RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 MBD5Q9P267 1494 aa19.73■□□□□ 0.75
CDK5RAP3-216ENST00000579853 TNRQ92752 1358 aa19.73■□□□□ 0.75
CDK5RAP3-216ENST00000579853 POLR1AO95602 1720 aaPredicted RBP19.73■□□□□ 0.75
CDK5RAP3-216ENST00000579853 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
CDK5RAP3-216ENST00000579853 ANKLE2Q86XL3 938 aa19.71■□□□□ 0.75
CDK5RAP3-216ENST00000579853 SHANK2Q9UPX8 1470 aa19.71■□□□□ 0.75
CDK5RAP3-216ENST00000579853 ZNF644Q9H582 1327 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-216ENST00000579853 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
CDK5RAP3-216ENST00000579853 HSPA1LP34931 641 aa19.7■□□□□ 0.74
CDK5RAP3-216ENST00000579853 RSPH4AQ5TD94 716 aa19.7■□□□□ 0.74
CDK5RAP3-216ENST00000579853 THEMISQ8N1K5 641 aaPredicted RBP19.7■□□□□ 0.74
CDK5RAP3-216ENST00000579853 PZPP20742 1482 aa19.7■□□□□ 0.74
CDK5RAP3-216ENST00000579853 EHBP1L1Q8N3D4 1523 aa19.7■□□□□ 0.74
CDK5RAP3-216ENST00000579853 KIF3BO15066 747 aa19.69■□□□□ 0.74
CDK5RAP3-216ENST00000579853 PIP4K2BP78356 416 aa19.69■□□□□ 0.74
CDK5RAP3-216ENST00000579853 KDM5DQ9BY66 1539 aa19.69■□□□□ 0.74
CDK5RAP3-216ENST00000579853 WASHC2CQ9Y4E1 1318 aa19.69■□□□□ 0.74
CDK5RAP3-216ENST00000579853 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
CDK5RAP3-216ENST00000579853 NEURL4Q96JN8 1562 aa19.67■□□□□ 0.74
CDK5RAP3-216ENST00000579853 FBXO31Q5XUX0 539 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-216ENST00000579853 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
CDK5RAP3-216ENST00000579853 MED1Q15648 1581 aaPredicted RBP19.66■□□□□ 0.74
CDK5RAP3-216ENST00000579853 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
CDK5RAP3-216ENST00000579853 MIA2Q96PC5 1412 aa19.65■□□□□ 0.74
CDK5RAP3-216ENST00000579853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.64■□□□□ 0.73
CDK5RAP3-216ENST00000579853 MED14O60244 1454 aa19.64■□□□□ 0.73
CDK5RAP3-216ENST00000579853 UGGT1Q9NYU2 1555 aa19.63■□□□□ 0.73
CDK5RAP3-216ENST00000579853 DEPDC5O75140 1603 aa19.62■□□□□ 0.73
CDK5RAP3-216ENST00000579853 NPHP4O75161 1426 aaPredicted RBP19.61■□□□□ 0.73
CDK5RAP3-216ENST00000579853 VWDEQ8N2E2 1590 aa19.61■□□□□ 0.73
CDK5RAP3-216ENST00000579853 TSPY4P0CV99 314 aa19.6■□□□□ 0.73
CDK5RAP3-216ENST00000579853 TSPY10P0CW01 314 aa19.6■□□□□ 0.73
CDK5RAP3-216ENST00000579853 CAMSAP2Q08AD1 1489 aa19.59■□□□□ 0.73
CDK5RAP3-216ENST00000579853 IQGAP1P46940 1657 aa19.56■□□□□ 0.72
CDK5RAP3-216ENST00000579853 NCOA2Q15596 1464 aa19.55■□□□□ 0.72
CDK5RAP3-216ENST00000579853 ARHGEF5Q12774 1597 aa19.55■□□□□ 0.72
CDK5RAP3-216ENST00000579853 ZC3H13Q5T200 1668 aaKnown RBP19.52■□□□□ 0.71
CDK5RAP3-216ENST00000579853 SYNMO15061 1565 aa19.51■□□□□ 0.71
CDK5RAP3-216ENST00000579853 RNF17Q9BXT8 1623 aaKnown RBP19.51■□□□□ 0.71
CDK5RAP3-216ENST00000579853 ALKQ9UM73 1620 aa19.51■□□□□ 0.71
CDK5RAP3-216ENST00000579853 LRRC7Q96NW7 1537 aa19.5■□□□□ 0.71
CDK5RAP3-216ENST00000579853 ABCC3O15438 1527 aa19.48■□□□□ 0.71
CDK5RAP3-216ENST00000579853 ERVK-7P63135 1459 aa19.47■□□□□ 0.71
CDK5RAP3-216ENST00000579853 EIF2AK4Q9P2K8 1649 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP3-216ENST00000579853 MAST1Q9Y2H9 1570 aa19.45■□□□□ 0.7
CDK5RAP3-216ENST00000579853 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
CDK5RAP3-216ENST00000579853 SCAF11Q99590 1463 aaKnown RBP19.43■□□□□ 0.7
CDK5RAP3-216ENST00000579853 UBR1Q8IWV7 1749 aa19.41■□□□□ 0.7
CDK5RAP3-216ENST00000579853 EID1Q9Y6B2 187 aa19.4■□□□□ 0.7
CDK5RAP3-216ENST00000579853 CFAP65Q6ZU64 1925 aaKnown RBP19.39■□□□□ 0.7
CDK5RAP3-216ENST00000579853 TXNDC2Q86VQ3 553 aa19.39■□□□□ 0.69
CDK5RAP3-216ENST00000579853 SLIT1O75093 1534 aa19.39■□□□□ 0.69
CDK5RAP3-216ENST00000579853 ARHGAP31Q2M1Z3 1444 aa19.38■□□□□ 0.69
CDK5RAP3-216ENST00000579853 ARHGAP23Q9P227 1491 aa19.38■□□□□ 0.69
CDK5RAP3-216ENST00000579853 MROH1Q8NDA8 1641 aa19.37■□□□□ 0.69
CDK5RAP3-216ENST00000579853 DUOX2Q9NRD8 1548 aa19.37■□□□□ 0.69
CDK5RAP3-216ENST00000579853 LRRC9Q6ZRR7 1453 aa19.37■□□□□ 0.69
CDK5RAP3-216ENST00000579853 MYOM3Q5VTT5 1437 aa19.36■□□□□ 0.69
CDK5RAP3-216ENST00000579853 LTKP29376 864 aa19.36■□□□□ 0.69
CDK5RAP3-216ENST00000579853 CEP152O94986 1710 aa19.36■□□□□ 0.69
CDK5RAP3-216ENST00000579853 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
CDK5RAP3-216ENST00000579853 PRDM15P57071 1507 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-216ENST00000579853 RGS17Q9UGC6 210 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-216ENST00000579853 STAG3Q9UJ98 1225 aa19.31■□□□□ 0.68
CDK5RAP3-216ENST00000579853 VPS8Q8N3P4 1428 aa19.31■□□□□ 0.68
CDK5RAP3-216ENST00000579853 ERBINQ96RT1 1412 aa19.31■□□□□ 0.68
CDK5RAP3-216ENST00000579853 TMEM2Q9UHN6 1383 aa19.31■□□□□ 0.68
CDK5RAP3-216ENST00000579853 MAP3K1Q13233 1512 aa19.3■□□□□ 0.68
CDK5RAP3-216ENST00000579853 XIRP1Q702N8 1843 aaKnown RBP19.3■□□□□ 0.68
CDK5RAP3-216ENST00000579853 KIF15Q9NS87 1388 aa19.3■□□□□ 0.68
CDK5RAP3-216ENST00000579853 KANK1Q14678 1352 aa19.29■□□□□ 0.68
CDK5RAP3-216ENST00000579853 KDM5AP29375 1690 aaKnown RBP19.28■□□□□ 0.68
CDK5RAP3-216ENST00000579853 KCNA6P17658 529 aa19.27■□□□□ 0.68
CDK5RAP3-216ENST00000579853 TMEM94Q12767 1356 aa19.27■□□□□ 0.68
CDK5RAP3-216ENST00000579853 PIK3C2BO00750 1634 aa19.25■□□□□ 0.67
CDK5RAP3-216ENST00000579853 EFCAB6Q5THR3 1501 aa19.25■□□□□ 0.67
CDK5RAP3-216ENST00000579853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.24■□□□□ 0.678e-9■■□□□ 13.5
CDK5RAP3-216ENST00000579853 KANK4Q5T7N3 995 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-216ENST00000579853 PROSER2Q86WR7 435 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-216ENST00000579853 RRP7BPQ9NSQ0 103 aa19.23■□□□□ 0.67
CDK5RAP3-216ENST00000579853 IDI1Q13907 227 aa19.21■□□□□ 0.67
CDK5RAP3-216ENST00000579853 NKTRP30414 1462 aaKnown RBP19.21■□□□□ 0.67
CDK5RAP3-216ENST00000579853 CROCC2H7BZ55 1655 aa19.2■□□□□ 0.66
CDK5RAP3-216ENST00000579853 ROBO1Q9Y6N7 1651 aa19.2■□□□□ 0.66
CDK5RAP3-216ENST00000579853 LMTK2Q8IWU2 1503 aa19.2■□□□□ 0.66
CDK5RAP3-216ENST00000579853 ABCC5O15440 1437 aa19.2■□□□□ 0.66
CDK5RAP3-216ENST00000579853 POTEAQ6S8J7 498 aa19.2■□□□□ 0.66
CDK5RAP3-216ENST00000579853 SLC26A8Q96RN1 970 aa19.19■□□□□ 0.66
CDK5RAP3-216ENST00000579853 TET3O43151 1660 aa19.19■□□□□ 0.66
CDK5RAP3-216ENST00000579853 SLC52A1Q9NWF4 448 aa19.18■□□□□ 0.66
CDK5RAP3-216ENST00000579853 MSH6P52701 1360 aa19.18■□□□□ 0.66
CDK5RAP3-216ENST00000579853 ANKRD30AQ9BXX3 1397 aa19.17■□□□□ 0.66
CDK5RAP3-216ENST00000579853 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
CDK5RAP3-216ENST00000579853 DAPK1P53355 1430 aa19.16■□□□□ 0.66
CDK5RAP3-216ENST00000579853 BCANQ96GW7 911 aa19.15■□□□□ 0.66
CDK5RAP3-216ENST00000579853 SLAIN2Q9P270 581 aa19.15■□□□□ 0.66
CDK5RAP3-216ENST00000579853 NOS1P29475 1434 aa19.15■□□□□ 0.66
CDK5RAP3-216ENST00000579853 NWD1Q149M9 1564 aa19.15■□□□□ 0.66
CDK5RAP3-216ENST00000579853 HDGFP51858 240 aaKnown RBP19.14■□□□□ 0.65
CDK5RAP3-216ENST00000579853 APLP2Q06481 763 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms