RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 ARHGEF5Q12774 1597 aa19.92■□□□□ 0.78
SMARCD2-207ENST00000578234 IQSEC2Q5JU85 1478 aa19.91■□□□□ 0.78
SMARCD2-207ENST00000578234 FAM135AQ9P2D6 1515 aa19.91■□□□□ 0.78
SMARCD2-207ENST00000578234 TCOF1Q13428 1488 aaKnown RBP19.9■□□□□ 0.78
SMARCD2-207ENST00000578234 MAP3K1Q13233 1512 aa19.89■□□□□ 0.77
SMARCD2-207ENST00000578234 KDM5DQ9BY66 1539 aa19.88■□□□□ 0.77
SMARCD2-207ENST00000578234 A2ML1A8K2U0 1454 aa19.88■□□□□ 0.77
SMARCD2-207ENST00000578234 WASHC2CQ9Y4E1 1318 aa19.88■□□□□ 0.77
SMARCD2-207ENST00000578234 FBXO31Q5XUX0 539 aaPredicted RBP19.87■□□□□ 0.77
SMARCD2-207ENST00000578234 PZPP20742 1482 aa19.86■□□□□ 0.77
SMARCD2-207ENST00000578234 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
SMARCD2-207ENST00000578234 ZNF335Q9H4Z2 1342 aaPredicted RBP19.85■□□□□ 0.77
SMARCD2-207ENST00000578234 DNMT1P26358 1616 aaKnown RBP19.85■□□□□ 0.77
SMARCD2-207ENST00000578234 TNRQ92752 1358 aa19.84■□□□□ 0.77
SMARCD2-207ENST00000578234 MIA2Q96PC5 1412 aa19.84■□□□□ 0.77
SMARCD2-207ENST00000578234 MAST1Q9Y2H9 1570 aa19.83■□□□□ 0.76
SMARCD2-207ENST00000578234 UBAP1LF5GYI3 381 aa19.82■□□□□ 0.76
SMARCD2-207ENST00000578234 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
SMARCD2-207ENST00000578234 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
SMARCD2-207ENST00000578234 THEMISQ8N1K5 641 aaPredicted RBP19.78■□□□□ 0.76
SMARCD2-207ENST00000578234 NLRP1Q9C000 1473 aa19.78■□□□□ 0.76
SMARCD2-207ENST00000578234 RNF17Q9BXT8 1623 aaKnown RBP19.77■□□□□ 0.76
SMARCD2-207ENST00000578234 ILDR2Q71H61 639 aa19.77■□□□□ 0.76
SMARCD2-207ENST00000578234 ANKLE2Q86XL3 938 aa19.75■□□□□ 0.75
SMARCD2-207ENST00000578234 EIF2AK4Q9P2K8 1649 aaKnown RBP19.75■□□□□ 0.75
SMARCD2-207ENST00000578234 POLR1AO95602 1720 aaPredicted RBP19.74■□□□□ 0.75
SMARCD2-207ENST00000578234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.74■□□□□ 0.75
SMARCD2-207ENST00000578234 ZC3H13Q5T200 1668 aaKnown RBP19.74■□□□□ 0.75
SMARCD2-207ENST00000578234 ABCC3O15438 1527 aa19.73■□□□□ 0.75
SMARCD2-207ENST00000578234 APLP2Q06481 763 aa19.73■□□□□ 0.75
SMARCD2-207ENST00000578234 NEURL4Q96JN8 1562 aa19.73■□□□□ 0.75
SMARCD2-207ENST00000578234 UGGT1Q9NYU2 1555 aa19.73■□□□□ 0.75
SMARCD2-207ENST00000578234 PIP4K2BP78356 416 aa19.72■□□□□ 0.75
SMARCD2-207ENST00000578234 DUOX2Q9NRD8 1548 aa19.71■□□□□ 0.75
SMARCD2-207ENST00000578234 CFAP65Q6ZU64 1925 aaKnown RBP19.7■□□□□ 0.74
SMARCD2-207ENST00000578234 MROH1Q8NDA8 1641 aa19.7■□□□□ 0.74
SMARCD2-207ENST00000578234 SPATA31D1Q6ZQQ2 1576 aa19.7■□□□□ 0.74
SMARCD2-207ENST00000578234 MED14O60244 1454 aa19.68■□□□□ 0.74
SMARCD2-207ENST00000578234 DEPDC5O75140 1603 aa19.68■□□□□ 0.74
SMARCD2-207ENST00000578234 ABCC5O15440 1437 aa19.68■□□□□ 0.74
SMARCD2-207ENST00000578234 SHANK2Q9UPX8 1470 aa19.67■□□□□ 0.74
SMARCD2-207ENST00000578234 CPS1P31327 1500 aa19.67■□□□□ 0.74
SMARCD2-207ENST00000578234 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
SMARCD2-207ENST00000578234 KIF15Q9NS87 1388 aa19.67■□□□□ 0.74
SMARCD2-207ENST00000578234 ERVK-7P63135 1459 aa19.67■□□□□ 0.74
SMARCD2-207ENST00000578234 NPHP4O75161 1426 aaPredicted RBP19.66■□□□□ 0.74
SMARCD2-207ENST00000578234 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
SMARCD2-207ENST00000578234 SOCS7O14512 581 aa19.65■□□□□ 0.74
SMARCD2-207ENST00000578234 RRP7BPQ9NSQ0 103 aa19.65■□□□□ 0.74
SMARCD2-207ENST00000578234 ERBINQ96RT1 1412 aa19.65■□□□□ 0.74
SMARCD2-207ENST00000578234 CROCC2H7BZ55 1655 aa19.64■□□□□ 0.73
SMARCD2-207ENST00000578234 CEP152O94986 1710 aa19.64■□□□□ 0.73
SMARCD2-207ENST00000578234 ARHGAP31Q2M1Z3 1444 aa19.63■□□□□ 0.73
SMARCD2-207ENST00000578234 FGD6Q6ZV73 1430 aa19.63■□□□□ 0.73
SMARCD2-207ENST00000578234 PRDM15P57071 1507 aaPredicted RBP19.62■□□□□ 0.73
SMARCD2-207ENST00000578234 DAPK1P53355 1430 aa19.62■□□□□ 0.73
SMARCD2-207ENST00000578234 TOM1O60784 492 aa19.62■□□□□ 0.73
SMARCD2-207ENST00000578234 VWDEQ8N2E2 1590 aa19.61■□□□□ 0.73
SMARCD2-207ENST00000578234 IQGAP1P46940 1657 aa19.6■□□□□ 0.73
SMARCD2-207ENST00000578234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.59■□□□□ 0.735e-8■■■□□ 15
SMARCD2-207ENST00000578234 UBR1Q8IWV7 1749 aa19.58■□□□□ 0.72
SMARCD2-207ENST00000578234 KANK1Q14678 1352 aa19.57■□□□□ 0.72
SMARCD2-207ENST00000578234 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
SMARCD2-207ENST00000578234 HSPA1LP34931 641 aa19.57■□□□□ 0.72
SMARCD2-207ENST00000578234 CHIC2Q9UKJ5 165 aa19.56■□□□□ 0.72
SMARCD2-207ENST00000578234 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
SMARCD2-207ENST00000578234 ARHGAP23Q9P227 1491 aa19.54■□□□□ 0.72
SMARCD2-207ENST00000578234 SLIT1O75093 1534 aa19.53■□□□□ 0.72
SMARCD2-207ENST00000578234 LTKP29376 864 aa19.53■□□□□ 0.72
SMARCD2-207ENST00000578234 TXNDC2Q86VQ3 553 aa19.53■□□□□ 0.72
SMARCD2-207ENST00000578234 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
SMARCD2-207ENST00000578234 LMTK2Q8IWU2 1503 aa19.51■□□□□ 0.71
SMARCD2-207ENST00000578234 EID1Q9Y6B2 187 aa19.51■□□□□ 0.71
SMARCD2-207ENST00000578234 LRRC7Q96NW7 1537 aa19.51■□□□□ 0.71
SMARCD2-207ENST00000578234 STRCP1A6NGW2 1772 aa19.5■□□□□ 0.71
SMARCD2-207ENST00000578234 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
SMARCD2-207ENST00000578234 IDI1Q13907 227 aa19.48■□□□□ 0.71
SMARCD2-207ENST00000578234 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
SMARCD2-207ENST00000578234 PIK3C2BO00750 1634 aa19.47■□□□□ 0.71
SMARCD2-207ENST00000578234 ALKQ9UM73 1620 aa19.47■□□□□ 0.71
SMARCD2-207ENST00000578234 TMEM2Q9UHN6 1383 aa19.47■□□□□ 0.71
SMARCD2-207ENST00000578234 FAM50AQ14320 339 aaKnown RBP19.47■□□□□ 0.71
SMARCD2-207ENST00000578234 SYNMO15061 1565 aa19.47■□□□□ 0.71
SMARCD2-207ENST00000578234 KDM5AP29375 1690 aaKnown RBP19.46■□□□□ 0.71
SMARCD2-207ENST00000578234 NOS1P29475 1434 aa19.44■□□□□ 0.7
SMARCD2-207ENST00000578234 EFCAB6Q5THR3 1501 aa19.44■□□□□ 0.7
SMARCD2-207ENST00000578234 BCANQ96GW7 911 aa19.43■□□□□ 0.7
SMARCD2-207ENST00000578234 ANKRD50Q9ULJ7 1429 aa19.42■□□□□ 0.7
SMARCD2-207ENST00000578234 SLC52A1Q9NWF4 448 aa19.42■□□□□ 0.7
SMARCD2-207ENST00000578234 RPRD2Q5VT52 1461 aaKnown RBP19.4■□□□□ 0.7
SMARCD2-207ENST00000578234 MED1Q15648 1581 aaPredicted RBP19.38■□□□□ 0.69
SMARCD2-207ENST00000578234 TET3O43151 1660 aa19.36■□□□□ 0.69
SMARCD2-207ENST00000578234 ADGRB3O60242 1522 aa19.36■□□□□ 0.69
SMARCD2-207ENST00000578234 XIRP1Q702N8 1843 aaKnown RBP19.35■□□□□ 0.69
SMARCD2-207ENST00000578234 KCNA6P17658 529 aa19.35■□□□□ 0.69
SMARCD2-207ENST00000578234 SLC26A8Q96RN1 970 aa19.34■□□□□ 0.69
SMARCD2-207ENST00000578234 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
SMARCD2-207ENST00000578234 TMEM94Q12767 1356 aa19.32■□□□□ 0.68
SMARCD2-207ENST00000578234 HDGFP51858 240 aaKnown RBP19.31■□□□□ 0.68
SMARCD2-207ENST00000578234 RBM33Q96EV2 1170 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms