RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MLECQ14165 292 aa13.64□□□□□ -0.23
SMG6-216ENST00000575176 RSPH4AQ5TD94 716 aa13.63□□□□□ -0.23
SMG6-216ENST00000575176 ERBINQ96RT1 1412 aa13.63□□□□□ -0.23
SMG6-216ENST00000575176 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
SMG6-216ENST00000575176 UNC13BO14795 1591 aa13.62□□□□□ -0.23
SMG6-216ENST00000575176 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
SMG6-216ENST00000575176 NPATQ14207 1427 aa13.61□□□□□ -0.23
SMG6-216ENST00000575176 PZPP20742 1482 aa13.61□□□□□ -0.23
SMG6-216ENST00000575176 KIF15Q9NS87 1388 aa13.6□□□□□ -0.23
SMG6-216ENST00000575176 GCC2Q8IWJ2 1684 aa13.6□□□□□ -0.23
SMG6-216ENST00000575176 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
SMG6-216ENST00000575176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMG6-216ENST00000575176 CEP170BQ9Y4F5 1589 aaPredicted RBP13.59□□□□□ -0.23
SMG6-216ENST00000575176 APLP2Q06481 763 aa13.59□□□□□ -0.23
SMG6-216ENST00000575176 LMTK2Q8IWU2 1503 aa13.59□□□□□ -0.23
SMG6-216ENST00000575176 CEBPAP49715 358 aaPredicted RBP13.58□□□□□ -0.24
SMG6-216ENST00000575176 ZMYM3Q14202 1370 aa13.57□□□□□ -0.24
SMG6-216ENST00000575176 EFCAB6Q5THR3 1501 aa13.56□□□□□ -0.24
SMG6-216ENST00000575176 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
SMG6-216ENST00000575176 IQGAP3Q86VI3 1631 aa13.54□□□□□ -0.24
SMG6-216ENST00000575176 POLR1AO95602 1720 aaPredicted RBP13.54□□□□□ -0.24
SMG6-216ENST00000575176 UHRF1BP1Q6BDS2 1440 aa13.54□□□□□ -0.24
SMG6-216ENST00000575176 SYNMO15061 1565 aa13.54□□□□□ -0.24
SMG6-216ENST00000575176 TET3O43151 1660 aa13.53□□□□□ -0.24
SMG6-216ENST00000575176 TSPY4P0CV99 314 aa13.53□□□□□ -0.24
SMG6-216ENST00000575176 TSPY10P0CW01 314 aa13.53□□□□□ -0.24
SMG6-216ENST00000575176 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
SMG6-216ENST00000575176 ERVK-7P63135 1459 aa13.53□□□□□ -0.24
SMG6-216ENST00000575176 NEURL4Q96JN8 1562 aa13.53□□□□□ -0.24
SMG6-216ENST00000575176 UBR1Q8IWV7 1749 aa13.53□□□□□ -0.24
SMG6-216ENST00000575176 KIF3BO15066 747 aa13.52□□□□□ -0.25
SMG6-216ENST00000575176 E9PCH4 1651 aa13.51□□□□□ -0.25
SMG6-216ENST00000575176 ARHGAP31Q2M1Z3 1444 aa13.51□□□□□ -0.25
SMG6-216ENST00000575176 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
SMG6-216ENST00000575176 PPARGC1BQ86YN6 1023 aaKnown RBP13.51□□□□□ -0.25
SMG6-216ENST00000575176 PPP6R1Q9UPN7 881 aa13.51□□□□□ -0.25
SMG6-216ENST00000575176 CFAP65Q6ZU64 1925 aaKnown RBP13.51□□□□□ -0.25
SMG6-216ENST00000575176 GGT6Q6P531 493 aa13.5□□□□□ -0.25
SMG6-216ENST00000575176 KDM5AP29375 1690 aaKnown RBP13.5□□□□□ -0.25
SMG6-216ENST00000575176 PIK3C2BO00750 1634 aa13.5□□□□□ -0.25
SMG6-216ENST00000575176 A2ML1A8K2U0 1454 aa13.49□□□□□ -0.25
SMG6-216ENST00000575176 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
SMG6-216ENST00000575176 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
SMG6-216ENST00000575176 HSPA2P54652 639 aa13.48□□□□□ -0.25
SMG6-216ENST00000575176 RRP7BPQ9NSQ0 103 aa13.47□□□□□ -0.25
SMG6-216ENST00000575176 MYO5BQ9ULV0 1848 aa13.47□□□□□ -0.25
SMG6-216ENST00000575176 FAM50AQ14320 339 aaKnown RBP13.46□□□□□ -0.25
SMG6-216ENST00000575176 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
SMG6-216ENST00000575176 NLRP1Q9C000 1473 aa13.45□□□□□ -0.26
SMG6-216ENST00000575176 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
SMG6-216ENST00000575176 NOS1P29475 1434 aa13.45□□□□□ -0.26
SMG6-216ENST00000575176 NAIPQ13075 1403 aa13.44□□□□□ -0.26
SMG6-216ENST00000575176 TNRQ92752 1358 aa13.44□□□□□ -0.26
SMG6-216ENST00000575176 FBXO31Q5XUX0 539 aaPredicted RBP13.43□□□□□ -0.26
SMG6-216ENST00000575176 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
SMG6-216ENST00000575176 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
SMG6-216ENST00000575176 UGGT1Q9NYU2 1555 aa13.42□□□□□ -0.26
SMG6-216ENST00000575176 LTBP4Q8N2S1 1624 aa13.42□□□□□ -0.26
SMG6-216ENST00000575176 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
SMG6-216ENST00000575176 HFM1A2PYH4 1435 aa13.41□□□□□ -0.26
SMG6-216ENST00000575176 ARHGAP23Q9P227 1491 aa13.41□□□□□ -0.26
SMG6-216ENST00000575176 ADGRB3O60242 1522 aa13.4□□□□□ -0.26
SMG6-216ENST00000575176 SLIT1O75093 1534 aa13.4□□□□□ -0.26
SMG6-216ENST00000575176 PTPRTO14522 1441 aa13.39□□□□□ -0.27
SMG6-216ENST00000575176 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
SMG6-216ENST00000575176 ESF1Q9H501 851 aaKnown RBP13.39□□□□□ -0.27
SMG6-216ENST00000575176 IQGAP1P46940 1657 aa13.39□□□□□ -0.27
SMG6-216ENST00000575176 STRCP1A6NGW2 1772 aa13.39□□□□□ -0.27
SMG6-216ENST00000575176 MED14O60244 1454 aa13.37□□□□□ -0.27
SMG6-216ENST00000575176 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
SMG6-216ENST00000575176 TRPM2O94759 1503 aa13.34□□□□□ -0.27
SMG6-216ENST00000575176 KANK1Q14678 1352 aa13.33□□□□□ -0.27
SMG6-216ENST00000575176 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
SMG6-216ENST00000575176 ZFYVE9O95405 1425 aa13.3□□□□□ -0.28
SMG6-216ENST00000575176 ITGAEP38570 1179 aa13.3□□□□□ -0.28
SMG6-216ENST00000575176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.286e-8■■■■□ 25.6
SMG6-216ENST00000575176 NRXN3Q9Y4C0 1643 aa13.29□□□□□ -0.28
SMG6-216ENST00000575176 SCAF11Q99590 1463 aaKnown RBP13.29□□□□□ -0.28
SMG6-216ENST00000575176 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
SMG6-216ENST00000575176 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
SMG6-216ENST00000575176 IFT172Q9UG01 1749 aa13.27□□□□□ -0.28
SMG6-216ENST00000575176 NUP155O75694 1391 aa13.27□□□□□ -0.29
SMG6-216ENST00000575176 NWD1Q149M9 1564 aa13.27□□□□□ -0.29
SMG6-216ENST00000575176 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.29
SMG6-216ENST00000575176 NPHP4O75161 1426 aaPredicted RBP13.26□□□□□ -0.29
SMG6-216ENST00000575176 KIF1BO60333 1816 aa13.25□□□□□ -0.29
SMG6-216ENST00000575176 IQSEC2Q5JU85 1478 aa13.25□□□□□ -0.29
SMG6-216ENST00000575176 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
SMG6-216ENST00000575176 PKD2Q13563 968 aa13.25□□□□□ -0.29
SMG6-216ENST00000575176 NEXMIFQ5QGS0 1516 aa13.24□□□□□ -0.29
SMG6-216ENST00000575176 PPLO60437 1756 aa13.23□□□□□ -0.29
SMG6-216ENST00000575176 IDI1Q13907 227 aa13.23□□□□□ -0.29
SMG6-216ENST00000575176 CHD2O14647 1828 aaKnown RBP13.22□□□□□ -0.29
SMG6-216ENST00000575176 ZNF335Q9H4Z2 1342 aaPredicted RBP13.21□□□□□ -0.29
SMG6-216ENST00000575176 LTKP29376 864 aa13.21□□□□□ -0.29
SMG6-216ENST00000575176 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
SMG6-216ENST00000575176 CPS1P31327 1500 aa13.2□□□□□ -0.3
SMG6-216ENST00000575176 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
SMG6-216ENST00000575176 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
SMG6-216ENST00000575176 DMRT2Q9Y5R5 561 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms