RNA–Protein interactions for RNA: ENST00000578158.5

TNFAIP1-204, Transcript of TNF alpha induced protein 1, humanhuman

TSL 4

Gene TNFAIP1, Length 536 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-204ENST00000578158 SHANK2Q9UPX8 1470 aa19.26■□□□□ 0.67
TNFAIP1-204ENST00000578158 MAST1Q9Y2H9 1570 aa19.25■□□□□ 0.67
TNFAIP1-204ENST00000578158 ATP7AQ04656 1500 aa19.25■□□□□ 0.67
TNFAIP1-204ENST00000578158 PTPRKQ15262 1439 aa19.25■□□□□ 0.67
TNFAIP1-204ENST00000578158 KIDINS220Q9ULH0 1771 aa19.24■□□□□ 0.67
TNFAIP1-204ENST00000578158 ANKRD30AQ9BXX3 1397 aa19.23■□□□□ 0.67
TNFAIP1-204ENST00000578158 TOM1O60784 492 aa19.23■□□□□ 0.67
TNFAIP1-204ENST00000578158 RRP7BPQ9NSQ0 103 aa19.23■□□□□ 0.67
TNFAIP1-204ENST00000578158 INO80Q9ULG1 1556 aaPredicted RBP19.22■□□□□ 0.67
TNFAIP1-204ENST00000578158 ROCK1Q13464 1354 aa19.21■□□□□ 0.67
TNFAIP1-204ENST00000578158 DHX29Q7Z478 1369 aaKnown RBP19.21■□□□□ 0.67
TNFAIP1-204ENST00000578158 ESF1Q9H501 851 aaKnown RBP19.21■□□□□ 0.67
TNFAIP1-204ENST00000578158 ADGRL2O95490 1459 aa19.2■□□□□ 0.66
TNFAIP1-204ENST00000578158 SETD1BQ9UPS6 1966 aaKnown RBP19.19■□□□□ 0.66
TNFAIP1-204ENST00000578158 A2MP01023 1474 aa19.18■□□□□ 0.66
TNFAIP1-204ENST00000578158 DIP2CQ9Y2E4 1556 aa19.18■□□□□ 0.66
TNFAIP1-204ENST00000578158 CROCC2H7BZ55 1655 aa19.17■□□□□ 0.66
TNFAIP1-204ENST00000578158 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
TNFAIP1-204ENST00000578158 PKD2Q13563 968 aa19.17■□□□□ 0.66
TNFAIP1-204ENST00000578158 KIF15Q9NS87 1388 aa19.17■□□□□ 0.66
TNFAIP1-204ENST00000578158 ABCA6Q8N139 1617 aa19.16■□□□□ 0.66
TNFAIP1-204ENST00000578158 RGS17Q9UGC6 210 aaPredicted RBP19.15■□□□□ 0.66
TNFAIP1-204ENST00000578158 PLXNC1O60486 1568 aa19.15■□□□□ 0.66
TNFAIP1-204ENST00000578158 REREQ9P2R6 1566 aa19.15■□□□□ 0.66
TNFAIP1-204ENST00000578158 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.66
TNFAIP1-204ENST00000578158 DUOX2Q9NRD8 1548 aa19.13■□□□□ 0.65
TNFAIP1-204ENST00000578158 ADGBQ8N7X0 1667 aa19.12■□□□□ 0.65
TNFAIP1-204ENST00000578158 AGLP35573 1532 aa19.12■□□□□ 0.65
TNFAIP1-204ENST00000578158 KIF3BO15066 747 aa19.11■□□□□ 0.65
TNFAIP1-204ENST00000578158 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
TNFAIP1-204ENST00000578158 ERBINQ96RT1 1412 aa19.08■□□□□ 0.65
TNFAIP1-204ENST00000578158 ANKRD50Q9ULJ7 1429 aa19.08■□□□□ 0.64
TNFAIP1-204ENST00000578158 GGT6Q6P531 493 aa19.07■□□□□ 0.64
TNFAIP1-204ENST00000578158 HFM1A2PYH4 1435 aa19.07■□□□□ 0.64
TNFAIP1-204ENST00000578158 NAIPQ13075 1403 aa19.07■□□□□ 0.64
TNFAIP1-204ENST00000578158 C3P01024 1663 aa19.06■□□□□ 0.64
TNFAIP1-204ENST00000578158 NPATQ14207 1427 aa19.05■□□□□ 0.64
TNFAIP1-204ENST00000578158 CNTLNQ9NXG0 1405 aa19.04■□□□□ 0.64
TNFAIP1-204ENST00000578158 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
TNFAIP1-204ENST00000578158 SENP3Q9H4L4 574 aaPredicted RBP19.02■□□□□ 0.64
TNFAIP1-204ENST00000578158 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
TNFAIP1-204ENST00000578158 SETD5Q9C0A6 1442 aa19.01■□□□□ 0.63
TNFAIP1-204ENST00000578158 EIF2AK4Q9P2K8 1649 aaKnown RBP19■□□□□ 0.63
TNFAIP1-204ENST00000578158 HRCP23327 699 aa19■□□□□ 0.63
TNFAIP1-204ENST00000578158 ZMYM3Q14202 1370 aa19■□□□□ 0.63
TNFAIP1-204ENST00000578158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.99■□□□□ 0.63
TNFAIP1-204ENST00000578158 POTEAQ6S8J7 498 aa18.98■□□□□ 0.63
TNFAIP1-204ENST00000578158 WASHC2CQ9Y4E1 1318 aa18.98■□□□□ 0.63
TNFAIP1-204ENST00000578158 KANK1Q14678 1352 aa18.96■□□□□ 0.63
TNFAIP1-204ENST00000578158 CPS1P31327 1500 aa18.95■□□□□ 0.62
TNFAIP1-204ENST00000578158 RNF17Q9BXT8 1623 aaKnown RBP18.93■□□□□ 0.62
TNFAIP1-204ENST00000578158 GCC2Q8IWJ2 1684 aa18.93■□□□□ 0.62
TNFAIP1-204ENST00000578158 NUP155O75694 1391 aa18.93■□□□□ 0.62
TNFAIP1-204ENST00000578158 TRIM52Q96A61 297 aa18.92■□□□□ 0.62
TNFAIP1-204ENST00000578158 RAB3GAP2Q9H2M9 1393 aa18.92■□□□□ 0.62
TNFAIP1-204ENST00000578158 PCGF6Q9BYE7 350 aa18.91■□□□□ 0.62
TNFAIP1-204ENST00000578158 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
TNFAIP1-204ENST00000578158 FAM135AQ9P2D6 1515 aa18.9■□□□□ 0.62
TNFAIP1-204ENST00000578158 DEPDC5O75140 1603 aa18.9■□□□□ 0.62
TNFAIP1-204ENST00000578158 PRDM15P57071 1507 aaPredicted RBP18.9■□□□□ 0.62
TNFAIP1-204ENST00000578158 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.62
TNFAIP1-204ENST00000578158 ALKQ9UM73 1620 aa18.89■□□□□ 0.61
TNFAIP1-204ENST00000578158 VWDEQ8N2E2 1590 aa18.87■□□□□ 0.61
TNFAIP1-204ENST00000578158 UNC13BO14795 1591 aa18.86■□□□□ 0.61
TNFAIP1-204ENST00000578158 ABCC3O15438 1527 aa18.85■□□□□ 0.61
TNFAIP1-204ENST00000578158 LMTK2Q8IWU2 1503 aa18.85■□□□□ 0.61
TNFAIP1-204ENST00000578158 CEP170BQ9Y4F5 1589 aaPredicted RBP18.84■□□□□ 0.61
TNFAIP1-204ENST00000578158 ARHGAP31Q2M1Z3 1444 aa18.83■□□□□ 0.61
TNFAIP1-204ENST00000578158 MPHOSPH9Q99550 1183 aa18.83■□□□□ 0.6
TNFAIP1-204ENST00000578158 SLC4A1APQ9BWU0 796 aaKnown RBP18.83■□□□□ 0.6
TNFAIP1-204ENST00000578158 UPF1Q92900 1129 aaKnown RBP eCLIP18.81■□□□□ 0.6
TNFAIP1-204ENST00000578158 CLTCQ00610 1675 aaKnown RBP18.81■□□□□ 0.6
TNFAIP1-204ENST00000578158 ZC3H13Q5T200 1668 aaKnown RBP18.81■□□□□ 0.6
TNFAIP1-204ENST00000578158 FBXO31Q5XUX0 539 aaPredicted RBP18.8■□□□□ 0.6
TNFAIP1-204ENST00000578158 IQGAP3Q86VI3 1631 aa18.8■□□□□ 0.6
TNFAIP1-204ENST00000578158 MROH2AA6NES4 1674 aa18.79■□□□□ 0.6
TNFAIP1-204ENST00000578158 ANKLE2Q86XL3 938 aa18.78■□□□□ 0.6
TNFAIP1-204ENST00000578158 MYO3AQ8NEV4 1616 aa18.78■□□□□ 0.6
TNFAIP1-204ENST00000578158 PZPP20742 1482 aa18.77■□□□□ 0.6
TNFAIP1-204ENST00000578158 ZNF142P52746 1687 aaPredicted RBP18.77■□□□□ 0.6
TNFAIP1-204ENST00000578158 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.59
TNFAIP1-204ENST00000578158 RPRD2Q5VT52 1461 aaKnown RBP18.76■□□□□ 0.59
TNFAIP1-204ENST00000578158 CEP152O94986 1710 aa18.75■□□□□ 0.59
TNFAIP1-204ENST00000578158 EFCAB6Q5THR3 1501 aa18.74■□□□□ 0.59
TNFAIP1-204ENST00000578158 TET3O43151 1660 aa18.74■□□□□ 0.59
TNFAIP1-204ENST00000578158 SRCAPQ6ZRS2 3230 aa18.71■□□□□ 0.59
TNFAIP1-204ENST00000578158 NEURL4Q96JN8 1562 aa18.71■□□□□ 0.59
TNFAIP1-204ENST00000578158 LRRC7Q96NW7 1537 aa18.7■□□□□ 0.58
TNFAIP1-204ENST00000578158 NOS1P29475 1434 aa18.7■□□□□ 0.58
TNFAIP1-204ENST00000578158 FOXD1Q16676 465 aa18.7■□□□□ 0.58
TNFAIP1-204ENST00000578158 SLC52A1Q9NWF4 448 aa18.7■□□□□ 0.58
TNFAIP1-204ENST00000578158 ERVK-7P63135 1459 aa18.7■□□□□ 0.58
TNFAIP1-204ENST00000578158 TNRQ92752 1358 aa18.69■□□□□ 0.58
TNFAIP1-204ENST00000578158 THEMISQ8N1K5 641 aaPredicted RBP18.68■□□□□ 0.58
TNFAIP1-204ENST00000578158 NPHP4O75161 1426 aaPredicted RBP18.67■□□□□ 0.58
TNFAIP1-204ENST00000578158 E9PCH4 1651 aa18.67■□□□□ 0.58
TNFAIP1-204ENST00000578158 IDI1Q13907 227 aa18.67■□□□□ 0.58
TNFAIP1-204ENST00000578158 MED14O60244 1454 aa18.64■□□□□ 0.57
TNFAIP1-204ENST00000578158 FAM135BQ49AJ0 1406 aa18.63■□□□□ 0.57
TNFAIP1-204ENST00000578158 NLRP1Q9C000 1473 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms