RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
CDK5RAP3-209ENST00000578663 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-209ENST00000578663 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-209ENST00000578663 MYT1LQ9UL68 1186 aa12.07□□□□□ -0.48
CDK5RAP3-209ENST00000578663 CDC42BPBQ9Y5S2 1711 aa12.07□□□□□ -0.48
CDK5RAP3-209ENST00000578663 RGS12O14924 1447 aa12.06□□□□□ -0.48
CDK5RAP3-209ENST00000578663 RXRBP28702 533 aa12.06□□□□□ -0.48
CDK5RAP3-209ENST00000578663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDK5RAP3-209ENST00000578663 COL16A1Q07092 1604 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-209ENST00000578663 EP400Q96L91 3159 aa12.04□□□□□ -0.48
CDK5RAP3-209ENST00000578663 JCADQ9P266 1359 aa12.04□□□□□ -0.48
CDK5RAP3-209ENST00000578663 ANKLE2Q86XL3 938 aa12.03□□□□□ -0.48
CDK5RAP3-209ENST00000578663 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.49
CDK5RAP3-209ENST00000578663 PLXNC1O60486 1568 aa12.01□□□□□ -0.49
CDK5RAP3-209ENST00000578663 SAMD9LQ8IVG5 1584 aa12.01□□□□□ -0.49
CDK5RAP3-209ENST00000578663 SHPRHQ149N8 1683 aa12.01□□□□□ -0.49
CDK5RAP3-209ENST00000578663 LRRIQ1Q96JM4 1722 aa12□□□□□ -0.49
CDK5RAP3-209ENST00000578663 CCDC18Q5T9S5 1454 aa11.99□□□□□ -0.49
CDK5RAP3-209ENST00000578663 CDC42BPAQ5VT25 1732 aa11.98□□□□□ -0.49
CDK5RAP3-209ENST00000578663 UGGT1Q9NYU2 1555 aa11.97□□□□□ -0.49
CDK5RAP3-209ENST00000578663 INO80Q9ULG1 1556 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-209ENST00000578663 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-209ENST00000578663 ATP7AQ04656 1500 aa11.96□□□□□ -0.49
CDK5RAP3-209ENST00000578663 MAP3K1Q13233 1512 aa11.96□□□□□ -0.49
CDK5RAP3-209ENST00000578663 SYCP2Q9BX26 1530 aa11.96□□□□□ -0.5
CDK5RAP3-209ENST00000578663 KDM5DQ9BY66 1539 aa11.96□□□□□ -0.5
CDK5RAP3-209ENST00000578663 TNRQ92752 1358 aa11.95□□□□□ -0.5
CDK5RAP3-209ENST00000578663 SPATA31A6Q5VVP1 1343 aa11.95□□□□□ -0.5
CDK5RAP3-209ENST00000578663 FOXD1Q16676 465 aa11.95□□□□□ -0.5
CDK5RAP3-209ENST00000578663 A2MP01023 1474 aa11.95□□□□□ -0.5
CDK5RAP3-209ENST00000578663 LRRC9Q6ZRR7 1453 aa11.95□□□□□ -0.5
CDK5RAP3-209ENST00000578663 PLEKHH2Q8IVE3 1493 aa11.95□□□□□ -0.5
CDK5RAP3-209ENST00000578663 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-209ENST00000578663 NUTM2BA6NNL0 878 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-209ENST00000578663 NUTM2EB1AL46 878 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-209ENST00000578663 MEX3CQ5U5Q3 659 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-209ENST00000578663 NUTM2DQ5VT03 806 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-209ENST00000578663 NUTM2AQ8IVF1 878 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-209ENST00000578663 KIAA1107Q9UPP5 1409 aa11.94□□□□□ -0.5
CDK5RAP3-209ENST00000578663 FAM135AQ9P2D6 1515 aa11.93□□□□□ -0.5
CDK5RAP3-209ENST00000578663 FBXO31Q5XUX0 539 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-209ENST00000578663 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
CDK5RAP3-209ENST00000578663 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
CDK5RAP3-209ENST00000578663 ATAD2Q6PL18 1390 aa11.92□□□□□ -0.5
CDK5RAP3-209ENST00000578663 THEMISQ8N1K5 641 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-209ENST00000578663 FGD6Q6ZV73 1430 aa11.92□□□□□ -0.5
CDK5RAP3-209ENST00000578663 ADGBQ8N7X0 1667 aa11.91□□□□□ -0.5
CDK5RAP3-209ENST00000578663 YY1P25490 414 aa11.91□□□□□ -0.5
CDK5RAP3-209ENST00000578663 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-209ENST00000578663 PZPP20742 1482 aa11.89□□□□□ -0.51
CDK5RAP3-209ENST00000578663 NLRP1Q9C000 1473 aa11.89□□□□□ -0.51
CDK5RAP3-209ENST00000578663 AFF2P51816 1311 aa11.89□□□□□ -0.51
CDK5RAP3-209ENST00000578663 GGT6Q6P531 493 aa11.89□□□□□ -0.51
CDK5RAP3-209ENST00000578663 TMEM94Q12767 1356 aa11.89□□□□□ -0.51
CDK5RAP3-209ENST00000578663 FYCO1Q9BQS8 1478 aa11.89□□□□□ -0.51
CDK5RAP3-209ENST00000578663 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
CDK5RAP3-209ENST00000578663 UBTFP17480 764 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-209ENST00000578663 TIAM1Q13009 1591 aa11.88□□□□□ -0.51
CDK5RAP3-209ENST00000578663 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-209ENST00000578663 UBR1Q8IWV7 1749 aa11.86□□□□□ -0.51
CDK5RAP3-209ENST00000578663 AHDC1Q5TGY3 1603 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-209ENST00000578663 MIA2Q96PC5 1412 aa11.86□□□□□ -0.51
CDK5RAP3-209ENST00000578663 NWD1Q149M9 1564 aa11.85□□□□□ -0.51
CDK5RAP3-209ENST00000578663 RTEL1-TNFRSF6BF6WH68 1400 aa11.85□□□□□ -0.51
CDK5RAP3-209ENST00000578663 HNRNPMP52272 730 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDK5RAP3-209ENST00000578663 ZNF777Q9ULD5 760 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-209ENST00000578663 QTRT2Q9H974 415 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-209ENST00000578663 KDM5AP29375 1690 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-209ENST00000578663 BCL9LQ86UU0 1499 aa11.83□□□□□ -0.52
CDK5RAP3-209ENST00000578663 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
CDK5RAP3-209ENST00000578663 SCAF11Q99590 1463 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-209ENST00000578663 DHX29Q7Z478 1369 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-209ENST00000578663 SLAIN2Q9P270 581 aa11.81□□□□□ -0.52
CDK5RAP3-209ENST00000578663 CFDP1Q9UEE9 299 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-209ENST00000578663 PRDM15P57071 1507 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-209ENST00000578663 CCNB3Q8WWL7 1395 aa11.8□□□□□ -0.52
CDK5RAP3-209ENST00000578663 CCDC125Q86Z20 511 aa11.8□□□□□ -0.52
CDK5RAP3-209ENST00000578663 CEP350Q5VT06 3117 aa11.8□□□□□ -0.52
CDK5RAP3-209ENST00000578663 MBD5Q9P267 1494 aa11.8□□□□□ -0.52
CDK5RAP3-209ENST00000578663 CFAP65Q6ZU64 1925 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-209ENST00000578663 ARHGAP23Q9P227 1491 aa11.78□□□□□ -0.52
CDK5RAP3-209ENST00000578663 LTKP29376 864 aa11.78□□□□□ -0.52
CDK5RAP3-209ENST00000578663 SLIT1O75093 1534 aa11.77□□□□□ -0.52
CDK5RAP3-209ENST00000578663 HRCP23327 699 aa11.77□□□□□ -0.53
CDK5RAP3-209ENST00000578663 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
CDK5RAP3-209ENST00000578663 ABCC3O15438 1527 aa11.76□□□□□ -0.53
CDK5RAP3-209ENST00000578663 MSH6P52701 1360 aa11.75□□□□□ -0.53
CDK5RAP3-209ENST00000578663 CCDC141Q6ZP82 1450 aa11.75□□□□□ -0.53
CDK5RAP3-209ENST00000578663 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-209ENST00000578663 DEFB132Q7Z7B7 95 aa11.74□□□□□ -0.53
CDK5RAP3-209ENST00000578663 PROSER2Q86WR7 435 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-209ENST00000578663 MTUS2Q5JR59 1369 aa11.74□□□□□ -0.53
CDK5RAP3-209ENST00000578663 NKTRP30414 1462 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-209ENST00000578663 MAST1Q9Y2H9 1570 aa11.74□□□□□ -0.53
CDK5RAP3-209ENST00000578663 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
CDK5RAP3-209ENST00000578663 KIF3BO15066 747 aa11.73□□□□□ -0.53
CDK5RAP3-209ENST00000578663 KCNA6P17658 529 aa11.73□□□□□ -0.53
CDK5RAP3-209ENST00000578663 EHBP1L1Q8N3D4 1523 aa11.73□□□□□ -0.53
CDK5RAP3-209ENST00000578663 NGLY1Q96IV0 654 aa11.73□□□□□ -0.53
CDK5RAP3-209ENST00000578663 WASHC2CQ9Y4E1 1318 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms