RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 ATP10AO60312 1499 aa12.19□□□□□ -0.46
CCL13-202ENST00000577681 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
CCL13-202ENST00000577681 AGLP35573 1532 aa12.18□□□□□ -0.46
CCL13-202ENST00000577681 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
CCL13-202ENST00000577681 FAM50AQ14320 339 aaKnown RBP12.18□□□□□ -0.46
CCL13-202ENST00000577681 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
CCL13-202ENST00000577681 NCOA1Q15788 1441 aa12.18□□□□□ -0.46
CCL13-202ENST00000577681 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
CCL13-202ENST00000577681 YEATS2Q9ULM3 1422 aa12.17□□□□□ -0.46
CCL13-202ENST00000577681 ANKRD30AQ9BXX3 1397 aa12.16□□□□□ -0.46
CCL13-202ENST00000577681 HSPA2P54652 639 aa12.15□□□□□ -0.46
CCL13-202ENST00000577681 DUOX2Q9NRD8 1548 aa12.15□□□□□ -0.46
CCL13-202ENST00000577681 DHX29Q7Z478 1369 aaKnown RBP12.15□□□□□ -0.46
CCL13-202ENST00000577681 A2MP01023 1474 aa12.14□□□□□ -0.47
CCL13-202ENST00000577681 EIF2AK4Q9P2K8 1649 aaKnown RBP12.14□□□□□ -0.47
CCL13-202ENST00000577681 ADAMTSL3P82987 1691 aa12.13□□□□□ -0.47
CCL13-202ENST00000577681 ERBINQ96RT1 1412 aa12.11□□□□□ -0.47
CCL13-202ENST00000577681 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
CCL13-202ENST00000577681 KIF15Q9NS87 1388 aa12.11□□□□□ -0.47
CCL13-202ENST00000577681 CERKQ8TCT0 537 aa12.11□□□□□ -0.47
CCL13-202ENST00000577681 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
CCL13-202ENST00000577681 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
CCL13-202ENST00000577681 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
CCL13-202ENST00000577681 DISP3Q9P2K9 1392 aa12.1□□□□□ -0.47
CCL13-202ENST00000577681 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
CCL13-202ENST00000577681 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
CCL13-202ENST00000577681 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
CCL13-202ENST00000577681 NAIPQ13075 1403 aa12.09□□□□□ -0.47
CCL13-202ENST00000577681 ACIN1Q9UKV3 1341 aaKnown RBP12.09□□□□□ -0.47
CCL13-202ENST00000577681 DEPDC5O75140 1603 aa12.08□□□□□ -0.48
CCL13-202ENST00000577681 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
CCL13-202ENST00000577681 HRCP23327 699 aa12.07□□□□□ -0.48
CCL13-202ENST00000577681 MLECQ14165 292 aa12.07□□□□□ -0.48
CCL13-202ENST00000577681 CHIC2Q9UKJ5 165 aa12.07□□□□□ -0.48
CCL13-202ENST00000577681 ANKRD50Q9ULJ7 1429 aa12.07□□□□□ -0.48
CCL13-202ENST00000577681 ILDR2Q71H61 639 aa12.06□□□□□ -0.48
CCL13-202ENST00000577681 RRP7BPQ9NSQ0 103 aa12.06□□□□□ -0.48
CCL13-202ENST00000577681 MYT1LQ9UL68 1186 aa12.06□□□□□ -0.48
CCL13-202ENST00000577681 SOCS7O14512 581 aa12.05□□□□□ -0.48
CCL13-202ENST00000577681 KDM5DQ9BY66 1539 aa12.05□□□□□ -0.48
CCL13-202ENST00000577681 MROH1Q8NDA8 1641 aa12.04□□□□□ -0.48
CCL13-202ENST00000577681 RIMS1Q86UR5 1692 aaKnown RBP12.04□□□□□ -0.48
CCL13-202ENST00000577681 PRDM15P57071 1507 aaPredicted RBP12.04□□□□□ -0.48
CCL13-202ENST00000577681 UNC13BO14795 1591 aa12.04□□□□□ -0.48
CCL13-202ENST00000577681 VWDEQ8N2E2 1590 aa12.04□□□□□ -0.48
CCL13-202ENST00000577681 ITGAEP38570 1179 aa12.03□□□□□ -0.48
CCL13-202ENST00000577681 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
CCL13-202ENST00000577681 ZC3H13Q5T200 1668 aaKnown RBP12.02□□□□□ -0.49
CCL13-202ENST00000577681 SETD5Q9C0A6 1442 aa12.02□□□□□ -0.49
CCL13-202ENST00000577681 LMTK2Q8IWU2 1503 aa12.01□□□□□ -0.49
CCL13-202ENST00000577681 MROH2AA6NES4 1674 aa12.01□□□□□ -0.49
CCL13-202ENST00000577681 KIF3BO15066 747 aa12.01□□□□□ -0.49
CCL13-202ENST00000577681 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
CCL13-202ENST00000577681 IQGAP3Q86VI3 1631 aa11.99□□□□□ -0.49
CCL13-202ENST00000577681 FER1L4A9Z1Z3 1794 aa11.99□□□□□ -0.49
CCL13-202ENST00000577681 ARHGAP31Q2M1Z3 1444 aa11.98□□□□□ -0.49
CCL13-202ENST00000577681 ABCC3O15438 1527 aa11.96□□□□□ -0.49
CCL13-202ENST00000577681 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
CCL13-202ENST00000577681 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
CCL13-202ENST00000577681 KANK1Q14678 1352 aa11.95□□□□□ -0.5
CCL13-202ENST00000577681 RAB3GAP2Q9H2M9 1393 aa11.95□□□□□ -0.5
CCL13-202ENST00000577681 TET3O43151 1660 aa11.95□□□□□ -0.5
CCL13-202ENST00000577681 CEBPAP49715 358 aaPredicted RBP11.95□□□□□ -0.5
CCL13-202ENST00000577681 GGT6Q6P531 493 aa11.95□□□□□ -0.5
CCL13-202ENST00000577681 SETD1BQ9UPS6 1966 aaKnown RBP11.95□□□□□ -0.5
CCL13-202ENST00000577681 CLTCQ00610 1675 aaKnown RBP11.94□□□□□ -0.5
CCL13-202ENST00000577681 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
CCL13-202ENST00000577681 CEP152O94986 1710 aa11.94□□□□□ -0.5
CCL13-202ENST00000577681 CAMSAP1Q5T5Y3 1602 aa11.93□□□□□ -0.5
CCL13-202ENST00000577681 WASHC2CQ9Y4E1 1318 aa11.93□□□□□ -0.5
CCL13-202ENST00000577681 C3P01024 1663 aa11.93□□□□□ -0.5
CCL13-202ENST00000577681 NUP155O75694 1391 aa11.92□□□□□ -0.5
CCL13-202ENST00000577681 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
CCL13-202ENST00000577681 EFCAB6Q5THR3 1501 aa11.92□□□□□ -0.5
CCL13-202ENST00000577681 PZPP20742 1482 aa11.92□□□□□ -0.5
CCL13-202ENST00000577681 NPATQ14207 1427 aa11.91□□□□□ -0.5
CCL13-202ENST00000577681 UHRF1BP1Q6BDS2 1440 aa11.9□□□□□ -0.5
CCL13-202ENST00000577681 SPATA31D1Q6ZQQ2 1576 aa11.9□□□□□ -0.5
CCL13-202ENST00000577681 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
CCL13-202ENST00000577681 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
CCL13-202ENST00000577681 E9PCH4 1651 aa11.89□□□□□ -0.51
CCL13-202ENST00000577681 PTPRTO14522 1441 aa11.87□□□□□ -0.51
CCL13-202ENST00000577681 NOS1P29475 1434 aa11.87□□□□□ -0.51
CCL13-202ENST00000577681 PREX1Q8TCU6 1659 aa11.87□□□□□ -0.51
CCL13-202ENST00000577681 MPHOSPH9Q99550 1183 aa11.86□□□□□ -0.51
CCL13-202ENST00000577681 ERVK-7P63135 1459 aa11.85□□□□□ -0.51
CCL13-202ENST00000577681 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
CCL13-202ENST00000577681 CFAP65Q6ZU64 1925 aaKnown RBP11.85□□□□□ -0.51
CCL13-202ENST00000577681 SPHKAPQ2M3C7 1700 aa11.84□□□□□ -0.51
CCL13-202ENST00000577681 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
CCL13-202ENST00000577681 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
CCL13-202ENST00000577681 PIK3C2BO00750 1634 aa11.83□□□□□ -0.52
CCL13-202ENST00000577681 NLRP1Q9C000 1473 aa11.83□□□□□ -0.52
CCL13-202ENST00000577681 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
CCL13-202ENST00000577681 SYNMO15061 1565 aa11.82□□□□□ -0.52
CCL13-202ENST00000577681 PLA2R1Q13018 1463 aa11.82□□□□□ -0.52
CCL13-202ENST00000577681 TRPM2O94759 1503 aa11.81□□□□□ -0.52
CCL13-202ENST00000577681 PKD2Q13563 968 aa11.81□□□□□ -0.52
CCL13-202ENST00000577681 SLC52A1Q9NWF4 448 aa11.81□□□□□ -0.52
CCL13-202ENST00000577681 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms