RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 CLIP1P30622 1438 aa13.44□□□□□ -0.26
PPP4R1-211ENST00000578875 MIA2Q96PC5 1412 aa13.44□□□□□ -0.26
PPP4R1-211ENST00000578875 LTKP29376 864 aa13.42□□□□□ -0.26
PPP4R1-211ENST00000578875 CHIC1Q5VXU3 224 aa13.42□□□□□ -0.26
PPP4R1-211ENST00000578875 PLXNC1O60486 1568 aa13.41□□□□□ -0.26
PPP4R1-211ENST00000578875 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
PPP4R1-211ENST00000578875 KIF3BO15066 747 aa13.41□□□□□ -0.26
PPP4R1-211ENST00000578875 RXRBP28702 533 aa13.41□□□□□ -0.26
PPP4R1-211ENST00000578875 XIRP1Q702N8 1843 aaKnown RBP13.41□□□□□ -0.26
PPP4R1-211ENST00000578875 UGGT1Q9NYU2 1555 aa13.41□□□□□ -0.26
PPP4R1-211ENST00000578875 ATP7AQ04656 1500 aa13.4□□□□□ -0.26
PPP4R1-211ENST00000578875 DEPDC5O75140 1603 aa13.4□□□□□ -0.26
PPP4R1-211ENST00000578875 PREX2Q70Z35 1606 aa13.4□□□□□ -0.26
PPP4R1-211ENST00000578875 SYCP2Q9BX26 1530 aa13.39□□□□□ -0.27
PPP4R1-211ENST00000578875 FAM135AQ9P2D6 1515 aa13.39□□□□□ -0.27
PPP4R1-211ENST00000578875 ZNF772Q68DY9 489 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-211ENST00000578875 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
PPP4R1-211ENST00000578875 MEX3CQ5U5Q3 659 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-211ENST00000578875 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
PPP4R1-211ENST00000578875 TMEM94Q12767 1356 aa13.37□□□□□ -0.27
PPP4R1-211ENST00000578875 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
PPP4R1-211ENST00000578875 LRP6O75581 1613 aa13.37□□□□□ -0.27
PPP4R1-211ENST00000578875 FMN1Q68DA7 1419 aa13.37□□□□□ -0.27
PPP4R1-211ENST00000578875 PZPP20742 1482 aa13.36□□□□□ -0.27
PPP4R1-211ENST00000578875 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
PPP4R1-211ENST00000578875 JCADQ9P266 1359 aa13.36□□□□□ -0.27
PPP4R1-211ENST00000578875 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
PPP4R1-211ENST00000578875 SYNMO15061 1565 aa13.36□□□□□ -0.27
PPP4R1-211ENST00000578875 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-211ENST00000578875 SLAIN2Q9P270 581 aa13.35□□□□□ -0.27
PPP4R1-211ENST00000578875 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
PPP4R1-211ENST00000578875 CDC42BPAQ5VT25 1732 aa13.34□□□□□ -0.27
PPP4R1-211ENST00000578875 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
PPP4R1-211ENST00000578875 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
PPP4R1-211ENST00000578875 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.27
PPP4R1-211ENST00000578875 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
PPP4R1-211ENST00000578875 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
PPP4R1-211ENST00000578875 ZC3H13Q5T200 1668 aaKnown RBP13.32□□□□□ -0.28
PPP4R1-211ENST00000578875 NUTM2BA6NNL0 878 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-211ENST00000578875 NUTM2EB1AL46 878 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-211ENST00000578875 UBTFP17480 764 aaKnown RBP13.31□□□□□ -0.28
PPP4R1-211ENST00000578875 NUTM2DQ5VT03 806 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-211ENST00000578875 NUTM2AQ8IVF1 878 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-211ENST00000578875 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
PPP4R1-211ENST00000578875 SETBP1Q9Y6X0 1596 aa13.31□□□□□ -0.28
PPP4R1-211ENST00000578875 KIAA1107Q9UPP5 1409 aa13.3□□□□□ -0.28
PPP4R1-211ENST00000578875 KCNA6P17658 529 aa13.29□□□□□ -0.28
PPP4R1-211ENST00000578875 SLC26A8Q96RN1 970 aa13.29□□□□□ -0.28
PPP4R1-211ENST00000578875 SPATA31A6Q5VVP1 1343 aa13.28□□□□□ -0.28
PPP4R1-211ENST00000578875 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
PPP4R1-211ENST00000578875 PHLPP1O60346 1717 aa13.27□□□□□ -0.28
PPP4R1-211ENST00000578875 QTRT2Q9H974 415 aaKnown RBP13.27□□□□□ -0.29
PPP4R1-211ENST00000578875 AFF2P51816 1311 aa13.27□□□□□ -0.29
PPP4R1-211ENST00000578875 KDM5DQ9BY66 1539 aa13.27□□□□□ -0.29
PPP4R1-211ENST00000578875 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
PPP4R1-211ENST00000578875 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
PPP4R1-211ENST00000578875 ADGBQ8N7X0 1667 aa13.24□□□□□ -0.29
PPP4R1-211ENST00000578875 CDK12Q9NYV4 1490 aaPredicted RBP13.24□□□□□ -0.29
PPP4R1-211ENST00000578875 RGS12O14924 1447 aa13.24□□□□□ -0.29
PPP4R1-211ENST00000578875 EID1Q9Y6B2 187 aa13.23□□□□□ -0.29
PPP4R1-211ENST00000578875 MBD5Q9P267 1494 aa13.23□□□□□ -0.29
PPP4R1-211ENST00000578875 COL16A1Q07092 1604 aaPredicted RBP13.22□□□□□ -0.29
PPP4R1-211ENST00000578875 RBM6P78332 1123 aaKnown RBP13.22□□□□□ -0.29
PPP4R1-211ENST00000578875 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.29
PPP4R1-211ENST00000578875 PLEKHH2Q8IVE3 1493 aa13.21□□□□□ -0.3
PPP4R1-211ENST00000578875 ARHGAP23Q9P227 1491 aa13.21□□□□□ -0.3
PPP4R1-211ENST00000578875 MSH6P52701 1360 aa13.2□□□□□ -0.3
PPP4R1-211ENST00000578875 CFAP65Q6ZU64 1925 aaKnown RBP13.2□□□□□ -0.3
PPP4R1-211ENST00000578875 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
PPP4R1-211ENST00000578875 C8orf37Q96NL8 207 aa13.19□□□□□ -0.3
PPP4R1-211ENST00000578875 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
PPP4R1-211ENST00000578875 ERVK-7P63135 1459 aa13.18□□□□□ -0.3
PPP4R1-211ENST00000578875 LRRC9Q6ZRR7 1453 aa13.18□□□□□ -0.3
PPP4R1-211ENST00000578875 FGD6Q6ZV73 1430 aa13.18□□□□□ -0.3
PPP4R1-211ENST00000578875 CASKIN1Q8WXD9 1431 aa13.18□□□□□ -0.3
PPP4R1-211ENST00000578875 SLIT1O75093 1534 aa13.17□□□□□ -0.3
PPP4R1-211ENST00000578875 EEA1Q15075 1411 aa13.16□□□□□ -0.3
PPP4R1-211ENST00000578875 PRDM15P57071 1507 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-211ENST00000578875 TMEM2Q9UHN6 1383 aa13.16□□□□□ -0.3
PPP4R1-211ENST00000578875 CCDC18Q5T9S5 1454 aa13.16□□□□□ -0.3
PPP4R1-211ENST00000578875 BCANQ96GW7 911 aa13.14□□□□□ -0.31
PPP4R1-211ENST00000578875 ATAD2Q6PL18 1390 aa13.14□□□□□ -0.31
PPP4R1-211ENST00000578875 FOXD1Q16676 465 aa13.13□□□□□ -0.31
PPP4R1-211ENST00000578875 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
PPP4R1-211ENST00000578875 ABCC3O15438 1527 aa13.13□□□□□ -0.31
PPP4R1-211ENST00000578875 TET3O43151 1660 aa13.12□□□□□ -0.31
PPP4R1-211ENST00000578875 IDI1Q13907 227 aa13.12□□□□□ -0.31
PPP4R1-211ENST00000578875 DDX17Q92841 729 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-211ENST00000578875 BRINP3Q76B58 766 aa13.11□□□□□ -0.31
PPP4R1-211ENST00000578875 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
PPP4R1-211ENST00000578875 NGLY1Q96IV0 654 aa13.11□□□□□ -0.31
PPP4R1-211ENST00000578875 TIAM1Q13009 1591 aa13.11□□□□□ -0.31
PPP4R1-211ENST00000578875 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
PPP4R1-211ENST00000578875 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
PPP4R1-211ENST00000578875 SHPRHQ149N8 1683 aa13.09□□□□□ -0.31
PPP4R1-211ENST00000578875 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
PPP4R1-211ENST00000578875 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-211ENST00000578875 NKTRP30414 1462 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-211ENST00000578875 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-211ENST00000578875 TSPY4P0CV99 314 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms