RNA–Protein interactions for RNA: ENST00000574132.5

RAB40B-209, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-209ENST00000574132 IQSEC2Q5JU85 1478 aa24.14■■□□□ 1.46
RAB40B-209ENST00000574132 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
RAB40B-209ENST00000574132 FBXO31Q5XUX0 539 aaPredicted RBP24.13■■□□□ 1.45
RAB40B-209ENST00000574132 TNRQ92752 1358 aa24.13■■□□□ 1.45
RAB40B-209ENST00000574132 A2ML1A8K2U0 1454 aa24.13■■□□□ 1.45
RAB40B-209ENST00000574132 KDM5DQ9BY66 1539 aa24.11■■□□□ 1.45
RAB40B-209ENST00000574132 TCOF1Q13428 1488 aaKnown RBP24.11■■□□□ 1.45
RAB40B-209ENST00000574132 UBAP1LF5GYI3 381 aa24.1■■□□□ 1.45
RAB40B-209ENST00000574132 LRRC9Q6ZRR7 1453 aa24.1■■□□□ 1.45
RAB40B-209ENST00000574132 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.45
RAB40B-209ENST00000574132 PZPP20742 1482 aa24.07■■□□□ 1.44
RAB40B-209ENST00000574132 DNMT1P26358 1616 aaKnown RBP24.06■■□□□ 1.44
RAB40B-209ENST00000574132 FAM135AQ9P2D6 1515 aa24.05■■□□□ 1.44
RAB40B-209ENST00000574132 KANK4Q5T7N3 995 aaPredicted RBP24.04■■□□□ 1.44
RAB40B-209ENST00000574132 ANKLE2Q86XL3 938 aa24.02■■□□□ 1.44
RAB40B-209ENST00000574132 THEMISQ8N1K5 641 aaPredicted RBP24.02■■□□□ 1.44
RAB40B-209ENST00000574132 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
RAB40B-209ENST00000574132 APLP2Q06481 763 aa24■■□□□ 1.43
RAB40B-209ENST00000574132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24■■□□□ 1.43
RAB40B-209ENST00000574132 ILDR2Q71H61 639 aa23.98■■□□□ 1.43
RAB40B-209ENST00000574132 SCAF1Q9H7N4 1312 aaKnown RBP23.98■■□□□ 1.43
RAB40B-209ENST00000574132 NLRP1Q9C000 1473 aa23.98■■□□□ 1.43
RAB40B-209ENST00000574132 MYOM3Q5VTT5 1437 aa23.97■■□□□ 1.43
RAB40B-209ENST00000574132 SPATA31D1Q6ZQQ2 1576 aa23.97■■□□□ 1.43
RAB40B-209ENST00000574132 POLR1AO95602 1720 aaPredicted RBP23.96■■□□□ 1.43
RAB40B-209ENST00000574132 MAP3K1Q13233 1512 aa23.96■■□□□ 1.43
RAB40B-209ENST00000574132 UGGT1Q9NYU2 1555 aa23.95■■□□□ 1.43
RAB40B-209ENST00000574132 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.43
RAB40B-209ENST00000574132 NEURL4Q96JN8 1562 aa23.92■■□□□ 1.42
RAB40B-209ENST00000574132 PIP4K2BP78356 416 aa23.92■■□□□ 1.42
RAB40B-209ENST00000574132 ABCC3O15438 1527 aa23.92■■□□□ 1.42
RAB40B-209ENST00000574132 RNF17Q9BXT8 1623 aaKnown RBP23.92■■□□□ 1.42
RAB40B-209ENST00000574132 SHANK2Q9UPX8 1470 aa23.91■■□□□ 1.42
RAB40B-209ENST00000574132 TOM1O60784 492 aa23.9■■□□□ 1.42
RAB40B-209ENST00000574132 NPHP4O75161 1426 aaPredicted RBP23.9■■□□□ 1.42
RAB40B-209ENST00000574132 CPS1P31327 1500 aa23.89■■□□□ 1.42
RAB40B-209ENST00000574132 ZC3H13Q5T200 1668 aaKnown RBP23.89■■□□□ 1.42
RAB40B-209ENST00000574132 EIF2AK4Q9P2K8 1649 aaKnown RBP23.89■■□□□ 1.42
RAB40B-209ENST00000574132 SOCS7O14512 581 aa23.87■■□□□ 1.41
RAB40B-209ENST00000574132 RRP7BPQ9NSQ0 103 aa23.87■■□□□ 1.41
RAB40B-209ENST00000574132 DUOX2Q9NRD8 1548 aa23.87■■□□□ 1.41
RAB40B-209ENST00000574132 KIF15Q9NS87 1388 aa23.86■■□□□ 1.41
RAB40B-209ENST00000574132 ERVK-7P63135 1459 aa23.86■■□□□ 1.41
RAB40B-209ENST00000574132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.85■■□□□ 1.41
RAB40B-209ENST00000574132 CFAP65Q6ZU64 1925 aaKnown RBP23.84■■□□□ 1.41
RAB40B-209ENST00000574132 CEP152O94986 1710 aa23.83■■□□□ 1.41
RAB40B-209ENST00000574132 MED14O60244 1454 aa23.82■■□□□ 1.4
RAB40B-209ENST00000574132 DEPDC5O75140 1603 aa23.82■■□□□ 1.4
RAB40B-209ENST00000574132 MROH1Q8NDA8 1641 aa23.81■■□□□ 1.4
RAB40B-209ENST00000574132 ABCC5O15440 1437 aa23.81■■□□□ 1.4
RAB40B-209ENST00000574132 PTPN23Q9H3S7 1636 aa23.81■■□□□ 1.4
RAB40B-209ENST00000574132 HSPA1LP34931 641 aa23.8■■□□□ 1.4
RAB40B-209ENST00000574132 VWDEQ8N2E2 1590 aa23.8■■□□□ 1.4
RAB40B-209ENST00000574132 IQGAP1P46940 1657 aa23.79■■□□□ 1.4
RAB40B-209ENST00000574132 ERBINQ96RT1 1412 aa23.79■■□□□ 1.4
RAB40B-209ENST00000574132 KANK1Q14678 1352 aa23.78■■□□□ 1.4
RAB40B-209ENST00000574132 CHIC2Q9UKJ5 165 aa23.78■■□□□ 1.4
RAB40B-209ENST00000574132 DAPK1P53355 1430 aa23.77■■□□□ 1.4
RAB40B-209ENST00000574132 STAG3Q9UJ98 1225 aa23.77■■□□□ 1.4
RAB40B-209ENST00000574132 TXNDC2Q86VQ3 553 aa23.75■■□□□ 1.39
RAB40B-209ENST00000574132 CROCC2H7BZ55 1655 aa23.75■■□□□ 1.39
RAB40B-209ENST00000574132 FGD6Q6ZV73 1430 aa23.75■■□□□ 1.39
RAB40B-209ENST00000574132 EID1Q9Y6B2 187 aa23.74■■□□□ 1.39
RAB40B-209ENST00000574132 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
RAB40B-209ENST00000574132 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
RAB40B-209ENST00000574132 ANKRD30AQ9BXX3 1397 aa23.73■■□□□ 1.39
RAB40B-209ENST00000574132 SCAF11Q99590 1463 aaKnown RBP23.73■■□□□ 1.39
RAB40B-209ENST00000574132 ARHGAP31Q2M1Z3 1444 aa23.72■■□□□ 1.39
RAB40B-209ENST00000574132 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
RAB40B-209ENST00000574132 LTKP29376 864 aa23.7■■□□□ 1.38
RAB40B-209ENST00000574132 FAM50AQ14320 339 aaKnown RBP23.68■■□□□ 1.38
RAB40B-209ENST00000574132 LRRC7Q96NW7 1537 aa23.67■■□□□ 1.38
RAB40B-209ENST00000574132 STRCP1A6NGW2 1772 aa23.65■■□□□ 1.38
RAB40B-209ENST00000574132 SLIT1O75093 1534 aa23.64■■□□□ 1.38
RAB40B-209ENST00000574132 ARHGAP23Q9P227 1491 aa23.64■■□□□ 1.38
RAB40B-209ENST00000574132 SYNMO15061 1565 aa23.64■■□□□ 1.37
RAB40B-209ENST00000574132 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
RAB40B-209ENST00000574132 PIK3C2BO00750 1634 aa23.62■■□□□ 1.37
RAB40B-209ENST00000574132 MED1Q15648 1581 aaPredicted RBP23.62■■□□□ 1.37
RAB40B-209ENST00000574132 TMEM2Q9UHN6 1383 aa23.62■■□□□ 1.37
RAB40B-209ENST00000574132 IDI1Q13907 227 aa23.61■■□□□ 1.37
RAB40B-209ENST00000574132 BCANQ96GW7 911 aa23.59■■□□□ 1.37
RAB40B-209ENST00000574132 ALKQ9UM73 1620 aa23.59■■□□□ 1.37
RAB40B-209ENST00000574132 EFCAB6Q5THR3 1501 aa23.58■■□□□ 1.36
RAB40B-209ENST00000574132 LMTK2Q8IWU2 1503 aa23.58■■□□□ 1.36
RAB40B-209ENST00000574132 SLC26A8Q96RN1 970 aa23.54■■□□□ 1.36
RAB40B-209ENST00000574132 ANKRD50Q9ULJ7 1429 aa23.53■■□□□ 1.36
RAB40B-209ENST00000574132 SLC52A1Q9NWF4 448 aa23.53■■□□□ 1.36
RAB40B-209ENST00000574132 ADGRL2O95490 1459 aa23.53■■□□□ 1.36
RAB40B-209ENST00000574132 NOS1P29475 1434 aa23.51■■□□□ 1.35
RAB40B-209ENST00000574132 KCNA6P17658 529 aa23.51■■□□□ 1.35
RAB40B-209ENST00000574132 KDM5AP29375 1690 aaKnown RBP23.5■■□□□ 1.35
RAB40B-209ENST00000574132 PROSER2Q86WR7 435 aaPredicted RBP23.49■■□□□ 1.35
RAB40B-209ENST00000574132 ADGRB3O60242 1522 aa23.49■■□□□ 1.35
RAB40B-209ENST00000574132 PPP1R15AO75807 674 aaPredicted RBP23.48■■□□□ 1.35
RAB40B-209ENST00000574132 TMEM94Q12767 1356 aa23.48■■□□□ 1.35
RAB40B-209ENST00000574132 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
RAB40B-209ENST00000574132 CHGAP10645 457 aaKnown RBP23.46■■□□□ 1.35
RAB40B-209ENST00000574132 RPRD2Q5VT52 1461 aaKnown RBP23.45■■□□□ 1.34
RAB40B-209ENST00000574132 HDGFP51858 240 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms