RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 A2ML1A8K2U0 1454 aa34.35■■■■□ 3.09
RBFOX3-204ENST00000580508 KDM5DQ9BY66 1539 aa34.35■■■■□ 3.09
RBFOX3-204ENST00000580508 LOC105371045A0A1W2PR82 267 aa34.34■■■■□ 3.09
RBFOX3-204ENST00000580508 DNMT1P26358 1616 aaKnown RBP34.33■■■■□ 3.09
RBFOX3-204ENST00000580508 MAP3K1Q13233 1512 aa34.32■■■■□ 3.08
RBFOX3-204ENST00000580508 PZPP20742 1482 aa34.31■■■■□ 3.08
RBFOX3-204ENST00000580508 MAST1Q9Y2H9 1570 aa34.28■■■■□ 3.08
RBFOX3-204ENST00000580508 ZNF335Q9H4Z2 1342 aaPredicted RBP34.27■■■■□ 3.08
RBFOX3-204ENST00000580508 TSPY4P0CV99 314 aa34.26■■■■□ 3.08
RBFOX3-204ENST00000580508 TSPY10P0CW01 314 aa34.26■■■■□ 3.08
RBFOX3-204ENST00000580508 TNRQ92752 1358 aa34.25■■■■□ 3.07
RBFOX3-204ENST00000580508 FBXO31Q5XUX0 539 aaPredicted RBP34.25■■■■□ 3.07
RBFOX3-204ENST00000580508 KANK4Q5T7N3 995 aaPredicted RBP34.23■■■■□ 3.07
RBFOX3-204ENST00000580508 WASHC2CQ9Y4E1 1318 aa34.23■■■■□ 3.07
RBFOX3-204ENST00000580508 RNF17Q9BXT8 1623 aaKnown RBP34.22■■■■□ 3.07
RBFOX3-204ENST00000580508 POLR1AO95602 1720 aaPredicted RBP34.2■■■■□ 3.07
RBFOX3-204ENST00000580508 MIA2Q96PC5 1412 aa34.2■■■■□ 3.06
RBFOX3-204ENST00000580508 MYOM3Q5VTT5 1437 aa34.18■■■■□ 3.06
RBFOX3-204ENST00000580508 NEURL4Q96JN8 1562 aa34.17■■■■□ 3.06
RBFOX3-204ENST00000580508 EIF2AK4Q9P2K8 1649 aaKnown RBP34.16■■■■□ 3.06
RBFOX3-204ENST00000580508 NLRP1Q9C000 1473 aa34.14■■■■□ 3.06
RBFOX3-204ENST00000580508 ZC3H13Q5T200 1668 aaKnown RBP34.13■■■■□ 3.05
RBFOX3-204ENST00000580508 ABCC3O15438 1527 aa34.12■■■■□ 3.05
RBFOX3-204ENST00000580508 MROH1Q8NDA8 1641 aa34.11■■■■□ 3.05
RBFOX3-204ENST00000580508 DISP3Q9P2K9 1392 aa34.07■■■■□ 3.04
RBFOX3-204ENST00000580508 SPATA31D1Q6ZQQ2 1576 aa34.06■■■■□ 3.04
RBFOX3-204ENST00000580508 UGGT1Q9NYU2 1555 aa34.06■■■■□ 3.04
RBFOX3-204ENST00000580508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.05■■■■□ 3.04
RBFOX3-204ENST00000580508 THEMISQ8N1K5 641 aaPredicted RBP34.04■■■■□ 3.04
RBFOX3-204ENST00000580508 DEPDC5O75140 1603 aa34.04■■■■□ 3.04
RBFOX3-204ENST00000580508 DUOX2Q9NRD8 1548 aa34.03■■■■□ 3.04
RBFOX3-204ENST00000580508 UBAP1LF5GYI3 381 aa34.02■■■■□ 3.04
RBFOX3-204ENST00000580508 MED14O60244 1454 aa34.01■■■■□ 3.04
RBFOX3-204ENST00000580508 CROCC2H7BZ55 1655 aa34.01■■■■□ 3.04
RBFOX3-204ENST00000580508 ANKLE2Q86XL3 938 aa34.01■■■■□ 3.03
RBFOX3-204ENST00000580508 CEP152O94986 1710 aa34.01■■■■□ 3.03
RBFOX3-204ENST00000580508 CPS1P31327 1500 aa33.99■■■■□ 3.03
RBFOX3-204ENST00000580508 ERVK-7P63135 1459 aa33.99■■■■□ 3.03
RBFOX3-204ENST00000580508 SHANK2Q9UPX8 1470 aa33.99■■■■□ 3.03
RBFOX3-204ENST00000580508 VWDEQ8N2E2 1590 aa33.97■■■■□ 3.03
RBFOX3-204ENST00000580508 PTPN23Q9H3S7 1636 aa33.97■■■■□ 3.03
RBFOX3-204ENST00000580508 ABCC5O15440 1437 aa33.96■■■■□ 3.03
RBFOX3-204ENST00000580508 ILDR2Q71H61 639 aa33.96■■■■□ 3.03
RBFOX3-204ENST00000580508 CFAP65Q6ZU64 1925 aaKnown RBP33.94■■■■□ 3.02
RBFOX3-204ENST00000580508 NPHP4O75161 1426 aaPredicted RBP33.94■■■■□ 3.02
RBFOX3-204ENST00000580508 PRDM15P57071 1507 aaPredicted RBP33.93■■■■□ 3.02
RBFOX3-204ENST00000580508 KIF15Q9NS87 1388 aa33.92■■■■□ 3.02
RBFOX3-204ENST00000580508 IQGAP1P46940 1657 aa33.91■■■■□ 3.02
RBFOX3-204ENST00000580508 ERBINQ96RT1 1412 aa33.9■■■■□ 3.02
RBFOX3-204ENST00000580508 UBR1Q8IWV7 1749 aa33.89■■■■□ 3.02
RBFOX3-204ENST00000580508 DAPK1P53355 1430 aa33.87■■■■□ 3.01
RBFOX3-204ENST00000580508 ARHGAP31Q2M1Z3 1444 aa33.87■■■■□ 3.01
RBFOX3-204ENST00000580508 FGD6Q6ZV73 1430 aa33.86■■■■□ 3.01
RBFOX3-204ENST00000580508 APLP2Q06481 763 aa33.85■■■■□ 3.01
RBFOX3-204ENST00000580508 RRP7BPQ9NSQ0 103 aa33.83■■■■□ 3.01
RBFOX3-204ENST00000580508 STRCP1A6NGW2 1772 aa33.81■■■■□ 3
RBFOX3-204ENST00000580508 TOM1O60784 492 aa33.78■■■■□ 3
RBFOX3-204ENST00000580508 ARHGAP23Q9P227 1491 aa33.77■■■■□ 3
RBFOX3-204ENST00000580508 ALKQ9UM73 1620 aa33.77■■■■□ 3
RBFOX3-204ENST00000580508 SLIT1O75093 1534 aa33.76■■■■□ 3
RBFOX3-204ENST00000580508 SOCS7O14512 581 aa33.76■■■□□ 2.99
RBFOX3-204ENST00000580508 SCAF11Q99590 1463 aaKnown RBP33.74■■■□□ 2.99
RBFOX3-204ENST00000580508 LMTK2Q8IWU2 1503 aa33.72■■■□□ 2.99
RBFOX3-204ENST00000580508 ANKRD30AQ9BXX3 1397 aa33.72■■■□□ 2.99
RBFOX3-204ENST00000580508 SYNMO15061 1565 aa33.71■■■□□ 2.99
RBFOX3-204ENST00000580508 LRRC7Q96NW7 1537 aa33.7■■■□□ 2.99
RBFOX3-204ENST00000580508 HSPA1LP34931 641 aa33.7■■■□□ 2.99
RBFOX3-204ENST00000580508 PIP4K2BP78356 416 aa33.7■■■□□ 2.99
RBFOX3-204ENST00000580508 PIK3C2BO00750 1634 aa33.7■■■□□ 2.99
RBFOX3-204ENST00000580508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.69■■■□□ 2.98
RBFOX3-204ENST00000580508 KANK1Q14678 1352 aa33.69■■■□□ 2.98
RBFOX3-204ENST00000580508 LTKP29376 864 aa33.68■■■□□ 2.98
RBFOX3-204ENST00000580508 SCAF1Q9H7N4 1312 aaKnown RBP33.67■■■□□ 2.98
RBFOX3-204ENST00000580508 KDM5AP29375 1690 aaKnown RBP33.67■■■□□ 2.98
RBFOX3-204ENST00000580508 ADGRL2O95490 1459 aa33.66■■■□□ 2.98
RBFOX3-204ENST00000580508 CHIC2Q9UKJ5 165 aa33.66■■■□□ 2.98
RBFOX3-204ENST00000580508 TXNDC2Q86VQ3 553 aa33.63■■■□□ 2.97
RBFOX3-204ENST00000580508 TMEM2Q9UHN6 1383 aa33.6■■■□□ 2.97
RBFOX3-204ENST00000580508 EFCAB6Q5THR3 1501 aa33.59■■■□□ 2.97
RBFOX3-204ENST00000580508 MED1Q15648 1581 aaPredicted RBP33.57■■■□□ 2.96
RBFOX3-204ENST00000580508 NOS1P29475 1434 aa33.57■■■□□ 2.96
RBFOX3-204ENST00000580508 EID1Q9Y6B2 187 aa33.56■■■□□ 2.96
RBFOX3-204ENST00000580508 XIRP1Q702N8 1843 aaKnown RBP33.56■■■□□ 2.96
RBFOX3-204ENST00000580508 IDI1Q13907 227 aa33.55■■■□□ 2.96
RBFOX3-204ENST00000580508 STAG3Q9UJ98 1225 aa33.49■■■□□ 2.95
RBFOX3-204ENST00000580508 ANKRD50Q9ULJ7 1429 aa33.49■■■□□ 2.95
RBFOX3-204ENST00000580508 FAM50AQ14320 339 aaKnown RBP33.48■■■□□ 2.95
RBFOX3-204ENST00000580508 TET3O43151 1660 aa33.48■■■□□ 2.95
RBFOX3-204ENST00000580508 ADGRB3O60242 1522 aa33.48■■■□□ 2.95
RBFOX3-204ENST00000580508 RPRD2Q5VT52 1461 aaKnown RBP33.46■■■□□ 2.95
RBFOX3-204ENST00000580508 SLC52A1Q9NWF4 448 aa33.43■■■□□ 2.94
RBFOX3-204ENST00000580508 UNC13BO14795 1591 aa33.38■■■□□ 2.93
RBFOX3-204ENST00000580508 GCC2Q8IWJ2 1684 aa33.37■■■□□ 2.93
RBFOX3-204ENST00000580508 MYO5BQ9ULV0 1848 aa33.37■■■□□ 2.93
RBFOX3-204ENST00000580508 KCNA6P17658 529 aa33.36■■■□□ 2.93
RBFOX3-204ENST00000580508 NWD1Q149M9 1564 aa33.34■■■□□ 2.93
RBFOX3-204ENST00000580508 SLC26A8Q96RN1 970 aa33.33■■■□□ 2.93
RBFOX3-204ENST00000580508 TMEM94Q12767 1356 aa33.33■■■□□ 2.93
RBFOX3-204ENST00000580508 ZFYVE9O95405 1425 aa33.32■■■□□ 2.92
RBFOX3-204ENST00000580508 TMEM131LA2VDJ0 1609 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms