RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 ADAMTSL3P82987 1691 aa19.19■□□□□ 0.66
MKS1-206ENST00000577824 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
MKS1-206ENST00000577824 VWDEQ8N2E2 1590 aa19.18■□□□□ 0.66
MKS1-206ENST00000577824 ZC3H13Q5T200 1668 aaKnown RBP19.17■□□□□ 0.66
MKS1-206ENST00000577824 LMTK2Q8IWU2 1503 aa19.13■□□□□ 0.65
MKS1-206ENST00000577824 FER1L4A9Z1Z3 1794 aa19.13■□□□□ 0.65
MKS1-206ENST00000577824 MROH2AA6NES4 1674 aa19.12■□□□□ 0.65
MKS1-206ENST00000577824 MADDQ8WXG6 1647 aa19.12■□□□□ 0.65
MKS1-206ENST00000577824 SETD5Q9C0A6 1442 aa19.12■□□□□ 0.65
MKS1-206ENST00000577824 IQGAP3Q86VI3 1631 aa19.11■□□□□ 0.65
MKS1-206ENST00000577824 ARID4BQ4LE39 1312 aaPredicted RBP19.11■□□□□ 0.65
MKS1-206ENST00000577824 KIF3BO15066 747 aa19.11■□□□□ 0.65
MKS1-206ENST00000577824 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
MKS1-206ENST00000577824 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
MKS1-206ENST00000577824 ABCC3O15438 1527 aa19.1■□□□□ 0.65
MKS1-206ENST00000577824 CNTLNQ9NXG0 1405 aa19.09■□□□□ 0.65
MKS1-206ENST00000577824 CLTCQ00610 1675 aaKnown RBP19.07■□□□□ 0.64
MKS1-206ENST00000577824 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
MKS1-206ENST00000577824 ACIN1Q9UKV3 1341 aaKnown RBP19.06■□□□□ 0.64
MKS1-206ENST00000577824 CEP152O94986 1710 aa19.06■□□□□ 0.64
MKS1-206ENST00000577824 CAMSAP1Q5T5Y3 1602 aa19.05■□□□□ 0.64
MKS1-206ENST00000577824 HRCP23327 699 aa19.05■□□□□ 0.64
MKS1-206ENST00000577824 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
MKS1-206ENST00000577824 TET3O43151 1660 aa19.05■□□□□ 0.64
MKS1-206ENST00000577824 RIMS1Q86UR5 1692 aaKnown RBP19.05■□□□□ 0.64
MKS1-206ENST00000577824 GGT6Q6P531 493 aa19.04■□□□□ 0.64
MKS1-206ENST00000577824 KANK1Q14678 1352 aa19.04■□□□□ 0.64
MKS1-206ENST00000577824 ARHGAP31Q2M1Z3 1444 aa19.03■□□□□ 0.64
MKS1-206ENST00000577824 MLECQ14165 292 aa19.02■□□□□ 0.64
MKS1-206ENST00000577824 PZPP20742 1482 aa19.01■□□□□ 0.63
MKS1-206ENST00000577824 C3P01024 1663 aa19.01■□□□□ 0.63
MKS1-206ENST00000577824 KDM4FA0A1W2PPD8 638 aa19■□□□□ 0.63
MKS1-206ENST00000577824 PTPRMP28827 1452 aa18.99■□□□□ 0.63
MKS1-206ENST00000577824 RPRD2Q5VT52 1461 aaKnown RBP18.99■□□□□ 0.63
MKS1-206ENST00000577824 NUP155O75694 1391 aa18.99■□□□□ 0.63
MKS1-206ENST00000577824 WASHC2CQ9Y4E1 1318 aa18.98■□□□□ 0.63
MKS1-206ENST00000577824 NPATQ14207 1427 aa18.97■□□□□ 0.63
MKS1-206ENST00000577824 E9PCH4 1651 aa18.96■□□□□ 0.63
MKS1-206ENST00000577824 ZMYM3Q14202 1370 aa18.95■□□□□ 0.62
MKS1-206ENST00000577824 SPATA31D1Q6ZQQ2 1576 aa18.95■□□□□ 0.62
MKS1-206ENST00000577824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.621e-8■■■■■ 27.4
MKS1-206ENST00000577824 PREX1Q8TCU6 1659 aa18.93■□□□□ 0.62
MKS1-206ENST00000577824 ESF1Q9H501 851 aaKnown RBP18.93■□□□□ 0.62
MKS1-206ENST00000577824 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
MKS1-206ENST00000577824 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
MKS1-206ENST00000577824 NOS1P29475 1434 aa18.9■□□□□ 0.62
MKS1-206ENST00000577824 PTPRTO14522 1441 aa18.88■□□□□ 0.61
MKS1-206ENST00000577824 SYNMO15061 1565 aa18.88■□□□□ 0.61
MKS1-206ENST00000577824 SPHKAPQ2M3C7 1700 aa18.87■□□□□ 0.61
MKS1-206ENST00000577824 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
MKS1-206ENST00000577824 TRPM2O94759 1503 aa18.86■□□□□ 0.61
MKS1-206ENST00000577824 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
MKS1-206ENST00000577824 MYO3AQ8NEV4 1616 aa18.85■□□□□ 0.61
MKS1-206ENST00000577824 ZNF142P52746 1687 aaPredicted RBP18.85■□□□□ 0.61
MKS1-206ENST00000577824 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
MKS1-206ENST00000577824 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
MKS1-206ENST00000577824 CEBPAP49715 358 aaPredicted RBP18.82■□□□□ 0.6
MKS1-206ENST00000577824 PLA2R1Q13018 1463 aa18.82■□□□□ 0.6
MKS1-206ENST00000577824 NLRP1Q9C000 1473 aa18.82■□□□□ 0.6
MKS1-206ENST00000577824 TNRQ92752 1358 aa18.81■□□□□ 0.6
MKS1-206ENST00000577824 PKD2Q13563 968 aa18.81■□□□□ 0.6
MKS1-206ENST00000577824 KDM5AP29375 1690 aaKnown RBP18.8■□□□□ 0.6
MKS1-206ENST00000577824 DHX57Q6P158 1386 aaKnown RBP18.8■□□□□ 0.6
MKS1-206ENST00000577824 FBXO31Q5XUX0 539 aaPredicted RBP18.79■□□□□ 0.6
MKS1-206ENST00000577824 CEP170BQ9Y4F5 1589 aaPredicted RBP18.78■□□□□ 0.6
MKS1-206ENST00000577824 SETD1BQ9UPS6 1966 aaKnown RBP18.78■□□□□ 0.6
MKS1-206ENST00000577824 CLTCL1P53675 1640 aa18.77■□□□□ 0.6
MKS1-206ENST00000577824 A2ML1A8K2U0 1454 aa18.76■□□□□ 0.59
MKS1-206ENST00000577824 UGGT1Q9NYU2 1555 aa18.76■□□□□ 0.59
MKS1-206ENST00000577824 UHRF1BP1Q6BDS2 1440 aa18.75■□□□□ 0.59
MKS1-206ENST00000577824 ADGRB3O60242 1522 aa18.75■□□□□ 0.59
MKS1-206ENST00000577824 ANKRD30BQ9BXX2 1392 aa18.75■□□□□ 0.59
MKS1-206ENST00000577824 LMTK3Q96Q04 1460 aa18.75■□□□□ 0.59
MKS1-206ENST00000577824 NEURL4Q96JN8 1562 aa18.75■□□□□ 0.59
MKS1-206ENST00000577824 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
MKS1-206ENST00000577824 SLC52A1Q9NWF4 448 aa18.73■□□□□ 0.59
MKS1-206ENST00000577824 UBR1Q8IWV7 1749 aa18.73■□□□□ 0.59
MKS1-206ENST00000577824 TMEM131LA2VDJ0 1609 aa18.72■□□□□ 0.59
MKS1-206ENST00000577824 CCDC144AA2RUR9 1427 aa18.7■□□□□ 0.58
MKS1-206ENST00000577824 FOXD1Q16676 465 aa18.7■□□□□ 0.58
MKS1-206ENST00000577824 IDI1Q13907 227 aa18.67■□□□□ 0.58
MKS1-206ENST00000577824 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
MKS1-206ENST00000577824 SLIT1O75093 1534 aa18.66■□□□□ 0.58
MKS1-206ENST00000577824 KIF1BO60333 1816 aa18.66■□□□□ 0.58
MKS1-206ENST00000577824 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
MKS1-206ENST00000577824 ARHGAP23Q9P227 1491 aa18.65■□□□□ 0.58
MKS1-206ENST00000577824 CLSPNQ9HAW4 1339 aa18.64■□□□□ 0.57
MKS1-206ENST00000577824 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
MKS1-206ENST00000577824 ZFYVE9O95405 1425 aa18.61■□□□□ 0.57
MKS1-206ENST00000577824 IFT172Q9UG01 1749 aa18.6■□□□□ 0.57
MKS1-206ENST00000577824 NEXMIFQ5QGS0 1516 aa18.59■□□□□ 0.57
MKS1-206ENST00000577824 TMEM2Q9UHN6 1383 aa18.59■□□□□ 0.57
MKS1-206ENST00000577824 POLR1AO95602 1720 aaPredicted RBP18.58■□□□□ 0.57
MKS1-206ENST00000577824 THEMISQ8N1K5 641 aaPredicted RBP18.57■□□□□ 0.56
MKS1-206ENST00000577824 PPLO60437 1756 aa18.56■□□□□ 0.56
MKS1-206ENST00000577824 MED14O60244 1454 aa18.54■□□□□ 0.56
MKS1-206ENST00000577824 MYOM2P54296 1465 aa18.53■□□□□ 0.56
MKS1-206ENST00000577824 SCAF11Q99590 1463 aaKnown RBP18.53■□□□□ 0.56
MKS1-206ENST00000577824 STRCQ7RTU9 1775 aa18.53■□□□□ 0.56
MKS1-206ENST00000577824 RIMS2Q9UQ26 1411 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms