RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 FGD6Q6ZV73 1430 aa31.83■■■□□ 2.69
LIMD2-206ENST00000578993 ABCC5O15440 1437 aa31.82■■■□□ 2.68
LIMD2-206ENST00000578993 NCOA1Q15788 1441 aa31.82■■■□□ 2.68
LIMD2-206ENST00000578993 CAMSAP1Q5T5Y3 1602 aa31.82■■■□□ 2.68
LIMD2-206ENST00000578993 EIF2AK4Q9P2K8 1649 aaKnown RBP31.82■■■□□ 2.68
LIMD2-206ENST00000578993 TCOF1Q13428 1488 aaKnown RBP31.81■■■□□ 2.68
LIMD2-206ENST00000578993 CEP170BQ9Y4F5 1589 aaPredicted RBP31.81■■■□□ 2.68
LIMD2-206ENST00000578993 FBXO41Q8TF61 875 aa31.8■■■□□ 2.68
LIMD2-206ENST00000578993 DNMT1P26358 1616 aaKnown RBP31.79■■■□□ 2.68
LIMD2-206ENST00000578993 MROH1Q8NDA8 1641 aa31.78■■■□□ 2.68
LIMD2-206ENST00000578993 SHANK2Q9UPX8 1470 aa31.78■■■□□ 2.68
LIMD2-206ENST00000578993 PZPP20742 1482 aa31.77■■■□□ 2.68
LIMD2-206ENST00000578993 DMRT2Q9Y5R5 561 aa31.76■■■□□ 2.67
LIMD2-206ENST00000578993 PTPRTO14522 1441 aa31.75■■■□□ 2.67
LIMD2-206ENST00000578993 DUOX2Q9NRD8 1548 aa31.75■■■□□ 2.67
LIMD2-206ENST00000578993 DAPK1P53355 1430 aa31.75■■■□□ 2.67
LIMD2-206ENST00000578993 WASHC2CQ9Y4E1 1318 aa31.75■■■□□ 2.67
LIMD2-206ENST00000578993 FBXO31Q5XUX0 539 aaPredicted RBP31.74■■■□□ 2.67
LIMD2-206ENST00000578993 ABCC3O15438 1527 aa31.72■■■□□ 2.67
LIMD2-206ENST00000578993 ZC3H13Q5T200 1668 aaKnown RBP31.71■■■□□ 2.67
LIMD2-206ENST00000578993 CERKQ8TCT0 537 aa31.7■■■□□ 2.67
LIMD2-206ENST00000578993 CEP152O94986 1710 aa31.69■■■□□ 2.66
LIMD2-206ENST00000578993 A2ML1A8K2U0 1454 aa31.69■■■□□ 2.66
LIMD2-206ENST00000578993 KIF15Q9NS87 1388 aa31.68■■■□□ 2.66
LIMD2-206ENST00000578993 PLA2R1Q13018 1463 aa31.67■■■□□ 2.66
LIMD2-206ENST00000578993 TNRQ92752 1358 aa31.67■■■□□ 2.66
LIMD2-206ENST00000578993 NCKAP5LQ9HCH0 1330 aa31.65■■■□□ 2.66
LIMD2-206ENST00000578993 RRP7BPQ9NSQ0 103 aa31.64■■■□□ 2.66
LIMD2-206ENST00000578993 CFAP65Q6ZU64 1925 aaKnown RBP31.62■■■□□ 2.65
LIMD2-206ENST00000578993 ERBINQ96RT1 1412 aa31.62■■■□□ 2.65
LIMD2-206ENST00000578993 PRDM15P57071 1507 aaPredicted RBP31.61■■■□□ 2.65
LIMD2-206ENST00000578993 DEPDC5O75140 1603 aa31.6■■■□□ 2.65
LIMD2-206ENST00000578993 LTBP4Q8N2S1 1624 aa31.6■■■□□ 2.65
LIMD2-206ENST00000578993 SPATA31D1Q6ZQQ2 1576 aa31.59■■■□□ 2.65
LIMD2-206ENST00000578993 CHIC2Q9UKJ5 165 aa31.58■■■□□ 2.65
LIMD2-206ENST00000578993 PKD2Q13563 968 aa31.56■■■□□ 2.64
LIMD2-206ENST00000578993 POLR1AO95602 1720 aaPredicted RBP31.55■■■□□ 2.64
LIMD2-206ENST00000578993 NLRP1Q9C000 1473 aa31.54■■■□□ 2.64
LIMD2-206ENST00000578993 ANKRD30AQ9BXX3 1397 aa31.54■■■□□ 2.64
LIMD2-206ENST00000578993 ADGRL2O95490 1459 aa31.53■■■□□ 2.64
LIMD2-206ENST00000578993 ERVK-7P63135 1459 aa31.53■■■□□ 2.64
LIMD2-206ENST00000578993 NEURL4Q96JN8 1562 aa31.51■■■□□ 2.64
LIMD2-206ENST00000578993 FAM50AQ14320 339 aaKnown RBP31.51■■■□□ 2.63
LIMD2-206ENST00000578993 UGGT1Q9NYU2 1555 aa31.49■■■□□ 2.63
LIMD2-206ENST00000578993 VWDEQ8N2E2 1590 aa31.47■■■□□ 2.63
LIMD2-206ENST00000578993 ARHGAP31Q2M1Z3 1444 aa31.46■■■□□ 2.63
LIMD2-206ENST00000578993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.45■■■□□ 2.63
LIMD2-206ENST00000578993 ZNF335Q9H4Z2 1342 aaPredicted RBP31.45■■■□□ 2.62
LIMD2-206ENST00000578993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.44■■■□□ 2.62
LIMD2-206ENST00000578993 UBR1Q8IWV7 1749 aa31.42■■■□□ 2.62
LIMD2-206ENST00000578993 LMTK2Q8IWU2 1503 aa31.4■■■□□ 2.62
LIMD2-206ENST00000578993 PPARGC1BQ86YN6 1023 aaKnown RBP31.4■■■□□ 2.62
LIMD2-206ENST00000578993 THEMISQ8N1K5 641 aaPredicted RBP31.4■■■□□ 2.62
LIMD2-206ENST00000578993 IQSEC2Q5JU85 1478 aa31.36■■■□□ 2.61
LIMD2-206ENST00000578993 KANK1Q14678 1352 aa31.36■■■□□ 2.61
LIMD2-206ENST00000578993 MED14O60244 1454 aa31.34■■■□□ 2.61
LIMD2-206ENST00000578993 ANKRD50Q9ULJ7 1429 aa31.34■■■□□ 2.61
LIMD2-206ENST00000578993 ANKLE2Q86XL3 938 aa31.34■■■□□ 2.61
LIMD2-206ENST00000578993 EFCAB6Q5THR3 1501 aa31.32■■■□□ 2.6
LIMD2-206ENST00000578993 PIK3C2BO00750 1634 aa31.31■■■□□ 2.6
LIMD2-206ENST00000578993 IQGAP1P46940 1657 aa31.31■■■□□ 2.6
LIMD2-206ENST00000578993 NPHP4O75161 1426 aaPredicted RBP31.29■■■□□ 2.6
LIMD2-206ENST00000578993 SYNMO15061 1565 aa31.29■■■□□ 2.6
LIMD2-206ENST00000578993 UNC13BO14795 1591 aa31.26■■■□□ 2.59
LIMD2-206ENST00000578993 ROCK1Q13464 1354 aa31.25■■■□□ 2.59
LIMD2-206ENST00000578993 ARHGAP23Q9P227 1491 aa31.25■■■□□ 2.59
LIMD2-206ENST00000578993 SLIT1O75093 1534 aa31.24■■■□□ 2.59
LIMD2-206ENST00000578993 NOS1P29475 1434 aa31.24■■■□□ 2.59
LIMD2-206ENST00000578993 TET3O43151 1660 aa31.22■■■□□ 2.59
LIMD2-206ENST00000578993 KDM5AP29375 1690 aaKnown RBP31.22■■■□□ 2.59
LIMD2-206ENST00000578993 STRCP1A6NGW2 1772 aa31.21■■■□□ 2.59
LIMD2-206ENST00000578993 GCC2Q8IWJ2 1684 aa31.19■■■□□ 2.58
LIMD2-206ENST00000578993 LTKP29376 864 aa31.18■■■□□ 2.58
LIMD2-206ENST00000578993 SCAF11Q99590 1463 aaKnown RBP31.18■■■□□ 2.58
LIMD2-206ENST00000578993 CPS1P31327 1500 aa31.18■■■□□ 2.58
LIMD2-206ENST00000578993 ITGAEP38570 1179 aa31.17■■■□□ 2.58
LIMD2-206ENST00000578993 IDI1Q13907 227 aa31.17■■■□□ 2.58
LIMD2-206ENST00000578993 RPRD2Q5VT52 1461 aaKnown RBP31.15■■■□□ 2.58
LIMD2-206ENST00000578993 IQGAP3Q86VI3 1631 aa31.13■■■□□ 2.57
LIMD2-206ENST00000578993 E9PCH4 1651 aa31.13■■■□□ 2.57
LIMD2-206ENST00000578993 TMEM2Q9UHN6 1383 aa31.12■■■□□ 2.57
LIMD2-206ENST00000578993 RRBP1Q9P2E9 1410 aaKnown RBP31.12■■■□□ 2.57
LIMD2-206ENST00000578993 MYO5BQ9ULV0 1848 aa31.12■■■□□ 2.57
LIMD2-206ENST00000578993 ADGRB3O60242 1522 aa31.11■■■□□ 2.57
LIMD2-206ENST00000578993 TXNDC2Q86VQ3 553 aa31.11■■■□□ 2.57
LIMD2-206ENST00000578993 UBAP1LF5GYI3 381 aa31.08■■■□□ 2.57
LIMD2-206ENST00000578993 STAG3Q9UJ98 1225 aa31.05■■■□□ 2.56
LIMD2-206ENST00000578993 SLC52A1Q9NWF4 448 aa31.04■■■□□ 2.56
LIMD2-206ENST00000578993 EID1Q9Y6B2 187 aa31.03■■■□□ 2.56
LIMD2-206ENST00000578993 TMEM131LA2VDJ0 1609 aa31.02■■■□□ 2.56
LIMD2-206ENST00000578993 ALKQ9UM73 1620 aa31.02■■■□□ 2.56
LIMD2-206ENST00000578993 LRRC7Q96NW7 1537 aa31.01■■■□□ 2.55
LIMD2-206ENST00000578993 NUP155O75694 1391 aa31■■■□□ 2.55
LIMD2-206ENST00000578993 XIRP1Q702N8 1843 aaKnown RBP30.98■■■□□ 2.55
LIMD2-206ENST00000578993 ZFYVE9O95405 1425 aa30.95■■■□□ 2.54
LIMD2-206ENST00000578993 NAIPQ13075 1403 aa30.92■■■□□ 2.54
LIMD2-206ENST00000578993 SPHKAPQ2M3C7 1700 aa30.88■■■□□ 2.53
LIMD2-206ENST00000578993 TOM1O60784 492 aa30.88■■■□□ 2.53
LIMD2-206ENST00000578993 RIMS2Q9UQ26 1411 aa30.87■■■□□ 2.53
LIMD2-206ENST00000578993 PIP4K2BP78356 416 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms