RNA–Protein interactions for RNA: ENST00000578006.5

RHBDL3-205, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,341 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-205ENST00000578006 NPATQ14207 1427 aa31.48■■■□□ 2.63
RHBDL3-205ENST00000578006 KDM5DQ9BY66 1539 aa31.47■■■□□ 2.63
RHBDL3-205ENST00000578006 KIF15Q9NS87 1388 aa31.44■■■□□ 2.62
RHBDL3-205ENST00000578006 ZC3H13Q5T200 1668 aaKnown RBP31.42■■■□□ 2.62
RHBDL3-205ENST00000578006 ERBINQ96RT1 1412 aa31.41■■■□□ 2.62
RHBDL3-205ENST00000578006 FAM50AQ14320 339 aaKnown RBP31.4■■■□□ 2.62
RHBDL3-205ENST00000578006 ANKRD30AQ9BXX3 1397 aa31.39■■■□□ 2.62
RHBDL3-205ENST00000578006 HSPA2P54652 639 aa31.39■■■□□ 2.62
RHBDL3-205ENST00000578006 ADGRL2O95490 1459 aa31.38■■■□□ 2.61
RHBDL3-205ENST00000578006 PTPRKQ15262 1439 aa31.37■■■□□ 2.61
RHBDL3-205ENST00000578006 MROH1Q8NDA8 1641 aa31.36■■■□□ 2.61
RHBDL3-205ENST00000578006 WASHC2CQ9Y4E1 1318 aa31.35■■■□□ 2.61
RHBDL3-205ENST00000578006 RRP7BPQ9NSQ0 103 aa31.34■■■□□ 2.61
RHBDL3-205ENST00000578006 MYO3AQ8NEV4 1616 aa31.33■■■□□ 2.61
RHBDL3-205ENST00000578006 NCOA1Q15788 1441 aa31.33■■■□□ 2.61
RHBDL3-205ENST00000578006 PZPP20742 1482 aa31.33■■■□□ 2.61
RHBDL3-205ENST00000578006 ZNF142P52746 1687 aaPredicted RBP31.32■■■□□ 2.6
RHBDL3-205ENST00000578006 CHIC2Q9UKJ5 165 aa31.31■■■□□ 2.6
RHBDL3-205ENST00000578006 ABCC3O15438 1527 aa31.31■■■□□ 2.6
RHBDL3-205ENST00000578006 PRDM15P57071 1507 aaPredicted RBP31.31■■■□□ 2.6
RHBDL3-205ENST00000578006 DEPDC5O75140 1603 aa31.31■■■□□ 2.6
RHBDL3-205ENST00000578006 CEP152O94986 1710 aa31.29■■■□□ 2.6
RHBDL3-205ENST00000578006 PPARGC1BQ86YN6 1023 aaKnown RBP31.28■■■□□ 2.6
RHBDL3-205ENST00000578006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.27■■■□□ 2.6
RHBDL3-205ENST00000578006 CEP170BQ9Y4F5 1589 aaPredicted RBP31.25■■■□□ 2.59
RHBDL3-205ENST00000578006 CAMSAP1Q5T5Y3 1602 aa31.24■■■□□ 2.59
RHBDL3-205ENST00000578006 STRCQ7RTU9 1775 aa31.24■■■□□ 2.59
RHBDL3-205ENST00000578006 TNRQ92752 1358 aa31.19■■■□□ 2.58
RHBDL3-205ENST00000578006 ROCK1Q13464 1354 aa31.18■■■□□ 2.58
RHBDL3-205ENST00000578006 KANK1Q14678 1352 aa31.18■■■□□ 2.58
RHBDL3-205ENST00000578006 RRBP1Q9P2E9 1410 aaKnown RBP31.17■■■□□ 2.58
RHBDL3-205ENST00000578006 A2ML1A8K2U0 1454 aa31.17■■■□□ 2.58
RHBDL3-205ENST00000578006 SPATA31D1Q6ZQQ2 1576 aa31.16■■■□□ 2.58
RHBDL3-205ENST00000578006 ANKRD50Q9ULJ7 1429 aa31.16■■■□□ 2.58
RHBDL3-205ENST00000578006 FBXO31Q5XUX0 539 aaPredicted RBP31.16■■■□□ 2.58
RHBDL3-205ENST00000578006 VWDEQ8N2E2 1590 aa31.14■■■□□ 2.58
RHBDL3-205ENST00000578006 DMRT2Q9Y5R5 561 aa31.13■■■□□ 2.57
RHBDL3-205ENST00000578006 ARHGAP31Q2M1Z3 1444 aa31.12■■■□□ 2.57
RHBDL3-205ENST00000578006 LMTK2Q8IWU2 1503 aa31.12■■■□□ 2.57
RHBDL3-205ENST00000578006 PLA2R1Q13018 1463 aa31.12■■■□□ 2.57
RHBDL3-205ENST00000578006 NLRP1Q9C000 1473 aa31.12■■■□□ 2.57
RHBDL3-205ENST00000578006 ERVK-7P63135 1459 aa31.11■■■□□ 2.57
RHBDL3-205ENST00000578006 CFAP65Q6ZU64 1925 aaKnown RBP31.1■■■□□ 2.57
RHBDL3-205ENST00000578006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.1■■■□□ 2.57
RHBDL3-205ENST00000578006 PTPRTO14522 1441 aa31.06■■■□□ 2.56
RHBDL3-205ENST00000578006 UNC13BO14795 1591 aa31.05■■■□□ 2.56
RHBDL3-205ENST00000578006 ITGAEP38570 1179 aa31.04■■■□□ 2.56
RHBDL3-205ENST00000578006 EFCAB6Q5THR3 1501 aa31.02■■■□□ 2.56
RHBDL3-205ENST00000578006 UGGT1Q9NYU2 1555 aa31.01■■■□□ 2.55
RHBDL3-205ENST00000578006 POLR1AO95602 1720 aaPredicted RBP31■■■□□ 2.55
RHBDL3-205ENST00000578006 PKD2Q13563 968 aa30.99■■■□□ 2.55
RHBDL3-205ENST00000578006 TET3O43151 1660 aa30.98■■■□□ 2.55
RHBDL3-205ENST00000578006 GCC2Q8IWJ2 1684 aa30.96■■■□□ 2.55
RHBDL3-205ENST00000578006 THEMISQ8N1K5 641 aaPredicted RBP30.94■■■□□ 2.54
RHBDL3-205ENST00000578006 RPRD2Q5VT52 1461 aaKnown RBP30.93■■■□□ 2.54
RHBDL3-205ENST00000578006 NCKAP5LQ9HCH0 1330 aa30.93■■■□□ 2.54
RHBDL3-205ENST00000578006 IQGAP3Q86VI3 1631 aa30.93■■■□□ 2.54
RHBDL3-205ENST00000578006 UBR1Q8IWV7 1749 aa30.92■■■□□ 2.54
RHBDL3-205ENST00000578006 NOS1P29475 1434 aa30.87■■■□□ 2.53
RHBDL3-205ENST00000578006 KDM5AP29375 1690 aaKnown RBP30.87■■■□□ 2.53
RHBDL3-205ENST00000578006 SYNMO15061 1565 aa30.87■■■□□ 2.53
RHBDL3-205ENST00000578006 NEURL4Q96JN8 1562 aa30.87■■■□□ 2.53
RHBDL3-205ENST00000578006 PIK3C2BO00750 1634 aa30.86■■■□□ 2.53
RHBDL3-205ENST00000578006 ANKLE2Q86XL3 938 aa30.83■■■□□ 2.53
RHBDL3-205ENST00000578006 NAIPQ13075 1403 aa30.82■■■□□ 2.52
RHBDL3-205ENST00000578006 E9PCH4 1651 aa30.82■■■□□ 2.52
RHBDL3-205ENST00000578006 NUP155O75694 1391 aa30.81■■■□□ 2.52
RHBDL3-205ENST00000578006 MED14O60244 1454 aa30.79■■■□□ 2.52
RHBDL3-205ENST00000578006 ILDR1Q86SU0 546 aaPredicted RBP30.79■■■□□ 2.52
RHBDL3-205ENST00000578006 CERKQ8TCT0 537 aa30.79■■■□□ 2.52
RHBDL3-205ENST00000578006 HFM1A2PYH4 1435 aa30.79■■■□□ 2.52
RHBDL3-205ENST00000578006 LTBP4Q8N2S1 1624 aa30.78■■■□□ 2.52
RHBDL3-205ENST00000578006 SLIT1O75093 1534 aa30.78■■■□□ 2.52
RHBDL3-205ENST00000578006 FBXO41Q8TF61 875 aa30.76■■■□□ 2.52
RHBDL3-205ENST00000578006 ARHGAP23Q9P227 1491 aa30.76■■■□□ 2.51
RHBDL3-205ENST00000578006 IQGAP1P46940 1657 aa30.76■■■□□ 2.51
RHBDL3-205ENST00000578006 SLC52A1Q9NWF4 448 aa30.75■■■□□ 2.51
RHBDL3-205ENST00000578006 ADGRB3O60242 1522 aa30.75■■■□□ 2.51
RHBDL3-205ENST00000578006 NPHP4O75161 1426 aaPredicted RBP30.74■■■□□ 2.51
RHBDL3-205ENST00000578006 IDI1Q13907 227 aa30.73■■■□□ 2.51
RHBDL3-205ENST00000578006 STAG3Q9UJ98 1225 aa30.73■■■□□ 2.51
RHBDL3-205ENST00000578006 SCAF11Q99590 1463 aaKnown RBP30.72■■■□□ 2.51
RHBDL3-205ENST00000578006 IQSEC2Q5JU85 1478 aa30.68■■■□□ 2.5
RHBDL3-205ENST00000578006 ZNF335Q9H4Z2 1342 aaPredicted RBP30.68■■■□□ 2.5
RHBDL3-205ENST00000578006 TMEM2Q9UHN6 1383 aa30.68■■■□□ 2.5
RHBDL3-205ENST00000578006 SPHKAPQ2M3C7 1700 aa30.65■■■□□ 2.5
RHBDL3-205ENST00000578006 MYO5BQ9ULV0 1848 aa30.65■■■□□ 2.5
RHBDL3-205ENST00000578006 EID1Q9Y6B2 187 aa30.65■■■□□ 2.5
RHBDL3-205ENST00000578006 TMEM131LA2VDJ0 1609 aa30.62■■■□□ 2.49
RHBDL3-205ENST00000578006 TXNDC2Q86VQ3 553 aa30.62■■■□□ 2.49
RHBDL3-205ENST00000578006 LTKP29376 864 aa30.6■■■□□ 2.49
RHBDL3-205ENST00000578006 CPS1P31327 1500 aa30.6■■■□□ 2.49
RHBDL3-205ENST00000578006 TRIM52Q96A61 297 aa30.53■■■□□ 2.48
RHBDL3-205ENST00000578006 TRPM2O94759 1503 aa30.52■■■□□ 2.48
RHBDL3-205ENST00000578006 ZFYVE9O95405 1425 aa30.51■■■□□ 2.48
RHBDL3-205ENST00000578006 RIMS2Q9UQ26 1411 aa30.49■■■□□ 2.47
RHBDL3-205ENST00000578006 STRCP1A6NGW2 1772 aa30.48■■■□□ 2.47
RHBDL3-205ENST00000578006 HDGFP51858 240 aaKnown RBP30.47■■■□□ 2.47
RHBDL3-205ENST00000578006 ACIN1Q9UKV3 1341 aaKnown RBP30.47■■■□□ 2.47
RHBDL3-205ENST00000578006 CHGAP10645 457 aaKnown RBP30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms