31.95	■■■□□ 2.71
ASPSCR1-208	ENST00000580534	WASHC2C	Q9Y4E1	1318 aa		31.93	■■■□□ 2.7
ASPSCR1-208	ENST00000580534	PLA2R1	Q13018	1463 aa		31.93	■■■□□ 2.7
ASPSCR1-208	ENST00000580534	ZC3H13	Q5T200	1668 aa	Known RBP	31.92	■■■□□ 2.7
ASPSCR1-208	ENST00000580534	ABCC3	O15438	1527 aa		31.92	■■■□□ 2.7
ASPSCR1-208	ENST00000580534	SPHKAP	Q2M3C7	1700 aa		31.89	■■■□□ 2.7
ASPSCR1-208	ENST00000580534	L3MBTL2	Q969R5	705 aa		31.88	■■■□□ 2.69
ASPSCR1-208	ENST00000580534	PTPRT	O14522	1441 aa		31.88	■■■□□ 2.69
ASPSCR1-208	ENST00000580534	TRPM2	O94759	1503 aa		31.87	■■■□□ 2.69
ASPSCR1-208	ENST00000580534	PPP6R1	Q9UPN7	881 aa		31.86	■■■□□ 2.69
ASPSCR1-208	ENST00000580534	CAMSAP1	Q5T5Y3	1602 aa		31.85	■■■□□ 2.69
ASPSCR1-208	ENST00000580534	SIGLEC1	Q9BZZ2	1709 aa		31.81	■■■□□ 2.68
ASPSCR1-208	ENST00000580534	NPAT	Q14207	1427 aa		31.79	■■■□□ 2.68
ASPSCR1-208	ENST00000580534	ARHGAP31	Q2M1Z3	1444 aa		31.78	■■■□□ 2.68
ASPSCR1-208	ENST00000580534	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.74	■■■□□ 2.67
ASPSCR1-208	ENST00000580534	CLTCL1	P53675	1640 aa		31.72	■■■□□ 2.67
ASPSCR1-208	ENST00000580534	CNTLN	Q9NXG0	1405 aa		31.72	■■■□□ 2.67
ASPSCR1-208	ENST00000580534	ZNF316	A6NFI3	1004 aa	Predicted RBP	31.71	■■■□□ 2.67
ASPSCR1-208	ENST00000580534	MLEC	Q14165	292 aa		31.71	■■■□□ 2.67
ASPSCR1-208	ENST00000580534	ESF1	Q9H501	851 aa	Known RBP	31.67	■■■□□ 2.66
ASPSCR1-208	ENST00000580534	CLTC	Q00610	1675 aa	Known RBP	31.67	■■■□□ 2.66
ASPSCR1-208	ENST00000580534	NOS1	P29475	1434 aa		31.66	■■■□□ 2.66
ASPSCR1-208	ENST00000580534	SPATA31E1	Q6ZUB1	1445 aa		31.65	■■■□□ 2.66
ASPSCR1-208	ENST00000580534	CFAP65	Q6ZU64	1925 aa	Known RBP	31.65	■■■□□ 2.66
ASPSCR1-208	ENST00000580534	NEURL4	Q96JN8	1562 aa		31.64	■■■□□ 2.66
ASPSCR1-208	ENST00000580534	RGL3	Q3MIN7	710 aa		31.64	■■■□□ 2.66
ASPSCR1-208	ENST00000580534	DCAF11	Q8TEB1	546 aa		31.64	■■■□□ 2.66
ASPSCR1-208	ENST00000580534	KIF1B	O60333	1816 aa		31.62	■■■□□ 2.65
ASPSCR1-208	ENST00000580534	UHRF1BP1	Q6BDS2	1440 aa		31.61	■■■□□ 2.65
ASPSCR1-208	ENST00000580534	UGGT1	Q9NYU2	1555 aa		31.61	■■■□□ 2.65
ASPSCR1-208	ENST00000580534	PREX1	Q8TCU6	1659 aa		31.6	■■■□□ 2.65
ASPSCR1-208	ENST00000580534	NBPF8	Q3BBV2	869 aa		31.59	■■■□□ 2.65
ASPSCR1-208	ENST00000580534	KDM2A	Q9Y2K7	1162 aa		31.58	■■■□□ 2.65
ASPSCR1-208	ENST00000580534	SYNM	O15061	1565 aa		31.57	■■■□□ 2.64
ASPSCR1-208	ENST00000580534	ZNF326	Q5BKZ1	582 aa	Known RBP	31.56	■■■□□ 2.64
ASPSCR1-208	ENST00000580534	STAC3	Q96MF2	364 aa		31.55	■■■□□ 2.64
ASPSCR1-208	ENST00000580534	PIK3C2B	O00750	1634 aa		31.54	■■■□□ 2.64
ASPSCR1-208	ENST00000580534	ERVK-7	P63135	1459 aa		31.54	■■■□□ 2.64
ASPSCR1-208	ENST00000580534	SLC52A1	Q9NWF4	448 aa		31.53	■■■□□ 2.64
ASPSCR1-208	ENST00000580534	ADGRB3	O60242	1522 aa		31.51	■■■□□ 2.63
ASPSCR1-208	ENST00000580534	ZMYM3	Q14202	1370 aa		31.5	■■■□□ 2.63
ASPSCR1-208	ENST00000580534	MROH2A	A6NES4	1674 aa		31.49	■■■□□ 2.63
ASPSCR1-208	ENST00000580534	PRAG1	Q86YV5	1406 aa		31.49	■■■□□ 2.63
ASPSCR1-208	ENST00000580534	SPATA31D1	Q6ZQQ2	1576 aa		31.48	■■■□□ 2.63
ASPSCR1-208	ENST00000580534	RALGAPB	Q86X10	1494 aa		31.48	■■■□□ 2.63
ASPSCR1-208	ENST00000580534	FBXO31	Q5XUX0	539 aa	Predicted RBP	31.48	■■■□□ 2.63
ASPSCR1-208	ENST00000580534	CHGA	P10645	457 aa	Known RBP	31.47	■■■□□ 2.63
ASPSCR1-208	ENST00000580534	IDI1	Q13907	227 aa		31.43	■■■□□ 2.62
ASPSCR1-208	ENST00000580534	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.42	■■■□□ 2.62	8e-8	■■■■■ 53.6
ASPSCR1-208	ENST00000580534	FER1L4	A9Z1Z3	1794 aa		31.42	■■■□□ 2.62
ASPSCR1-208	ENST00000580534	RPGRIP1L	Q68CZ1	1315 aa		31.39	■■■□□ 2.62
ASPSCR1-208	ENST00000580534	MYOM2	P54296	1465 aa		31.39	■■■□□ 2.62
ASPSCR1-208	ENST00000580534	TRPM1	Q7Z4N2	1603 aa		31.39	■■■□□ 2.62
ASPSCR1-208	ENST00000580534	IFT172	Q9UG01	1749 aa		31.39	■■■□□ 2.62
ASPSCR1-208	ENST00000580534	MADD	Q8WXG6	1647 aa		31.38	■■■□□ 2.61
ASPSCR1-208	ENST00000580534	ROCK2	O75116	1388 aa	Known RBP	31.35	■■■□□ 2.61
ASPSCR1-208	ENST00000580534	HSPA5	P11021	654 aa	Known RBP	31.34	■■■□□ 2.61
ASPSCR1-208	ENST00000580534	TMEM131L	A2VDJ0	1609 aa		31.34	■■■□□ 2.61
ASPSCR1-208	ENST00000580534	CARD11	Q9BXL7	1154 aa		31.33	■■■□□ 2.61
ASPSCR1-208	ENST00000580534	PPL	O60437	1756 aa		31.32	■■■□□ 2.61
ASPSCR1-208	ENST00000580534	TNR	Q92752	1358 aa		31.31	■■■□□ 2.6
ASPSCR1-208	ENST00000580534	STAG3	Q9UJ98	1225 aa		31.3	■■■□□ 2.6
ASPSCR1-208	ENST00000580534	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.3	■■■□□ 2.6
ASPSCR1-208	ENST00000580534	C3	P01024	1663 aa		31.29	■■■□□ 2.6
ASPSCR1-208	ENST00000580534	GPRASP1	Q5JY77	1395 aa		31.29	■■■□□ 2.6
ASPSCR1-208	ENST00000580534	LAMC1	P11047	1609 aa		31.28	■■■□□ 2.6
ASPSCR1-208	ENST00000580534	USP47	Q96K76	1375 aa		31.28	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms