RNA–Protein interactions for RNA: ENST00000575842.5

ACTG1-210, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-210ENST00000575842 ST20-MTHFSA0A0A6YYL1 179 aa35.18■■■■□ 3.22
ACTG1-210ENST00000575842 NUP153P49790 1475 aaKnown RBP35.18■■■■□ 3.22
ACTG1-210ENST00000575842 PDS5BQ9NTI5 1447 aa35.17■■■■□ 3.22
ACTG1-210ENST00000575842 UBE2Q2Q8WVN8 375 aa35.16■■■■□ 3.22
ACTG1-210ENST00000575842 ANKRD30AQ9BXX3 1397 aa35.15■■■■□ 3.22
ACTG1-210ENST00000575842 CRBNQ96SW2 442 aa35.15■■■■□ 3.22
ACTG1-210ENST00000575842 ZBTB4Q9P1Z0 1013 aaPredicted RBP35.15■■■■□ 3.22
ACTG1-210ENST00000575842 KDM5DQ9BY66 1539 aa35.15■■■■□ 3.22
ACTG1-210ENST00000575842 KDM2BQ8NHM5 1336 aa35.14■■■■□ 3.22
ACTG1-210ENST00000575842 RAPGEF6Q8TEU7 1601 aa35.13■■■■□ 3.21
ACTG1-210ENST00000575842 KIAA0586Q9BVV6 1533 aa35.13■■■■□ 3.21
ACTG1-210ENST00000575842 CEP170Q5SW79 1584 aa35.12■■■■□ 3.21
ACTG1-210ENST00000575842 FRAT1Q92837 279 aaPredicted RBP35.11■■■■□ 3.21
ACTG1-210ENST00000575842 CDCA7LQ96GN5 454 aa35.11■■■■□ 3.21
ACTG1-210ENST00000575842 KIAA0556O60303 1618 aa35.1■■■■□ 3.21
ACTG1-210ENST00000575842 TROQ12816 1431 aaPredicted RBP35.1■■■■□ 3.21
ACTG1-210ENST00000575842 ANKRD50Q9ULJ7 1429 aa35.1■■■■□ 3.21
ACTG1-210ENST00000575842 DAXXQ9UER7 740 aaPredicted RBP35.09■■■■□ 3.21
ACTG1-210ENST00000575842 ADCY10Q96PN6 1610 aa35.08■■■■□ 3.21
ACTG1-210ENST00000575842 CENPQQ7L2Z9 268 aaPredicted RBP35.08■■■■□ 3.21
ACTG1-210ENST00000575842 ARID3CA6NKF2 412 aa35.07■■■■□ 3.2
ACTG1-210ENST00000575842 GPATCH8Q9UKJ3 1502 aaKnown RBP35.06■■■■□ 3.2
ACTG1-210ENST00000575842 PLIN1O60240 522 aa35.04■■■■□ 3.2
ACTG1-210ENST00000575842 FAM161AQ3B820 660 aa35.04■■■■□ 3.2
ACTG1-210ENST00000575842 CFDP1Q9UEE9 299 aaPredicted RBP35.04■■■■□ 3.2
ACTG1-210ENST00000575842 PER1O15534 1290 aaPredicted RBP35.04■■■■□ 3.2
ACTG1-210ENST00000575842 DISP1Q96F81 1524 aa35.02■■■■□ 3.2
ACTG1-210ENST00000575842 SHANK2Q9UPX8 1470 aa35.02■■■■□ 3.2
ACTG1-210ENST00000575842 ZNF608Q9ULD9 1512 aaPredicted RBP35.01■■■■□ 3.2
ACTG1-210ENST00000575842 TRPM1Q7Z4N2 1603 aa34.98■■■■□ 3.19
ACTG1-210ENST00000575842 NUP155O75694 1391 aa34.96■■■■□ 3.19
ACTG1-210ENST00000575842 PTPRGP23470 1445 aa34.96■■■■□ 3.19
ACTG1-210ENST00000575842 C8orf34Q49A92 452 aa34.96■■■■□ 3.19
ACTG1-210ENST00000575842 FAM43AQ8N2R8 423 aa34.96■■■■□ 3.19
ACTG1-210ENST00000575842 LAMC1P11047 1609 aa34.95■■■■□ 3.19
ACTG1-210ENST00000575842 SKAP1Q86WV1 359 aa34.95■■■■□ 3.19
ACTG1-210ENST00000575842 COL17A1Q9UMD9 1497 aaPredicted RBP34.94■■■■□ 3.18
ACTG1-210ENST00000575842 PRG4Q92954 1404 aaPredicted RBP34.94■■■■□ 3.18
ACTG1-210ENST00000575842 SLC4A3P48751 1232 aa34.92■■■■□ 3.18
ACTG1-210ENST00000575842 RSPH6AQ9H0K4 717 aa34.92■■■■□ 3.18
ACTG1-210ENST00000575842 GPRASP1Q5JY77 1395 aa34.9■■■■□ 3.18
ACTG1-210ENST00000575842 DCAF11Q8TEB1 546 aa34.9■■■■□ 3.18
ACTG1-210ENST00000575842 PRAG1Q86YV5 1406 aa34.9■■■■□ 3.18
ACTG1-210ENST00000575842 KDM2AQ9Y2K7 1162 aa34.88■■■■□ 3.17
ACTG1-210ENST00000575842 EIF4G3O43432 1585 aaKnown RBP34.87■■■■□ 3.17
ACTG1-210ENST00000575842 C20orf194Q5TEA3 1177 aa34.86■■■■□ 3.17
ACTG1-210ENST00000575842 CDC42BPAQ5VT25 1732 aa34.85■■■■□ 3.17
ACTG1-210ENST00000575842 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
ACTG1-210ENST00000575842 FRAT2O75474 233 aaPredicted RBP34.83■■■■□ 3.17
ACTG1-210ENST00000575842 C9orf84Q5VXU9 1444 aa34.83■■■■□ 3.17
ACTG1-210ENST00000575842 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.82■■■■□ 3.16
ACTG1-210ENST00000575842 PRDM15P57071 1507 aaPredicted RBP34.81■■■■□ 3.16
ACTG1-210ENST00000575842 VIRMAQ69YN4 1812 aaKnown RBP34.81■■■■□ 3.16
ACTG1-210ENST00000575842 CLASP1Q7Z460 1538 aa34.79■■■■□ 3.16
ACTG1-210ENST00000575842 DUSP27Q5VZP5 1158 aa34.77■■■■□ 3.16
ACTG1-210ENST00000575842 ZNF777Q9ULD5 760 aaPredicted RBP34.76■■■■□ 3.15
ACTG1-210ENST00000575842 EIF3AQ14152 1382 aaKnown RBP34.75■■■■□ 3.15
ACTG1-210ENST00000575842 ZNF521Q96K83 1311 aa34.74■■■■□ 3.15
ACTG1-210ENST00000575842 CC2D1BQ5T0F9 858 aaKnown RBP34.74■■■■□ 3.15
ACTG1-210ENST00000575842 EIF5BO60841 1220 aaKnown RBP34.72■■■■□ 3.15
ACTG1-210ENST00000575842 TESK2Q96S53 571 aa34.72■■■■□ 3.15
ACTG1-210ENST00000575842 ERBINQ96RT1 1412 aa34.71■■■■□ 3.15
ACTG1-210ENST00000575842 DISP3Q9P2K9 1392 aa34.7■■■■□ 3.15
ACTG1-210ENST00000575842 EIF2AK4Q9P2K8 1649 aaKnown RBP34.7■■■■□ 3.15
ACTG1-210ENST00000575842 PANK3Q9H999 370 aa34.7■■■■□ 3.14
ACTG1-210ENST00000575842 PLEKHH1Q9ULM0 1364 aa34.68■■■■□ 3.14
ACTG1-210ENST00000575842 ARHGEF5Q12774 1597 aa34.68■■■■□ 3.14
ACTG1-210ENST00000575842 ADAMTS8Q9UP79 889 aa34.67■■■■□ 3.14
ACTG1-210ENST00000575842 FAM135AQ9P2D6 1515 aa34.67■■■■□ 3.14
ACTG1-210ENST00000575842 ABCC10Q5T3U5 1492 aa34.66■■■■□ 3.14
ACTG1-210ENST00000575842 GOLGA2Q08379 1002 aa34.65■■■■□ 3.14
ACTG1-210ENST00000575842 CCDC144AA2RUR9 1427 aa34.65■■■■□ 3.14
ACTG1-210ENST00000575842 NUP160Q12769 1436 aa34.62■■■■□ 3.13
ACTG1-210ENST00000575842 TSPY4P0CV99 314 aa34.61■■■■□ 3.13
ACTG1-210ENST00000575842 TSPY10P0CW01 314 aa34.61■■■■□ 3.13
ACTG1-210ENST00000575842 TMF1P82094 1093 aa34.61■■■■□ 3.13
ACTG1-210ENST00000575842 A2MP01023 1474 aa34.61■■■■□ 3.13
ACTG1-210ENST00000575842 NBPF1Q3BBV0 1214 aa34.61■■■■□ 3.13
ACTG1-210ENST00000575842 PLB1Q6P1J6 1458 aa34.59■■■■□ 3.13
ACTG1-210ENST00000575842 L1TD1Q5T7N2 865 aaKnown RBP34.59■■■■□ 3.13
ACTG1-210ENST00000575842 USP19O94966 1318 aa34.58■■■■□ 3.13
ACTG1-210ENST00000575842 RGS3P49796 1198 aa34.58■■■■□ 3.13
ACTG1-210ENST00000575842 TRMT2AQ8IZ69 625 aaKnown RBP34.58■■■■□ 3.13
ACTG1-210ENST00000575842 SLFN5Q08AF3 891 aa34.58■■■■□ 3.13
ACTG1-210ENST00000575842 SYNJ2O15056 1496 aa34.57■■■■□ 3.12
ACTG1-210ENST00000575842 BECN1Q14457 450 aa34.56■■■■□ 3.12
ACTG1-210ENST00000575842 WDR43Q15061 677 aaKnown RBP eCLIP34.56■■■■□ 3.12
ACTG1-210ENST00000575842 GRIN2AQ12879 1464 aa34.56■■■■□ 3.12
ACTG1-210ENST00000575842 CCDC141Q6ZP82 1450 aa34.56■■■■□ 3.12
ACTG1-210ENST00000575842 RNF17Q9BXT8 1623 aaKnown RBP34.52■■■■□ 3.12
ACTG1-210ENST00000575842 PPP2R1AP30153 589 aa34.52■■■■□ 3.12
ACTG1-210ENST00000575842 MYO5CQ9NQX4 1742 aa34.52■■■■□ 3.12
ACTG1-210ENST00000575842 PIK3C2GO75747 1445 aa34.51■■■■□ 3.11
ACTG1-210ENST00000575842 MAPK8IP3Q9UPT6 1336 aa34.51■■■■□ 3.11
ACTG1-210ENST00000575842 NKTRP30414 1462 aaKnown RBP34.51■■■■□ 3.11
ACTG1-210ENST00000575842 WDR7Q9Y4E6 1490 aa34.5■■■■□ 3.11
ACTG1-210ENST00000575842 UNC13BO14795 1591 aa34.49■■■■□ 3.11
ACTG1-210ENST00000575842 PLA2R1Q13018 1463 aa34.49■■■■□ 3.11
ACTG1-210ENST00000575842 IFT140Q96RY7 1462 aa34.49■■■■□ 3.11
ACTG1-210ENST00000575842 ABCC2Q92887 1545 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms