RNA–Protein interactions for RNA: ENST00000578015.1

PSMD12-204, Transcript of proteasome 26S subunit, non-ATPase 12, humanhuman

TSL 2

Gene PSMD12, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD12-204ENST00000578015 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
PSMD12-204ENST00000578015 KIF3BO15066 747 aa26.7■■□□□ 1.86
PSMD12-204ENST00000578015 TNRQ92752 1358 aa26.7■■□□□ 1.86
PSMD12-204ENST00000578015 TOM1O60784 492 aa26.68■■□□□ 1.86
PSMD12-204ENST00000578015 CPS1P31327 1500 aa26.67■■□□□ 1.86
PSMD12-204ENST00000578015 WASHC2CQ9Y4E1 1318 aa26.66■■□□□ 1.86
PSMD12-204ENST00000578015 PZPP20742 1482 aa26.66■■□□□ 1.86
PSMD12-204ENST00000578015 CCDC141Q6ZP82 1450 aa26.66■■□□□ 1.86
PSMD12-204ENST00000578015 KDM5DQ9BY66 1539 aa26.65■■□□□ 1.86
PSMD12-204ENST00000578015 ANKLE2Q86XL3 938 aa26.65■■□□□ 1.86
PSMD12-204ENST00000578015 THEMISQ8N1K5 641 aaPredicted RBP26.65■■□□□ 1.86
PSMD12-204ENST00000578015 FBXO31Q5XUX0 539 aaPredicted RBP26.63■■□□□ 1.85
PSMD12-204ENST00000578015 POLR1AO95602 1720 aaPredicted RBP26.62■■□□□ 1.85
PSMD12-204ENST00000578015 SCAF1Q9H7N4 1312 aaKnown RBP26.62■■□□□ 1.85
PSMD12-204ENST00000578015 SHANK2Q9UPX8 1470 aa26.62■■□□□ 1.85
PSMD12-204ENST00000578015 NLRP1Q9C000 1473 aa26.6■■□□□ 1.85
PSMD12-204ENST00000578015 TSPY4P0CV99 314 aa26.59■■□□□ 1.85
PSMD12-204ENST00000578015 TSPY10P0CW01 314 aa26.59■■□□□ 1.85
PSMD12-204ENST00000578015 MIA2Q96PC5 1412 aa26.58■■□□□ 1.85
PSMD12-204ENST00000578015 PIP4K2BP78356 416 aa26.58■■□□□ 1.85
PSMD12-204ENST00000578015 NEURL4Q96JN8 1562 aa26.58■■□□□ 1.85
PSMD12-204ENST00000578015 CAMSAP2Q08AD1 1489 aa26.57■■□□□ 1.84
PSMD12-204ENST00000578015 HSPA1LP34931 641 aa26.57■■□□□ 1.84
PSMD12-204ENST00000578015 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.84
PSMD12-204ENST00000578015 NCOA2Q15596 1464 aa26.55■■□□□ 1.84
PSMD12-204ENST00000578015 UGGT1Q9NYU2 1555 aa26.54■■□□□ 1.84
PSMD12-204ENST00000578015 MED14O60244 1454 aa26.53■■□□□ 1.84
PSMD12-204ENST00000578015 DEPDC5O75140 1603 aa26.51■■□□□ 1.83
PSMD12-204ENST00000578015 ARHGEF5Q12774 1597 aa26.51■■□□□ 1.83
PSMD12-204ENST00000578015 NPHP4O75161 1426 aaPredicted RBP26.51■■□□□ 1.83
PSMD12-204ENST00000578015 VWDEQ8N2E2 1590 aa26.48■■□□□ 1.83
PSMD12-204ENST00000578015 MED1Q15648 1581 aaPredicted RBP26.47■■□□□ 1.83
PSMD12-204ENST00000578015 ZC3H13Q5T200 1668 aaKnown RBP26.42■■□□□ 1.82
PSMD12-204ENST00000578015 IQGAP1P46940 1657 aa26.41■■□□□ 1.82
PSMD12-204ENST00000578015 RNF17Q9BXT8 1623 aaKnown RBP26.41■■□□□ 1.82
PSMD12-204ENST00000578015 PHF23Q9BUL5 403 aaPredicted RBP26.41■■□□□ 1.82
PSMD12-204ENST00000578015 ABCC3O15438 1527 aa26.39■■□□□ 1.82
PSMD12-204ENST00000578015 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
PSMD12-204ENST00000578015 EIF2AK4Q9P2K8 1649 aaKnown RBP26.37■■□□□ 1.81
PSMD12-204ENST00000578015 ERVK-7P63135 1459 aa26.36■■□□□ 1.81
PSMD12-204ENST00000578015 LRRC9Q6ZRR7 1453 aa26.34■■□□□ 1.81
PSMD12-204ENST00000578015 LRRC7Q96NW7 1537 aa26.34■■□□□ 1.81
PSMD12-204ENST00000578015 SYNMO15061 1565 aa26.33■■□□□ 1.81
PSMD12-204ENST00000578015 ALKQ9UM73 1620 aa26.31■■□□□ 1.8
PSMD12-204ENST00000578015 VPS8Q8N3P4 1428 aa26.29■■□□□ 1.8
PSMD12-204ENST00000578015 SCAF11Q99590 1463 aaKnown RBP26.29■■□□□ 1.8
PSMD12-204ENST00000578015 MYOM3Q5VTT5 1437 aa26.28■■□□□ 1.8
PSMD12-204ENST00000578015 DUOX2Q9NRD8 1548 aa26.28■■□□□ 1.8
PSMD12-204ENST00000578015 TXNDC2Q86VQ3 553 aa26.26■■□□□ 1.79
PSMD12-204ENST00000578015 EID1Q9Y6B2 187 aa26.26■■□□□ 1.79
PSMD12-204ENST00000578015 MAP3K1Q13233 1512 aa26.25■■□□□ 1.79
PSMD12-204ENST00000578015 STRCP1A6NGW2 1772 aa26.25■■□□□ 1.79
PSMD12-204ENST00000578015 UBR1Q8IWV7 1749 aa26.25■■□□□ 1.79
PSMD12-204ENST00000578015 MROH1Q8NDA8 1641 aa26.25■■□□□ 1.79
PSMD12-204ENST00000578015 ARHGAP31Q2M1Z3 1444 aa26.24■■□□□ 1.79
PSMD12-204ENST00000578015 SLIT1O75093 1534 aa26.23■■□□□ 1.79
PSMD12-204ENST00000578015 ARHGAP23Q9P227 1491 aa26.22■■□□□ 1.79
PSMD12-204ENST00000578015 CEP152O94986 1710 aa26.21■■□□□ 1.79
PSMD12-204ENST00000578015 CFAP65Q6ZU64 1925 aaKnown RBP26.2■■□□□ 1.79
PSMD12-204ENST00000578015 LTKP29376 864 aa26.2■■□□□ 1.78
PSMD12-204ENST00000578015 SENP3Q9H4L4 574 aaPredicted RBP26.19■■□□□ 1.78
PSMD12-204ENST00000578015 ERBINQ96RT1 1412 aa26.19■■□□□ 1.78
PSMD12-204ENST00000578015 KIF15Q9NS87 1388 aa26.19■■□□□ 1.78
PSMD12-204ENST00000578015 KANK4Q5T7N3 995 aaPredicted RBP26.17■■□□□ 1.78
PSMD12-204ENST00000578015 STAG3Q9UJ98 1225 aa26.17■■□□□ 1.78
PSMD12-204ENST00000578015 PRDM15P57071 1507 aaPredicted RBP26.17■■□□□ 1.78
PSMD12-204ENST00000578015 KANK1Q14678 1352 aa26.17■■□□□ 1.78
PSMD12-204ENST00000578015 TMEM2Q9UHN6 1383 aa26.14■■□□□ 1.78
PSMD12-204ENST00000578015 RRP7BPQ9NSQ0 103 aa26.13■■□□□ 1.77
PSMD12-204ENST00000578015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.12■■□□□ 1.775e-8■■□□□ 13.2
PSMD12-204ENST00000578015 FAM135BQ49AJ0 1406 aa26.11■■□□□ 1.77
PSMD12-204ENST00000578015 ABCC5O15440 1437 aa26.09■■□□□ 1.77
PSMD12-204ENST00000578015 KDM5AP29375 1690 aaKnown RBP26.08■■□□□ 1.77
PSMD12-204ENST00000578015 KCNA6P17658 529 aa26.07■■□□□ 1.76
PSMD12-204ENST00000578015 APLP2Q06481 763 aa26.07■■□□□ 1.76
PSMD12-204ENST00000578015 PIK3C2BO00750 1634 aa26.06■■□□□ 1.76
PSMD12-204ENST00000578015 EFCAB6Q5THR3 1501 aa26.05■■□□□ 1.76
PSMD12-204ENST00000578015 CROCC2H7BZ55 1655 aa26.05■■□□□ 1.76
PSMD12-204ENST00000578015 IDI1Q13907 227 aa26.04■■□□□ 1.76
PSMD12-204ENST00000578015 XIRP1Q702N8 1843 aaKnown RBP26.04■■□□□ 1.76
PSMD12-204ENST00000578015 TMEM94Q12767 1356 aa26.04■■□□□ 1.76
PSMD12-204ENST00000578015 ANKRD30AQ9BXX3 1397 aa26.04■■□□□ 1.76
PSMD12-204ENST00000578015 RGS17Q9UGC6 210 aaPredicted RBP26.03■■□□□ 1.76
PSMD12-204ENST00000578015 DAPK1P53355 1430 aa26.03■■□□□ 1.76
PSMD12-204ENST00000578015 LMTK2Q8IWU2 1503 aa26.03■■□□□ 1.76
PSMD12-204ENST00000578015 PTPN23Q9H3S7 1636 aa26.03■■□□□ 1.76
PSMD12-204ENST00000578015 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
PSMD12-204ENST00000578015 PROSER2Q86WR7 435 aaPredicted RBP26.01■■□□□ 1.75
PSMD12-204ENST00000578015 SLC52A1Q9NWF4 448 aa25.99■■□□□ 1.75
PSMD12-204ENST00000578015 SLC26A8Q96RN1 970 aa25.97■■□□□ 1.75
PSMD12-204ENST00000578015 TET3O43151 1660 aa25.96■■□□□ 1.75
PSMD12-204ENST00000578015 FGD6Q6ZV73 1430 aa25.96■■□□□ 1.75
PSMD12-204ENST00000578015 NKTRP30414 1462 aaKnown RBP25.95■■□□□ 1.74
PSMD12-204ENST00000578015 NOS1P29475 1434 aa25.95■■□□□ 1.74
PSMD12-204ENST00000578015 BCANQ96GW7 911 aa25.94■■□□□ 1.74
PSMD12-204ENST00000578015 MSH6P52701 1360 aa25.94■■□□□ 1.74
PSMD12-204ENST00000578015 HDGFP51858 240 aaKnown RBP25.93■■□□□ 1.74
PSMD12-204ENST00000578015 CHIC2Q9UKJ5 165 aa25.93■■□□□ 1.74
PSMD12-204ENST00000578015 ADGRB3O60242 1522 aa25.92■■□□□ 1.74
PSMD12-204ENST00000578015 ROBO1Q9Y6N7 1651 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms