RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 KDM5DQ9BY66 1539 aa30.63■■■□□ 2.49
SCARF1-208ENST00000574545 DNMT1P26358 1616 aaKnown RBP30.62■■■□□ 2.49
SCARF1-208ENST00000574545 CROCC2H7BZ55 1655 aa30.62■■■□□ 2.49
SCARF1-208ENST00000574545 WASHC2CQ9Y4E1 1318 aa30.62■■■□□ 2.49
SCARF1-208ENST00000574545 RNF17Q9BXT8 1623 aaKnown RBP30.61■■■□□ 2.49
SCARF1-208ENST00000574545 DUOX2Q9NRD8 1548 aa30.6■■■□□ 2.49
SCARF1-208ENST00000574545 EIF2AK4Q9P2K8 1649 aaKnown RBP30.59■■■□□ 2.49
SCARF1-208ENST00000574545 KIF15Q9NS87 1388 aa30.58■■■□□ 2.49
SCARF1-208ENST00000574545 FBXO31Q5XUX0 539 aaPredicted RBP30.57■■■□□ 2.48
SCARF1-208ENST00000574545 PZPP20742 1482 aa30.57■■■□□ 2.48
SCARF1-208ENST00000574545 DMRT2Q9Y5R5 561 aa30.56■■■□□ 2.48
SCARF1-208ENST00000574545 RRP7BPQ9NSQ0 103 aa30.55■■■□□ 2.48
SCARF1-208ENST00000574545 NCOA1Q15788 1441 aa30.55■■■□□ 2.48
SCARF1-208ENST00000574545 MROH1Q8NDA8 1641 aa30.55■■■□□ 2.48
SCARF1-208ENST00000574545 MYO3AQ8NEV4 1616 aa30.55■■■□□ 2.48
SCARF1-208ENST00000574545 ZNF142P52746 1687 aaPredicted RBP30.52■■■□□ 2.48
SCARF1-208ENST00000574545 ERBINQ96RT1 1412 aa30.52■■■□□ 2.48
SCARF1-208ENST00000574545 ABCC3O15438 1527 aa30.52■■■□□ 2.48
SCARF1-208ENST00000574545 PTPRTO14522 1441 aa30.51■■■□□ 2.47
SCARF1-208ENST00000574545 CHIC2Q9UKJ5 165 aa30.51■■■□□ 2.47
SCARF1-208ENST00000574545 CAMSAP1Q5T5Y3 1602 aa30.51■■■□□ 2.47
SCARF1-208ENST00000574545 CEP170BQ9Y4F5 1589 aaPredicted RBP30.5■■■□□ 2.47
SCARF1-208ENST00000574545 FAM50AQ14320 339 aaKnown RBP30.48■■■□□ 2.47
SCARF1-208ENST00000574545 TNRQ92752 1358 aa30.48■■■□□ 2.47
SCARF1-208ENST00000574545 ANKRD30AQ9BXX3 1397 aa30.48■■■□□ 2.47
SCARF1-208ENST00000574545 A2ML1A8K2U0 1454 aa30.47■■■□□ 2.47
SCARF1-208ENST00000574545 ZC3H13Q5T200 1668 aaKnown RBP30.46■■■□□ 2.47
SCARF1-208ENST00000574545 ADGRL2O95490 1459 aa30.45■■■□□ 2.47
SCARF1-208ENST00000574545 PLA2R1Q13018 1463 aa30.44■■■□□ 2.46
SCARF1-208ENST00000574545 FBXO41Q8TF61 875 aa30.44■■■□□ 2.46
SCARF1-208ENST00000574545 PRDM15P57071 1507 aaPredicted RBP30.42■■■□□ 2.46
SCARF1-208ENST00000574545 NCKAP5LQ9HCH0 1330 aa30.41■■■□□ 2.46
SCARF1-208ENST00000574545 CERKQ8TCT0 537 aa30.39■■■□□ 2.46
SCARF1-208ENST00000574545 DEPDC5O75140 1603 aa30.39■■■□□ 2.46
SCARF1-208ENST00000574545 PKD2Q13563 968 aa30.38■■■□□ 2.45
SCARF1-208ENST00000574545 PPARGC1BQ86YN6 1023 aaKnown RBP30.38■■■□□ 2.45
SCARF1-208ENST00000574545 CEP152O94986 1710 aa30.38■■■□□ 2.45
SCARF1-208ENST00000574545 SPATA31D1Q6ZQQ2 1576 aa30.37■■■□□ 2.45
SCARF1-208ENST00000574545 NLRP1Q9C000 1473 aa30.37■■■□□ 2.45
SCARF1-208ENST00000574545 ARHGAP31Q2M1Z3 1444 aa30.36■■■□□ 2.45
SCARF1-208ENST00000574545 ERVK-7P63135 1459 aa30.35■■■□□ 2.45
SCARF1-208ENST00000574545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.33■■■□□ 2.45
SCARF1-208ENST00000574545 VWDEQ8N2E2 1590 aa30.32■■■□□ 2.44
SCARF1-208ENST00000574545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.3■■■□□ 2.44
SCARF1-208ENST00000574545 LMTK2Q8IWU2 1503 aa30.29■■■□□ 2.44
SCARF1-208ENST00000574545 ANKRD50Q9ULJ7 1429 aa30.29■■■□□ 2.44
SCARF1-208ENST00000574545 KANK1Q14678 1352 aa30.28■■■□□ 2.44
SCARF1-208ENST00000574545 THEMISQ8N1K5 641 aaPredicted RBP30.28■■■□□ 2.44
SCARF1-208ENST00000574545 LTBP4Q8N2S1 1624 aa30.28■■■□□ 2.44
SCARF1-208ENST00000574545 UGGT1Q9NYU2 1555 aa30.27■■■□□ 2.44
SCARF1-208ENST00000574545 CFAP65Q6ZU64 1925 aaKnown RBP30.26■■■□□ 2.44
SCARF1-208ENST00000574545 ROCK1Q13464 1354 aa30.25■■■□□ 2.43
SCARF1-208ENST00000574545 NEURL4Q96JN8 1562 aa30.2■■■□□ 2.43
SCARF1-208ENST00000574545 ANKLE2Q86XL3 938 aa30.2■■■□□ 2.43
SCARF1-208ENST00000574545 ZNF335Q9H4Z2 1342 aaPredicted RBP30.18■■■□□ 2.42
SCARF1-208ENST00000574545 POLR1AO95602 1720 aaPredicted RBP30.16■■■□□ 2.42
SCARF1-208ENST00000574545 RRBP1Q9P2E9 1410 aaKnown RBP30.16■■■□□ 2.42
SCARF1-208ENST00000574545 MED14O60244 1454 aa30.15■■■□□ 2.42
SCARF1-208ENST00000574545 EFCAB6Q5THR3 1501 aa30.14■■■□□ 2.42
SCARF1-208ENST00000574545 ITGAEP38570 1179 aa30.13■■■□□ 2.41
SCARF1-208ENST00000574545 UBR1Q8IWV7 1749 aa30.13■■■□□ 2.41
SCARF1-208ENST00000574545 NOS1P29475 1434 aa30.13■■■□□ 2.41
SCARF1-208ENST00000574545 UNC13BO14795 1591 aa30.1■■■□□ 2.41
SCARF1-208ENST00000574545 IDI1Q13907 227 aa30.09■■■□□ 2.41
SCARF1-208ENST00000574545 IQSEC2Q5JU85 1478 aa30.09■■■□□ 2.41
SCARF1-208ENST00000574545 NPHP4O75161 1426 aaPredicted RBP30.08■■■□□ 2.41
SCARF1-208ENST00000574545 SYNMO15061 1565 aa30.07■■■□□ 2.4
SCARF1-208ENST00000574545 ARHGAP23Q9P227 1491 aa30.07■■■□□ 2.4
SCARF1-208ENST00000574545 RPRD2Q5VT52 1461 aaKnown RBP30.06■■■□□ 2.4
SCARF1-208ENST00000574545 PIK3C2BO00750 1634 aa30.05■■■□□ 2.4
SCARF1-208ENST00000574545 SLIT1O75093 1534 aa30.05■■■□□ 2.4
SCARF1-208ENST00000574545 LTKP29376 864 aa30.04■■■□□ 2.4
SCARF1-208ENST00000574545 TET3O43151 1660 aa30.04■■■□□ 2.4
SCARF1-208ENST00000574545 SLC52A1Q9NWF4 448 aa30.01■■■□□ 2.39
SCARF1-208ENST00000574545 KDM5AP29375 1690 aaKnown RBP29.99■■■□□ 2.39
SCARF1-208ENST00000574545 TMEM2Q9UHN6 1383 aa29.99■■■□□ 2.39
SCARF1-208ENST00000574545 SCAF11Q99590 1463 aaKnown RBP29.99■■■□□ 2.39
SCARF1-208ENST00000574545 IQGAP1P46940 1657 aa29.98■■■□□ 2.39
SCARF1-208ENST00000574545 TXNDC2Q86VQ3 553 aa29.98■■■□□ 2.39
SCARF1-208ENST00000574545 IQGAP3Q86VI3 1631 aa29.97■■■□□ 2.39
SCARF1-208ENST00000574545 NUP155O75694 1391 aa29.97■■■□□ 2.39
SCARF1-208ENST00000574545 GCC2Q8IWJ2 1684 aa29.97■■■□□ 2.39
SCARF1-208ENST00000574545 STAG3Q9UJ98 1225 aa29.95■■■□□ 2.39
SCARF1-208ENST00000574545 CPS1P31327 1500 aa29.92■■■□□ 2.38
SCARF1-208ENST00000574545 E9PCH4 1651 aa29.92■■■□□ 2.38
SCARF1-208ENST00000574545 NAIPQ13075 1403 aa29.92■■■□□ 2.38
SCARF1-208ENST00000574545 EID1Q9Y6B2 187 aa29.91■■■□□ 2.38
SCARF1-208ENST00000574545 ADGRB3O60242 1522 aa29.91■■■□□ 2.38
SCARF1-208ENST00000574545 STRCP1A6NGW2 1772 aa29.84■■■□□ 2.37
SCARF1-208ENST00000574545 HFM1A2PYH4 1435 aa29.82■■■□□ 2.36
SCARF1-208ENST00000574545 UBAP1LF5GYI3 381 aa29.82■■■□□ 2.36
SCARF1-208ENST00000574545 TMEM131LA2VDJ0 1609 aa29.82■■■□□ 2.36
SCARF1-208ENST00000574545 ZFYVE9O95405 1425 aa29.8■■■□□ 2.36
SCARF1-208ENST00000574545 LRRC7Q96NW7 1537 aa29.77■■■□□ 2.36
SCARF1-208ENST00000574545 MYO5BQ9ULV0 1848 aa29.77■■■□□ 2.36
SCARF1-208ENST00000574545 RIMS2Q9UQ26 1411 aa29.74■■■□□ 2.35
SCARF1-208ENST00000574545 SLC26A8Q96RN1 970 aa29.72■■■□□ 2.35
SCARF1-208ENST00000574545 PLEKHG1Q9ULL1 1385 aa29.7■■■□□ 2.35
SCARF1-208ENST00000574545 CHGAP10645 457 aaKnown RBP29.7■■■□□ 2.35
SCARF1-208ENST00000574545 HDGFP51858 240 aaKnown RBP29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms