RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 LTBP4Q8N2S1 1624 aa24.02■■□□□ 1.44
CTNS-209ENST00000574776 ZNF142P52746 1687 aaPredicted RBP24.01■■□□□ 1.43
CTNS-209ENST00000574776 MAP3K1Q13233 1512 aa24■■□□□ 1.43
CTNS-209ENST00000574776 PLA2R1Q13018 1463 aa23.99■■□□□ 1.43
CTNS-209ENST00000574776 A2ML1A8K2U0 1454 aa23.97■■□□□ 1.43
CTNS-209ENST00000574776 TNRQ92752 1358 aa23.97■■□□□ 1.43
CTNS-209ENST00000574776 ZNF335Q9H4Z2 1342 aaPredicted RBP23.97■■□□□ 1.43
CTNS-209ENST00000574776 KDM5DQ9BY66 1539 aa23.96■■□□□ 1.43
CTNS-209ENST00000574776 TCOF1Q13428 1488 aaKnown RBP23.95■■□□□ 1.42
CTNS-209ENST00000574776 MYOM3Q5VTT5 1437 aa23.95■■□□□ 1.42
CTNS-209ENST00000574776 PZPP20742 1482 aa23.94■■□□□ 1.42
CTNS-209ENST00000574776 MIA2Q96PC5 1412 aa23.94■■□□□ 1.42
CTNS-209ENST00000574776 APLP2Q06481 763 aa23.94■■□□□ 1.42
CTNS-209ENST00000574776 DNMT1P26358 1616 aaKnown RBP23.94■■□□□ 1.42
CTNS-209ENST00000574776 FAM135AQ9P2D6 1515 aa23.91■■□□□ 1.42
CTNS-209ENST00000574776 MAST1Q9Y2H9 1570 aa23.91■■□□□ 1.42
CTNS-209ENST00000574776 IQSEC2Q5JU85 1478 aa23.89■■□□□ 1.42
CTNS-209ENST00000574776 THEMISQ8N1K5 641 aaPredicted RBP23.88■■□□□ 1.41
CTNS-209ENST00000574776 ANKLE2Q86XL3 938 aa23.85■■□□□ 1.41
CTNS-209ENST00000574776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.85■■□□□ 1.41
CTNS-209ENST00000574776 UBAP1LF5GYI3 381 aa23.84■■□□□ 1.41
CTNS-209ENST00000574776 RNF17Q9BXT8 1623 aaKnown RBP23.84■■□□□ 1.41
CTNS-209ENST00000574776 RRP7BPQ9NSQ0 103 aa23.83■■□□□ 1.41
CTNS-209ENST00000574776 ABCC3O15438 1527 aa23.83■■□□□ 1.41
CTNS-209ENST00000574776 NLRP1Q9C000 1473 aa23.82■■□□□ 1.4
CTNS-209ENST00000574776 ABCC5O15440 1437 aa23.81■■□□□ 1.4
CTNS-209ENST00000574776 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
CTNS-209ENST00000574776 DUOX2Q9NRD8 1548 aa23.79■■□□□ 1.4
CTNS-209ENST00000574776 UGGT1Q9NYU2 1555 aa23.79■■□□□ 1.4
CTNS-209ENST00000574776 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
CTNS-209ENST00000574776 CFAP65Q6ZU64 1925 aaKnown RBP23.78■■□□□ 1.4
CTNS-209ENST00000574776 KIF15Q9NS87 1388 aa23.78■■□□□ 1.4
CTNS-209ENST00000574776 DISP3Q9P2K9 1392 aa23.78■■□□□ 1.4
CTNS-209ENST00000574776 NEURL4Q96JN8 1562 aa23.78■■□□□ 1.4
CTNS-209ENST00000574776 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
CTNS-209ENST00000574776 MROH1Q8NDA8 1641 aa23.77■■□□□ 1.4
CTNS-209ENST00000574776 ZC3H13Q5T200 1668 aaKnown RBP23.76■■□□□ 1.39
CTNS-209ENST00000574776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.76■■□□□ 1.39
CTNS-209ENST00000574776 CHIC2Q9UKJ5 165 aa23.75■■□□□ 1.39
CTNS-209ENST00000574776 ERVK-7P63135 1459 aa23.75■■□□□ 1.39
CTNS-209ENST00000574776 SPATA31D1Q6ZQQ2 1576 aa23.74■■□□□ 1.39
CTNS-209ENST00000574776 DAPK1P53355 1430 aa23.74■■□□□ 1.39
CTNS-209ENST00000574776 FGD6Q6ZV73 1430 aa23.74■■□□□ 1.39
CTNS-209ENST00000574776 CEP152O94986 1710 aa23.73■■□□□ 1.39
CTNS-209ENST00000574776 SHANK2Q9UPX8 1470 aa23.73■■□□□ 1.39
CTNS-209ENST00000574776 NPHP4O75161 1426 aaPredicted RBP23.72■■□□□ 1.39
CTNS-209ENST00000574776 CROCC2H7BZ55 1655 aa23.71■■□□□ 1.39
CTNS-209ENST00000574776 MED14O60244 1454 aa23.7■■□□□ 1.38
CTNS-209ENST00000574776 ERBINQ96RT1 1412 aa23.7■■□□□ 1.38
CTNS-209ENST00000574776 ILDR2Q71H61 639 aa23.69■■□□□ 1.38
CTNS-209ENST00000574776 DEPDC5O75140 1603 aa23.68■■□□□ 1.38
CTNS-209ENST00000574776 CPS1P31327 1500 aa23.68■■□□□ 1.38
CTNS-209ENST00000574776 ANKRD30AQ9BXX3 1397 aa23.66■■□□□ 1.38
CTNS-209ENST00000574776 SCAF1Q9H7N4 1312 aaKnown RBP23.66■■□□□ 1.38
CTNS-209ENST00000574776 TOM1O60784 492 aa23.66■■□□□ 1.38
CTNS-209ENST00000574776 PIP4K2BP78356 416 aa23.66■■□□□ 1.38
CTNS-209ENST00000574776 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
CTNS-209ENST00000574776 VWDEQ8N2E2 1590 aa23.65■■□□□ 1.38
CTNS-209ENST00000574776 KANK1Q14678 1352 aa23.65■■□□□ 1.38
CTNS-209ENST00000574776 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.38
CTNS-209ENST00000574776 FAM50AQ14320 339 aaKnown RBP23.64■■□□□ 1.37
CTNS-209ENST00000574776 IQGAP1P46940 1657 aa23.63■■□□□ 1.37
CTNS-209ENST00000574776 LTKP29376 864 aa23.62■■□□□ 1.37
CTNS-209ENST00000574776 TXNDC2Q86VQ3 553 aa23.62■■□□□ 1.37
CTNS-209ENST00000574776 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
CTNS-209ENST00000574776 HSPA1LP34931 641 aa23.58■■□□□ 1.37
CTNS-209ENST00000574776 STAG3Q9UJ98 1225 aa23.58■■□□□ 1.37
CTNS-209ENST00000574776 EID1Q9Y6B2 187 aa23.57■■□□□ 1.36
CTNS-209ENST00000574776 SCAF11Q99590 1463 aaKnown RBP23.56■■□□□ 1.36
CTNS-209ENST00000574776 IDI1Q13907 227 aa23.56■■□□□ 1.36
CTNS-209ENST00000574776 ARHGAP23Q9P227 1491 aa23.55■■□□□ 1.36
CTNS-209ENST00000574776 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
CTNS-209ENST00000574776 SLIT1O75093 1534 aa23.54■■□□□ 1.36
CTNS-209ENST00000574776 LMTK2Q8IWU2 1503 aa23.53■■□□□ 1.36
CTNS-209ENST00000574776 PIK3C2BO00750 1634 aa23.52■■□□□ 1.36
CTNS-209ENST00000574776 ADGRL2O95490 1459 aa23.52■■□□□ 1.36
CTNS-209ENST00000574776 LRRC7Q96NW7 1537 aa23.52■■□□□ 1.36
CTNS-209ENST00000574776 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
CTNS-209ENST00000574776 SOCS7O14512 581 aa23.51■■□□□ 1.35
CTNS-209ENST00000574776 ANKRD50Q9ULJ7 1429 aa23.49■■□□□ 1.35
CTNS-209ENST00000574776 ALKQ9UM73 1620 aa23.47■■□□□ 1.35
CTNS-209ENST00000574776 NOS1P29475 1434 aa23.46■■□□□ 1.35
CTNS-209ENST00000574776 SYNMO15061 1565 aa23.45■■□□□ 1.34
CTNS-209ENST00000574776 EFCAB6Q5THR3 1501 aa23.45■■□□□ 1.34
CTNS-209ENST00000574776 SENP3Q9H4L4 574 aaPredicted RBP23.45■■□□□ 1.34
CTNS-209ENST00000574776 SLC52A1Q9NWF4 448 aa23.45■■□□□ 1.34
CTNS-209ENST00000574776 SLC26A8Q96RN1 970 aa23.43■■□□□ 1.34
CTNS-209ENST00000574776 PPARGC1BQ86YN6 1023 aaKnown RBP23.42■■□□□ 1.34
CTNS-209ENST00000574776 KDM5AP29375 1690 aaKnown RBP23.41■■□□□ 1.34
CTNS-209ENST00000574776 BCANQ96GW7 911 aa23.39■■□□□ 1.33
CTNS-209ENST00000574776 ITGAEP38570 1179 aa23.38■■□□□ 1.33
CTNS-209ENST00000574776 KCNA6P17658 529 aa23.37■■□□□ 1.33
CTNS-209ENST00000574776 RPRD2Q5VT52 1461 aaKnown RBP23.36■■□□□ 1.33
CTNS-209ENST00000574776 TET3O43151 1660 aa23.35■■□□□ 1.33
CTNS-209ENST00000574776 ADGRB3O60242 1522 aa23.35■■□□□ 1.33
CTNS-209ENST00000574776 XIRP1Q702N8 1843 aaKnown RBP23.35■■□□□ 1.33
CTNS-209ENST00000574776 PROSER2Q86WR7 435 aaPredicted RBP23.34■■□□□ 1.33
CTNS-209ENST00000574776 RBM33Q96EV2 1170 aaKnown RBP23.34■■□□□ 1.33
CTNS-209ENST00000574776 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
CTNS-209ENST00000574776 ROCK1Q13464 1354 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms