RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 NCOA1Q15788 1441 aa28.65■■■□□ 2.18
NEK4P2-201ENST00000580004 PPARGC1BQ86YN6 1023 aaKnown RBP28.64■■■□□ 2.18
NEK4P2-201ENST00000580004 RRBP1Q9P2E9 1410 aaKnown RBP28.63■■■□□ 2.17
NEK4P2-201ENST00000580004 KDM5DQ9BY66 1539 aa28.62■■■□□ 2.17
NEK4P2-201ENST00000580004 ZC3H13Q5T200 1668 aaKnown RBP28.61■■■□□ 2.17
NEK4P2-201ENST00000580004 PREX1Q8TCU6 1659 aa28.6■■■□□ 2.17
NEK4P2-201ENST00000580004 ZMYM3Q14202 1370 aa28.59■■■□□ 2.17
NEK4P2-201ENST00000580004 RRP7BPQ9NSQ0 103 aa28.58■■■□□ 2.17
NEK4P2-201ENST00000580004 NPATQ14207 1427 aa28.58■■■□□ 2.17
NEK4P2-201ENST00000580004 ROCK1Q13464 1354 aa28.57■■■□□ 2.16
NEK4P2-201ENST00000580004 DEPDC5O75140 1603 aa28.56■■■□□ 2.16
NEK4P2-201ENST00000580004 CHIC2Q9UKJ5 165 aa28.56■■■□□ 2.16
NEK4P2-201ENST00000580004 MROH1Q8NDA8 1641 aa28.55■■■□□ 2.16
NEK4P2-201ENST00000580004 LMTK3Q96Q04 1460 aa28.55■■■□□ 2.16
NEK4P2-201ENST00000580004 CEBPAP49715 358 aaPredicted RBP28.55■■■□□ 2.16
NEK4P2-201ENST00000580004 PRDM15P57071 1507 aaPredicted RBP28.54■■■□□ 2.16
NEK4P2-201ENST00000580004 PTPRKQ15262 1439 aa28.52■■■□□ 2.16
NEK4P2-201ENST00000580004 WASHC2CQ9Y4E1 1318 aa28.52■■■□□ 2.16
NEK4P2-201ENST00000580004 PLPPR3Q6T4P5 718 aa28.51■■■□□ 2.15
NEK4P2-201ENST00000580004 ABCC3O15438 1527 aa28.48■■■□□ 2.15
NEK4P2-201ENST00000580004 UHRF1BP1Q6BDS2 1440 aa28.48■■■□□ 2.15
NEK4P2-201ENST00000580004 PZPP20742 1482 aa28.47■■■□□ 2.15
NEK4P2-201ENST00000580004 ANKRD50Q9ULJ7 1429 aa28.47■■■□□ 2.15
NEK4P2-201ENST00000580004 CEP152O94986 1710 aa28.43■■■□□ 2.14
NEK4P2-201ENST00000580004 KANK1Q14678 1352 aa28.43■■■□□ 2.14
NEK4P2-201ENST00000580004 CAMSAP1Q5T5Y3 1602 aa28.42■■■□□ 2.14
NEK4P2-201ENST00000580004 VWDEQ8N2E2 1590 aa28.41■■■□□ 2.14
NEK4P2-201ENST00000580004 LMTK2Q8IWU2 1503 aa28.39■■■□□ 2.14
NEK4P2-201ENST00000580004 ZNF142P52746 1687 aaPredicted RBP28.39■■■□□ 2.14
NEK4P2-201ENST00000580004 ARHGAP31Q2M1Z3 1444 aa28.38■■■□□ 2.13
NEK4P2-201ENST00000580004 MYO3AQ8NEV4 1616 aa28.38■■■□□ 2.13
NEK4P2-201ENST00000580004 ITGAEP38570 1179 aa28.37■■■□□ 2.13
NEK4P2-201ENST00000580004 UNC13BO14795 1591 aa28.36■■■□□ 2.13
NEK4P2-201ENST00000580004 SPATA31D1Q6ZQQ2 1576 aa28.33■■■□□ 2.13
NEK4P2-201ENST00000580004 TNRQ92752 1358 aa28.31■■■□□ 2.12
NEK4P2-201ENST00000580004 CEP170BQ9Y4F5 1589 aaPredicted RBP28.31■■■□□ 2.12
NEK4P2-201ENST00000580004 GCC2Q8IWJ2 1684 aa28.31■■■□□ 2.12
NEK4P2-201ENST00000580004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.12
NEK4P2-201ENST00000580004 ERVK-7P63135 1459 aa28.28■■■□□ 2.12
NEK4P2-201ENST00000580004 NLRP1Q9C000 1473 aa28.28■■■□□ 2.12
NEK4P2-201ENST00000580004 HSPA2P54652 639 aa28.28■■■□□ 2.12
NEK4P2-201ENST00000580004 EFCAB6Q5THR3 1501 aa28.28■■■□□ 2.12
NEK4P2-201ENST00000580004 A2ML1A8K2U0 1454 aa28.27■■■□□ 2.12
NEK4P2-201ENST00000580004 FBXO31Q5XUX0 539 aaPredicted RBP28.27■■■□□ 2.12
NEK4P2-201ENST00000580004 TET3O43151 1660 aa28.26■■■□□ 2.12
NEK4P2-201ENST00000580004 HFM1A2PYH4 1435 aa28.26■■■□□ 2.11
NEK4P2-201ENST00000580004 NAIPQ13075 1403 aa28.25■■■□□ 2.11
NEK4P2-201ENST00000580004 IQGAP3Q86VI3 1631 aa28.25■■■□□ 2.11
NEK4P2-201ENST00000580004 RPRD2Q5VT52 1461 aaKnown RBP28.24■■■□□ 2.11
NEK4P2-201ENST00000580004 CFAP65Q6ZU64 1925 aaKnown RBP28.23■■■□□ 2.11
NEK4P2-201ENST00000580004 STRCQ7RTU9 1775 aa28.21■■■□□ 2.11
NEK4P2-201ENST00000580004 PLA2R1Q13018 1463 aa28.21■■■□□ 2.11
NEK4P2-201ENST00000580004 DMRT2Q9Y5R5 561 aa28.17■■■□□ 2.1
NEK4P2-201ENST00000580004 UGGT1Q9NYU2 1555 aa28.15■■■□□ 2.1
NEK4P2-201ENST00000580004 NUP155O75694 1391 aa28.14■■■□□ 2.1
NEK4P2-201ENST00000580004 NOS1P29475 1434 aa28.14■■■□□ 2.1
NEK4P2-201ENST00000580004 KDM5AP29375 1690 aaKnown RBP28.13■■■□□ 2.09
NEK4P2-201ENST00000580004 E9PCH4 1651 aa28.1■■■□□ 2.09
NEK4P2-201ENST00000580004 THEMISQ8N1K5 641 aaPredicted RBP28.1■■■□□ 2.09
NEK4P2-201ENST00000580004 PTPRTO14522 1441 aa28.09■■■□□ 2.09
NEK4P2-201ENST00000580004 PKD2Q13563 968 aa28.09■■■□□ 2.09
NEK4P2-201ENST00000580004 ACIN1Q9UKV3 1341 aaKnown RBP28.09■■■□□ 2.09
NEK4P2-201ENST00000580004 UBR1Q8IWV7 1749 aa28.09■■■□□ 2.09
NEK4P2-201ENST00000580004 SYNMO15061 1565 aa28.08■■■□□ 2.09
NEK4P2-201ENST00000580004 POLR1AO95602 1720 aaPredicted RBP28.06■■■□□ 2.08
NEK4P2-201ENST00000580004 SLC52A1Q9NWF4 448 aa28.05■■■□□ 2.08
NEK4P2-201ENST00000580004 PIK3C2BO00750 1634 aa28.03■■■□□ 2.08
NEK4P2-201ENST00000580004 SLIT1O75093 1534 aa27.98■■■□□ 2.07
NEK4P2-201ENST00000580004 IDI1Q13907 227 aa27.97■■■□□ 2.07
NEK4P2-201ENST00000580004 ANKLE2Q86XL3 938 aa27.97■■■□□ 2.07
NEK4P2-201ENST00000580004 SPHKAPQ2M3C7 1700 aa27.97■■■□□ 2.07
NEK4P2-201ENST00000580004 ADGRB3O60242 1522 aa27.97■■■□□ 2.07
NEK4P2-201ENST00000580004 MED14O60244 1454 aa27.95■■■□□ 2.07
NEK4P2-201ENST00000580004 ARHGAP23Q9P227 1491 aa27.95■■■□□ 2.07
NEK4P2-201ENST00000580004 SETD5Q9C0A6 1442 aa27.95■■■□□ 2.07
NEK4P2-201ENST00000580004 NEURL4Q96JN8 1562 aa27.94■■■□□ 2.06
NEK4P2-201ENST00000580004 NCKAP5LQ9HCH0 1330 aa27.94■■■□□ 2.06
NEK4P2-201ENST00000580004 TRIM52Q96A61 297 aa27.92■■■□□ 2.06
NEK4P2-201ENST00000580004 STAG3Q9UJ98 1225 aa27.92■■■□□ 2.06
NEK4P2-201ENST00000580004 TMEM2Q9UHN6 1383 aa27.89■■■□□ 2.06
NEK4P2-201ENST00000580004 TMEM131LA2VDJ0 1609 aa27.89■■■□□ 2.05
NEK4P2-201ENST00000580004 SCAF11Q99590 1463 aaKnown RBP27.88■■■□□ 2.05
NEK4P2-201ENST00000580004 IQGAP1P46940 1657 aa27.87■■■□□ 2.05
NEK4P2-201ENST00000580004 TRPM2O94759 1503 aa27.87■■■□□ 2.05
NEK4P2-201ENST00000580004 NPHP4O75161 1426 aaPredicted RBP27.86■■■□□ 2.05
NEK4P2-201ENST00000580004 SLC4A1APQ9BWU0 796 aaKnown RBP27.86■■■□□ 2.05
NEK4P2-201ENST00000580004 MYO5BQ9ULV0 1848 aa27.85■■■□□ 2.05
NEK4P2-201ENST00000580004 EID1Q9Y6B2 187 aa27.84■■■□□ 2.05
NEK4P2-201ENST00000580004 HRCP23327 699 aa27.83■■■□□ 2.05
NEK4P2-201ENST00000580004 RAB3GAP2Q9H2M9 1393 aa27.82■■■□□ 2.04
NEK4P2-201ENST00000580004 TXNDC2Q86VQ3 553 aa27.8■■■□□ 2.04
NEK4P2-201ENST00000580004 HDGFP51858 240 aaKnown RBP27.79■■■□□ 2.04
NEK4P2-201ENST00000580004 LTBP4Q8N2S1 1624 aa27.78■■■□□ 2.04
NEK4P2-201ENST00000580004 KIF1BO60333 1816 aa27.77■■■□□ 2.04
NEK4P2-201ENST00000580004 LTKP29376 864 aa27.77■■■□□ 2.04
NEK4P2-201ENST00000580004 CLTCL1P53675 1640 aa27.77■■■□□ 2.04
NEK4P2-201ENST00000580004 ZFYVE9O95405 1425 aa27.76■■■□□ 2.04
NEK4P2-201ENST00000580004 MPHOSPH9Q99550 1183 aa27.76■■■□□ 2.03
NEK4P2-201ENST00000580004 IQSEC2Q5JU85 1478 aa27.73■■■□□ 2.03
NEK4P2-201ENST00000580004 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms