RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 FAM135AQ9P2D6 1515 aa35.65■■■■□ 3.3
VAPA-205ENST00000578314 WASHC2CQ9Y4E1 1318 aa35.64■■■■□ 3.3
VAPA-205ENST00000578314 DAPK1P53355 1430 aa35.64■■■■□ 3.3
VAPA-205ENST00000578314 CERKQ8TCT0 537 aa35.61■■■■□ 3.29
VAPA-205ENST00000578314 KDM5DQ9BY66 1539 aa35.6■■■■□ 3.29
VAPA-205ENST00000578314 DUOX2Q9NRD8 1548 aa35.59■■■■□ 3.29
VAPA-205ENST00000578314 KIF15Q9NS87 1388 aa35.58■■■■□ 3.29
VAPA-205ENST00000578314 PTPRTO14522 1441 aa35.57■■■■□ 3.29
VAPA-205ENST00000578314 NCOA1Q15788 1441 aa35.57■■■■□ 3.29
VAPA-205ENST00000578314 DNMT1P26358 1616 aaKnown RBP35.57■■■■□ 3.29
VAPA-205ENST00000578314 MYO3AQ8NEV4 1616 aa35.57■■■■□ 3.29
VAPA-205ENST00000578314 RRP7BPQ9NSQ0 103 aa35.57■■■■□ 3.28
VAPA-205ENST00000578314 ZNF142P52746 1687 aaPredicted RBP35.54■■■■□ 3.28
VAPA-205ENST00000578314 CAMSAP1Q5T5Y3 1602 aa35.54■■■■□ 3.28
VAPA-205ENST00000578314 RNF17Q9BXT8 1623 aaKnown RBP35.54■■■■□ 3.28
VAPA-205ENST00000578314 EIF2AK4Q9P2K8 1649 aaKnown RBP35.54■■■■□ 3.28
VAPA-205ENST00000578314 FBXO31Q5XUX0 539 aaPredicted RBP35.53■■■■□ 3.28
VAPA-205ENST00000578314 CROCC2H7BZ55 1655 aa35.52■■■■□ 3.28
VAPA-205ENST00000578314 PZPP20742 1482 aa35.52■■■■□ 3.28
VAPA-205ENST00000578314 FAM50AQ14320 339 aaKnown RBP35.5■■■■□ 3.27
VAPA-205ENST00000578314 CHIC2Q9UKJ5 165 aa35.5■■■■□ 3.27
VAPA-205ENST00000578314 CEP170BQ9Y4F5 1589 aaPredicted RBP35.5■■■■□ 3.27
VAPA-205ENST00000578314 ANKRD30AQ9BXX3 1397 aa35.5■■■■□ 3.27
VAPA-205ENST00000578314 ERBINQ96RT1 1412 aa35.49■■■■□ 3.27
VAPA-205ENST00000578314 TNRQ92752 1358 aa35.46■■■■□ 3.27
VAPA-205ENST00000578314 ABCC3O15438 1527 aa35.45■■■■□ 3.27
VAPA-205ENST00000578314 MROH1Q8NDA8 1641 aa35.43■■■■□ 3.26
VAPA-205ENST00000578314 PLA2R1Q13018 1463 aa35.41■■■■□ 3.26
VAPA-205ENST00000578314 A2ML1A8K2U0 1454 aa35.41■■■■□ 3.26
VAPA-205ENST00000578314 ADGRL2O95490 1459 aa35.4■■■■□ 3.26
VAPA-205ENST00000578314 NCKAP5LQ9HCH0 1330 aa35.37■■■■□ 3.25
VAPA-205ENST00000578314 ZC3H13Q5T200 1668 aaKnown RBP35.37■■■■□ 3.25
VAPA-205ENST00000578314 PKD2Q13563 968 aa35.35■■■■□ 3.25
VAPA-205ENST00000578314 PPARGC1BQ86YN6 1023 aaKnown RBP35.35■■■■□ 3.25
VAPA-205ENST00000578314 LTBP4Q8N2S1 1624 aa35.34■■■■□ 3.25
VAPA-205ENST00000578314 PRDM15P57071 1507 aaPredicted RBP35.33■■■■□ 3.25
VAPA-205ENST00000578314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.31■■■■□ 3.24
VAPA-205ENST00000578314 NLRP1Q9C000 1473 aa35.3■■■■□ 3.24
VAPA-205ENST00000578314 ARHGAP31Q2M1Z3 1444 aa35.29■■■■□ 3.24
VAPA-205ENST00000578314 KANK1Q14678 1352 aa35.27■■■■□ 3.24
VAPA-205ENST00000578314 SPATA31D1Q6ZQQ2 1576 aa35.27■■■■□ 3.24
VAPA-205ENST00000578314 DEPDC5O75140 1603 aa35.27■■■■□ 3.24
VAPA-205ENST00000578314 ERVK-7P63135 1459 aa35.26■■■■□ 3.23
VAPA-205ENST00000578314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.25■■■■□ 3.23
VAPA-205ENST00000578314 THEMISQ8N1K5 641 aaPredicted RBP35.25■■■■□ 3.23
VAPA-205ENST00000578314 ANKRD50Q9ULJ7 1429 aa35.23■■■■□ 3.23
VAPA-205ENST00000578314 CEP152O94986 1710 aa35.23■■■■□ 3.23
VAPA-205ENST00000578314 IQSEC2Q5JU85 1478 aa35.21■■■■□ 3.23
VAPA-205ENST00000578314 ROCK1Q13464 1354 aa35.2■■■■□ 3.23
VAPA-205ENST00000578314 VWDEQ8N2E2 1590 aa35.2■■■■□ 3.23
VAPA-205ENST00000578314 LMTK2Q8IWU2 1503 aa35.19■■■■□ 3.22
VAPA-205ENST00000578314 POLR1AO95602 1720 aaPredicted RBP35.18■■■■□ 3.22
VAPA-205ENST00000578314 UGGT1Q9NYU2 1555 aa35.17■■■■□ 3.22
VAPA-205ENST00000578314 ZNF335Q9H4Z2 1342 aaPredicted RBP35.17■■■■□ 3.22
VAPA-205ENST00000578314 ANKLE2Q86XL3 938 aa35.14■■■■□ 3.22
VAPA-205ENST00000578314 NEURL4Q96JN8 1562 aa35.13■■■■□ 3.21
VAPA-205ENST00000578314 ITGAEP38570 1179 aa35.1■■■■□ 3.21
VAPA-205ENST00000578314 RRBP1Q9P2E9 1410 aaKnown RBP35.06■■■■□ 3.2
VAPA-205ENST00000578314 CFAP65Q6ZU64 1925 aaKnown RBP35.03■■■■□ 3.2
VAPA-205ENST00000578314 MED14O60244 1454 aa35.02■■■■□ 3.2
VAPA-205ENST00000578314 EFCAB6Q5THR3 1501 aa35.01■■■■□ 3.2
VAPA-205ENST00000578314 NOS1P29475 1434 aa34.99■■■■□ 3.19
VAPA-205ENST00000578314 IDI1Q13907 227 aa34.98■■■■□ 3.19
VAPA-205ENST00000578314 NPHP4O75161 1426 aaPredicted RBP34.98■■■■□ 3.19
VAPA-205ENST00000578314 RPRD2Q5VT52 1461 aaKnown RBP34.96■■■■□ 3.19
VAPA-205ENST00000578314 UBR1Q8IWV7 1749 aa34.95■■■■□ 3.19
VAPA-205ENST00000578314 UNC13BO14795 1591 aa34.94■■■■□ 3.18
VAPA-205ENST00000578314 SLC52A1Q9NWF4 448 aa34.93■■■■□ 3.18
VAPA-205ENST00000578314 ARHGAP23Q9P227 1491 aa34.92■■■■□ 3.18
VAPA-205ENST00000578314 IQGAP1P46940 1657 aa34.92■■■■□ 3.18
VAPA-205ENST00000578314 CPS1P31327 1500 aa34.91■■■■□ 3.18
VAPA-205ENST00000578314 SLIT1O75093 1534 aa34.91■■■■□ 3.18
VAPA-205ENST00000578314 STAG3Q9UJ98 1225 aa34.9■■■■□ 3.18
VAPA-205ENST00000578314 SYNMO15061 1565 aa34.9■■■■□ 3.18
VAPA-205ENST00000578314 LTKP29376 864 aa34.89■■■■□ 3.18
VAPA-205ENST00000578314 TXNDC2Q86VQ3 553 aa34.89■■■■□ 3.18
VAPA-205ENST00000578314 NUP155O75694 1391 aa34.88■■■■□ 3.17
VAPA-205ENST00000578314 UBAP1LF5GYI3 381 aa34.88■■■■□ 3.17
VAPA-205ENST00000578314 TET3O43151 1660 aa34.88■■■■□ 3.17
VAPA-205ENST00000578314 PIK3C2BO00750 1634 aa34.88■■■■□ 3.17
VAPA-205ENST00000578314 TMEM2Q9UHN6 1383 aa34.87■■■■□ 3.17
VAPA-205ENST00000578314 SCAF11Q99590 1463 aaKnown RBP34.86■■■■□ 3.17
VAPA-205ENST00000578314 EID1Q9Y6B2 187 aa34.85■■■■□ 3.17
VAPA-205ENST00000578314 KDM5AP29375 1690 aaKnown RBP34.82■■■■□ 3.16
VAPA-205ENST00000578314 IQGAP3Q86VI3 1631 aa34.81■■■■□ 3.16
VAPA-205ENST00000578314 GCC2Q8IWJ2 1684 aa34.79■■■■□ 3.16
VAPA-205ENST00000578314 NAIPQ13075 1403 aa34.78■■■■□ 3.16
VAPA-205ENST00000578314 ADGRB3O60242 1522 aa34.75■■■■□ 3.15
VAPA-205ENST00000578314 E9PCH4 1651 aa34.72■■■■□ 3.15
VAPA-205ENST00000578314 STRCP1A6NGW2 1772 aa34.72■■■■□ 3.15
VAPA-205ENST00000578314 HFM1A2PYH4 1435 aa34.69■■■■□ 3.14
VAPA-205ENST00000578314 DISP3Q9P2K9 1392 aa34.68■■■■□ 3.14
VAPA-205ENST00000578314 TOM1O60784 492 aa34.67■■■■□ 3.14
VAPA-205ENST00000578314 LRRC7Q96NW7 1537 aa34.64■■■■□ 3.14
VAPA-205ENST00000578314 HDGFP51858 240 aaKnown RBP34.63■■■■□ 3.13
VAPA-205ENST00000578314 ZFYVE9O95405 1425 aa34.62■■■■□ 3.13
VAPA-205ENST00000578314 SCAF1Q9H7N4 1312 aaKnown RBP34.61■■■■□ 3.13
VAPA-205ENST00000578314 PIP4K2BP78356 416 aa34.61■■■■□ 3.13
VAPA-205ENST00000578314 TMEM131LA2VDJ0 1609 aa34.61■■■■□ 3.13
VAPA-205ENST00000578314 CHGAP10645 457 aaKnown RBP34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms