RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-210ENST00000575507 PPARGC1BQ86YN6 1023 aaKnown RBP22.03■■□□□ 1.12
EDC4-210ENST00000575507 CHIC2Q9UKJ5 165 aa22.03■■□□□ 1.12
EDC4-210ENST00000575507 STRCQ7RTU9 1775 aa22.01■■□□□ 1.11
EDC4-210ENST00000575507 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
EDC4-210ENST00000575507 SHANK2Q9UPX8 1470 aa21.98■■□□□ 1.11
EDC4-210ENST00000575507 KDM5DQ9BY66 1539 aa21.98■■□□□ 1.11
EDC4-210ENST00000575507 FAM50AQ14320 339 aaKnown RBP21.98■■□□□ 1.11
EDC4-210ENST00000575507 DNMT1P26358 1616 aaKnown RBP21.98■■□□□ 1.11
EDC4-210ENST00000575507 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
EDC4-210ENST00000575507 NCOA1Q15788 1441 aa21.95■■□□□ 1.1
EDC4-210ENST00000575507 PZPP20742 1482 aa21.95■■□□□ 1.1
EDC4-210ENST00000575507 MROH1Q8NDA8 1641 aa21.95■■□□□ 1.1
EDC4-210ENST00000575507 RNF17Q9BXT8 1623 aaKnown RBP21.95■■□□□ 1.1
EDC4-210ENST00000575507 CROCC2H7BZ55 1655 aa21.95■■□□□ 1.1
EDC4-210ENST00000575507 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
EDC4-210ENST00000575507 NCKAP5LQ9HCH0 1330 aa21.94■■□□□ 1.1
EDC4-210ENST00000575507 CAMSAP1Q5T5Y3 1602 aa21.92■■□□□ 1.1
EDC4-210ENST00000575507 MYO3AQ8NEV4 1616 aa21.92■■□□□ 1.1
EDC4-210ENST00000575507 ABCC3O15438 1527 aa21.92■■□□□ 1.1
EDC4-210ENST00000575507 FAM135AQ9P2D6 1515 aa21.92■■□□□ 1.1
EDC4-210ENST00000575507 TNRQ92752 1358 aa21.92■■□□□ 1.1
EDC4-210ENST00000575507 EIF2AK4Q9P2K8 1649 aaKnown RBP21.91■■□□□ 1.1
EDC4-210ENST00000575507 ANKRD30AQ9BXX3 1397 aa21.91■■□□□ 1.1
EDC4-210ENST00000575507 PTPRTO14522 1441 aa21.9■■□□□ 1.1
EDC4-210ENST00000575507 FBXO41Q8TF61 875 aa21.9■■□□□ 1.1
EDC4-210ENST00000575507 CEP170BQ9Y4F5 1589 aaPredicted RBP21.9■■□□□ 1.1
EDC4-210ENST00000575507 ERBINQ96RT1 1412 aa21.89■■□□□ 1.1
EDC4-210ENST00000575507 CERKQ8TCT0 537 aa21.89■■□□□ 1.09
EDC4-210ENST00000575507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.89■■□□□ 1.09
EDC4-210ENST00000575507 A2ML1A8K2U0 1454 aa21.88■■□□□ 1.09
EDC4-210ENST00000575507 ZNF142P52746 1687 aaPredicted RBP21.86■■□□□ 1.09
EDC4-210ENST00000575507 ADGRL2O95490 1459 aa21.85■■□□□ 1.09
EDC4-210ENST00000575507 PLA2R1Q13018 1463 aa21.83■■□□□ 1.09
EDC4-210ENST00000575507 PKD2Q13563 968 aa21.83■■□□□ 1.09
EDC4-210ENST00000575507 PRDM15P57071 1507 aaPredicted RBP21.82■■□□□ 1.08
EDC4-210ENST00000575507 ERVK-7P63135 1459 aa21.81■■□□□ 1.08
EDC4-210ENST00000575507 CEP152O94986 1710 aa21.8■■□□□ 1.08
EDC4-210ENST00000575507 ZC3H13Q5T200 1668 aaKnown RBP21.8■■□□□ 1.08
EDC4-210ENST00000575507 SPATA31D1Q6ZQQ2 1576 aa21.8■■□□□ 1.08
EDC4-210ENST00000575507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.8■■□□□ 1.08
EDC4-210ENST00000575507 ARHGAP31Q2M1Z3 1444 aa21.79■■□□□ 1.08
EDC4-210ENST00000575507 NLRP1Q9C000 1473 aa21.78■■□□□ 1.08
EDC4-210ENST00000575507 DEPDC5O75140 1603 aa21.78■■□□□ 1.08
EDC4-210ENST00000575507 ITGAEP38570 1179 aa21.78■■□□□ 1.08
EDC4-210ENST00000575507 THEMISQ8N1K5 641 aaPredicted RBP21.77■■□□□ 1.08
EDC4-210ENST00000575507 ANKRD50Q9ULJ7 1429 aa21.77■■□□□ 1.08
EDC4-210ENST00000575507 VWDEQ8N2E2 1590 aa21.76■■□□□ 1.07
EDC4-210ENST00000575507 LTBP4Q8N2S1 1624 aa21.76■■□□□ 1.07
EDC4-210ENST00000575507 ZNF335Q9H4Z2 1342 aaPredicted RBP21.76■■□□□ 1.07
EDC4-210ENST00000575507 KANK1Q14678 1352 aa21.75■■□□□ 1.07
EDC4-210ENST00000575507 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
EDC4-210ENST00000575507 LMTK2Q8IWU2 1503 aa21.72■■□□□ 1.07
EDC4-210ENST00000575507 ANKLE2Q86XL3 938 aa21.72■■□□□ 1.07
EDC4-210ENST00000575507 ROCK1Q13464 1354 aa21.72■■□□□ 1.07
EDC4-210ENST00000575507 NEURL4Q96JN8 1562 aa21.7■■□□□ 1.06
EDC4-210ENST00000575507 IDI1Q13907 227 aa21.68■■□□□ 1.06
EDC4-210ENST00000575507 CFAP65Q6ZU64 1925 aaKnown RBP21.67■■□□□ 1.06
EDC4-210ENST00000575507 RRBP1Q9P2E9 1410 aaKnown RBP21.66■■□□□ 1.06
EDC4-210ENST00000575507 LTKP29376 864 aa21.65■■□□□ 1.06
EDC4-210ENST00000575507 NOS1P29475 1434 aa21.64■■□□□ 1.06
EDC4-210ENST00000575507 MED14O60244 1454 aa21.64■■□□□ 1.05
EDC4-210ENST00000575507 EFCAB6Q5THR3 1501 aa21.63■■□□□ 1.05
EDC4-210ENST00000575507 NPHP4O75161 1426 aaPredicted RBP21.63■■□□□ 1.05
EDC4-210ENST00000575507 SYNMO15061 1565 aa21.61■■□□□ 1.05
EDC4-210ENST00000575507 UBR1Q8IWV7 1749 aa21.61■■□□□ 1.05
EDC4-210ENST00000575507 TXNDC2Q86VQ3 553 aa21.6■■□□□ 1.05
EDC4-210ENST00000575507 POLR1AO95602 1720 aaPredicted RBP21.6■■□□□ 1.05
EDC4-210ENST00000575507 ARHGAP23Q9P227 1491 aa21.59■■□□□ 1.05
EDC4-210ENST00000575507 UNC13BO14795 1591 aa21.59■■□□□ 1.05
EDC4-210ENST00000575507 PIK3C2BO00750 1634 aa21.58■■□□□ 1.05
EDC4-210ENST00000575507 SLIT1O75093 1534 aa21.57■■□□□ 1.04
EDC4-210ENST00000575507 NUP155O75694 1391 aa21.57■■□□□ 1.04
EDC4-210ENST00000575507 SLC52A1Q9NWF4 448 aa21.56■■□□□ 1.04
EDC4-210ENST00000575507 STAG3Q9UJ98 1225 aa21.56■■□□□ 1.04
EDC4-210ENST00000575507 TMEM2Q9UHN6 1383 aa21.56■■□□□ 1.04
EDC4-210ENST00000575507 RPRD2Q5VT52 1461 aaKnown RBP21.55■■□□□ 1.04
EDC4-210ENST00000575507 SCAF11Q99590 1463 aaKnown RBP21.55■■□□□ 1.04
EDC4-210ENST00000575507 IQSEC2Q5JU85 1478 aa21.54■■□□□ 1.04
EDC4-210ENST00000575507 TET3O43151 1660 aa21.53■■□□□ 1.04
EDC4-210ENST00000575507 EID1Q9Y6B2 187 aa21.52■■□□□ 1.04
EDC4-210ENST00000575507 NAIPQ13075 1403 aa21.52■■□□□ 1.04
EDC4-210ENST00000575507 IQGAP1P46940 1657 aa21.51■■□□□ 1.03
EDC4-210ENST00000575507 IQGAP3Q86VI3 1631 aa21.5■■□□□ 1.03
EDC4-210ENST00000575507 UBAP1LF5GYI3 381 aa21.49■■□□□ 1.03
EDC4-210ENST00000575507 E9PCH4 1651 aa21.49■■□□□ 1.03
EDC4-210ENST00000575507 GCC2Q8IWJ2 1684 aa21.47■■□□□ 1.03
EDC4-210ENST00000575507 ADGRB3O60242 1522 aa21.46■■□□□ 1.03
EDC4-210ENST00000575507 CPS1P31327 1500 aa21.46■■□□□ 1.03
EDC4-210ENST00000575507 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
EDC4-210ENST00000575507 KDM5AP29375 1690 aaKnown RBP21.45■■□□□ 1.02
EDC4-210ENST00000575507 SLC26A8Q96RN1 970 aa21.45■■□□□ 1.02
EDC4-210ENST00000575507 STRCP1A6NGW2 1772 aa21.44■■□□□ 1.02
EDC4-210ENST00000575507 CHGAP10645 457 aaKnown RBP21.43■■□□□ 1.02
EDC4-210ENST00000575507 HFM1A2PYH4 1435 aa21.42■■□□□ 1.02
EDC4-210ENST00000575507 ZFYVE9O95405 1425 aa21.42■■□□□ 1.02
EDC4-210ENST00000575507 TMEM131LA2VDJ0 1609 aa21.41■■□□□ 1.02
EDC4-210ENST00000575507 LRRC7Q96NW7 1537 aa21.41■■□□□ 1.02
EDC4-210ENST00000575507 NUTM2DQ5VT03 806 aaPredicted RBP21.4■■□□□ 1.02
EDC4-210ENST00000575507 RIMS2Q9UQ26 1411 aa21.39■■□□□ 1.02
EDC4-210ENST00000575507 TRIM52Q96A61 297 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms