RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 PLXNC1O60486 1568 aa10.82□□□□□ -0.68
CCDC178-209ENST00000579947 COL16A1Q07092 1604 aaPredicted RBP10.81□□□□□ -0.68
CCDC178-209ENST00000579947 SPATA31A6Q5VVP1 1343 aa10.81□□□□□ -0.68
CCDC178-209ENST00000579947 KIF14Q15058 1648 aa10.8□□□□□ -0.68
CCDC178-209ENST00000579947 SHPRHQ149N8 1683 aa10.8□□□□□ -0.68
CCDC178-209ENST00000579947 FGD6Q6ZV73 1430 aa10.79□□□□□ -0.68
CCDC178-209ENST00000579947 TNRQ92752 1358 aa10.79□□□□□ -0.68
CCDC178-209ENST00000579947 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
CCDC178-209ENST00000579947 ATP7AQ04656 1500 aa10.78□□□□□ -0.68
CCDC178-209ENST00000579947 THEMISQ8N1K5 641 aaPredicted RBP10.78□□□□□ -0.68
CCDC178-209ENST00000579947 CDC42BPBQ9Y5S2 1711 aa10.77□□□□□ -0.68
CCDC178-209ENST00000579947 UGGT1Q9NYU2 1555 aa10.77□□□□□ -0.68
CCDC178-209ENST00000579947 FAM135AQ9P2D6 1515 aa10.77□□□□□ -0.68
CCDC178-209ENST00000579947 NLRP1Q9C000 1473 aa10.77□□□□□ -0.68
CCDC178-209ENST00000579947 MEX3CQ5U5Q3 659 aaKnown RBP10.77□□□□□ -0.69
CCDC178-209ENST00000579947 PRXQ9BXM0 1461 aa10.77□□□□□ -0.69
CCDC178-209ENST00000579947 NHSL1Q5SYE7 1610 aa10.77□□□□□ -0.69
CCDC178-209ENST00000579947 SAMD9LQ8IVG5 1584 aa10.76□□□□□ -0.69
CCDC178-209ENST00000579947 MAP3K1Q13233 1512 aa10.75□□□□□ -0.69
CCDC178-209ENST00000579947 PREX2Q70Z35 1606 aa10.74□□□□□ -0.69
CCDC178-209ENST00000579947 PZPP20742 1482 aa10.74□□□□□ -0.69
CCDC178-209ENST00000579947 NWD1Q149M9 1564 aa10.72□□□□□ -0.69
CCDC178-209ENST00000579947 NUTM2BA6NNL0 878 aaPredicted RBP10.71□□□□□ -0.69
CCDC178-209ENST00000579947 NUTM2EB1AL46 878 aaPredicted RBP10.71□□□□□ -0.69
CCDC178-209ENST00000579947 NUTM2DQ5VT03 806 aaPredicted RBP10.71□□□□□ -0.69
CCDC178-209ENST00000579947 NUTM2AQ8IVF1 878 aaPredicted RBP10.71□□□□□ -0.69
CCDC178-209ENST00000579947 A2MP01023 1474 aa10.71□□□□□ -0.69
CCDC178-209ENST00000579947 INO80Q9ULG1 1556 aaPredicted RBP10.71□□□□□ -0.7
CCDC178-209ENST00000579947 CCDC125Q86Z20 511 aa10.71□□□□□ -0.7
CCDC178-209ENST00000579947 YY1P25490 414 aa10.7□□□□□ -0.7
CCDC178-209ENST00000579947 RBM6P78332 1123 aaKnown RBP10.7□□□□□ -0.7
CCDC178-209ENST00000579947 AHDC1Q5TGY3 1603 aaPredicted RBP10.69□□□□□ -0.7
CCDC178-209ENST00000579947 SRCAPQ6ZRS2 3230 aa10.69□□□□□ -0.7
CCDC178-209ENST00000579947 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
CCDC178-209ENST00000579947 TMEM94Q12767 1356 aa10.68□□□□□ -0.7
CCDC178-209ENST00000579947 MIA2Q96PC5 1412 aa10.68□□□□□ -0.7
CCDC178-209ENST00000579947 TIAM1Q13009 1591 aa10.68□□□□□ -0.7
CCDC178-209ENST00000579947 AFF2P51816 1311 aa10.68□□□□□ -0.7
CCDC178-209ENST00000579947 ABCC3O15438 1527 aa10.67□□□□□ -0.7
CCDC178-209ENST00000579947 DIP2AQ14689 1571 aa10.67□□□□□ -0.7
CCDC178-209ENST00000579947 SCAF11Q99590 1463 aaKnown RBP10.66□□□□□ -0.7
CCDC178-209ENST00000579947 FBXO31Q5XUX0 539 aaPredicted RBP10.66□□□□□ -0.7
CCDC178-209ENST00000579947 GGT6Q6P531 493 aa10.66□□□□□ -0.7
CCDC178-209ENST00000579947 TROQ12816 1431 aaPredicted RBP10.66□□□□□ -0.7
CCDC178-209ENST00000579947 UBR1Q8IWV7 1749 aa10.64□□□□□ -0.71
CCDC178-209ENST00000579947 PRDM15P57071 1507 aaPredicted RBP10.64□□□□□ -0.71
CCDC178-209ENST00000579947 CLIP1P30622 1438 aa10.64□□□□□ -0.71
CCDC178-209ENST00000579947 KDM5AP29375 1690 aaKnown RBP10.63□□□□□ -0.71
CCDC178-209ENST00000579947 ARHGAP23Q9P227 1491 aa10.63□□□□□ -0.71
CCDC178-209ENST00000579947 SPAG9O60271 1321 aaKnown RBP10.63□□□□□ -0.71
CCDC178-209ENST00000579947 QTRT2Q9H974 415 aaKnown RBP10.63□□□□□ -0.71
CCDC178-209ENST00000579947 SLIT1O75093 1534 aa10.62□□□□□ -0.71
CCDC178-209ENST00000579947 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
CCDC178-209ENST00000579947 SLAIN2Q9P270 581 aa10.62□□□□□ -0.71
CCDC178-209ENST00000579947 NKTRP30414 1462 aaKnown RBP10.62□□□□□ -0.71
CCDC178-209ENST00000579947 NGLY1Q96IV0 654 aa10.62□□□□□ -0.71
CCDC178-209ENST00000579947 SENP3-EIF4A1A0A087X0R7 540 aa10.61□□□□□ -0.71
CCDC178-209ENST00000579947 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
CCDC178-209ENST00000579947 CDC42BPAQ5VT25 1732 aa10.61□□□□□ -0.71
CCDC178-209ENST00000579947 MSH6P52701 1360 aa10.61□□□□□ -0.71
CCDC178-209ENST00000579947 BCL9LQ86UU0 1499 aa10.6□□□□□ -0.71
CCDC178-209ENST00000579947 SYCP2Q9BX26 1530 aa10.6□□□□□ -0.71
CCDC178-209ENST00000579947 KCNA6P17658 529 aa10.58□□□□□ -0.72
CCDC178-209ENST00000579947 BLMP54132 1417 aaPredicted RBP10.57□□□□□ -0.72
CCDC178-209ENST00000579947 NCOA2Q15596 1464 aa10.57□□□□□ -0.72
CCDC178-209ENST00000579947 PROSER2Q86WR7 435 aaPredicted RBP10.56□□□□□ -0.72
CCDC178-209ENST00000579947 HRCP23327 699 aa10.56□□□□□ -0.72
CCDC178-209ENST00000579947 KIAA1107Q9UPP5 1409 aa10.55□□□□□ -0.72
CCDC178-209ENST00000579947 UNC13BO14795 1591 aa10.54□□□□□ -0.72
CCDC178-209ENST00000579947 LTKP29376 864 aa10.54□□□□□ -0.72
CCDC178-209ENST00000579947 CAMSAP2Q08AD1 1489 aa10.54□□□□□ -0.72
CCDC178-209ENST00000579947 PLEKHH2Q8IVE3 1493 aa10.53□□□□□ -0.72
CCDC178-209ENST00000579947 SETD5Q9C0A6 1442 aa10.53□□□□□ -0.72
CCDC178-209ENST00000579947 ERVK-7P63135 1459 aa10.53□□□□□ -0.72
CCDC178-209ENST00000579947 LRRIQ1Q96JM4 1722 aa10.53□□□□□ -0.72
CCDC178-209ENST00000579947 TET3O43151 1660 aa10.52□□□□□ -0.72
CCDC178-209ENST00000579947 GPATCH8Q9UKJ3 1502 aaKnown RBP10.52□□□□□ -0.73
CCDC178-209ENST00000579947 MROH1Q8NDA8 1641 aa10.52□□□□□ -0.73
CCDC178-209ENST00000579947 ATRNO75882 1429 aa10.52□□□□□ -0.73
CCDC178-209ENST00000579947 NCOA3Q9Y6Q9 1424 aa10.52□□□□□ -0.73
CCDC178-209ENST00000579947 TXNDC2Q86VQ3 553 aa10.52□□□□□ -0.73
CCDC178-209ENST00000579947 C8orf37Q96NL8 207 aa10.52□□□□□ -0.73
CCDC178-209ENST00000579947 DHX29Q7Z478 1369 aaKnown RBP10.52□□□□□ -0.73
CCDC178-209ENST00000579947 SPHKAPQ2M3C7 1700 aa10.5□□□□□ -0.73
CCDC178-209ENST00000579947 MAST1Q9Y2H9 1570 aa10.5□□□□□ -0.73
CCDC178-209ENST00000579947 C1QTNF8P60827 252 aa10.5□□□□□ -0.73
CCDC178-209ENST00000579947 RTEL1-TNFRSF6BF6WH68 1400 aa10.5□□□□□ -0.73
CCDC178-209ENST00000579947 TRPC5Q9UL62 973 aaPredicted RBP10.49□□□□□ -0.73
CCDC178-209ENST00000579947 WASHC2CQ9Y4E1 1318 aa10.49□□□□□ -0.73
CCDC178-209ENST00000579947 HNRNPMP52272 730 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCDC178-209ENST00000579947 EID1Q9Y6B2 187 aa10.48□□□□□ -0.73
CCDC178-209ENST00000579947 FMN1Q68DA7 1419 aa10.48□□□□□ -0.73
CCDC178-209ENST00000579947 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.48□□□□□ -0.73
CCDC178-209ENST00000579947 PSDA5PKW4 1024 aaPredicted RBP10.47□□□□□ -0.73
CCDC178-209ENST00000579947 DEFB132Q7Z7B7 95 aa10.47□□□□□ -0.73
CCDC178-209ENST00000579947 CHD2O14647 1828 aaKnown RBP10.46□□□□□ -0.73
CCDC178-209ENST00000579947 PNPLA6Q8IY17 1366 aa10.46□□□□□ -0.73
CCDC178-209ENST00000579947 ZNF784Q8NCA9 323 aaPredicted RBP10.45□□□□□ -0.74
CCDC178-209ENST00000579947 ASXL1Q8IXJ9 1541 aa10.45□□□□□ -0.74
CCDC178-209ENST00000579947 TMEM2Q9UHN6 1383 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms