RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 CNTLNQ9NXG0 1405 aa23.66■■□□□ 1.38
CCNE1-204ENST00000574121 ESF1Q9H501 851 aaKnown RBP23.64■■□□□ 1.37
CCNE1-204ENST00000574121 MADDQ8WXG6 1647 aa23.62■■□□□ 1.37
CCNE1-204ENST00000574121 GCC2Q8IWJ2 1684 aa23.62■■□□□ 1.37
CCNE1-204ENST00000574121 PRDM15P57071 1507 aaPredicted RBP23.62■■□□□ 1.37
CCNE1-204ENST00000574121 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
CCNE1-204ENST00000574121 KDM5DQ9BY66 1539 aa23.59■■□□□ 1.37
CCNE1-204ENST00000574121 MROH1Q8NDA8 1641 aa23.59■■□□□ 1.37
CCNE1-204ENST00000574121 KANK1Q14678 1352 aa23.59■■□□□ 1.37
CCNE1-204ENST00000574121 FER1L4A9Z1Z3 1794 aa23.59■■□□□ 1.37
CCNE1-204ENST00000574121 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.37
CCNE1-204ENST00000574121 WASHC2CQ9Y4E1 1318 aa23.58■■□□□ 1.36
CCNE1-204ENST00000574121 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
CCNE1-204ENST00000574121 PTPRMP28827 1452 aa23.56■■□□□ 1.36
CCNE1-204ENST00000574121 ZC3H13Q5T200 1668 aaKnown RBP23.54■■□□□ 1.36
CCNE1-204ENST00000574121 RIMS1Q86UR5 1692 aaKnown RBP23.54■■□□□ 1.36
CCNE1-204ENST00000574121 UNC13BO14795 1591 aa23.54■■□□□ 1.36
CCNE1-204ENST00000574121 VWDEQ8N2E2 1590 aa23.54■■□□□ 1.36
CCNE1-204ENST00000574121 MROH2AA6NES4 1674 aa23.54■■□□□ 1.36
CCNE1-204ENST00000574121 ABCC3O15438 1527 aa23.54■■□□□ 1.36
CCNE1-204ENST00000574121 SETD5Q9C0A6 1442 aa23.53■■□□□ 1.36
CCNE1-204ENST00000574121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.53■■□□□ 1.36
CCNE1-204ENST00000574121 ZMYM3Q14202 1370 aa23.52■■□□□ 1.36
CCNE1-204ENST00000574121 LMTK2Q8IWU2 1503 aa23.51■■□□□ 1.35
CCNE1-204ENST00000574121 CLTCQ00610 1675 aaKnown RBP23.5■■□□□ 1.35
CCNE1-204ENST00000574121 NUP155O75694 1391 aa23.48■■□□□ 1.35
CCNE1-204ENST00000574121 ARHGAP31Q2M1Z3 1444 aa23.47■■□□□ 1.35
CCNE1-204ENST00000574121 HRCP23327 699 aa23.46■■□□□ 1.35
CCNE1-204ENST00000574121 PZPP20742 1482 aa23.45■■□□□ 1.34
CCNE1-204ENST00000574121 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
CCNE1-204ENST00000574121 NPATQ14207 1427 aa23.44■■□□□ 1.34
CCNE1-204ENST00000574121 RAB3GAP2Q9H2M9 1393 aa23.44■■□□□ 1.34
CCNE1-204ENST00000574121 CEBPAP49715 358 aaPredicted RBP23.43■■□□□ 1.34
CCNE1-204ENST00000574121 C3P01024 1663 aa23.43■■□□□ 1.34
CCNE1-204ENST00000574121 CEP152O94986 1710 aa23.42■■□□□ 1.34
CCNE1-204ENST00000574121 CAMSAP1Q5T5Y3 1602 aa23.42■■□□□ 1.34
CCNE1-204ENST00000574121 EFCAB6Q5THR3 1501 aa23.41■■□□□ 1.34
CCNE1-204ENST00000574121 RPRD2Q5VT52 1461 aaKnown RBP23.41■■□□□ 1.34
CCNE1-204ENST00000574121 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
CCNE1-204ENST00000574121 TRIM52Q96A61 297 aa23.4■■□□□ 1.34
CCNE1-204ENST00000574121 TET3O43151 1660 aa23.4■■□□□ 1.34
CCNE1-204ENST00000574121 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
CCNE1-204ENST00000574121 ERVK-7P63135 1459 aa23.34■■□□□ 1.33
CCNE1-204ENST00000574121 SPATA31D1Q6ZQQ2 1576 aa23.34■■□□□ 1.33
CCNE1-204ENST00000574121 FBXO31Q5XUX0 539 aaPredicted RBP23.33■■□□□ 1.33
CCNE1-204ENST00000574121 TNRQ92752 1358 aa23.32■■□□□ 1.32
CCNE1-204ENST00000574121 SLC4A1APQ9BWU0 796 aaKnown RBP23.32■■□□□ 1.32
CCNE1-204ENST00000574121 SETD1BQ9UPS6 1966 aaKnown RBP23.31■■□□□ 1.32
CCNE1-204ENST00000574121 NOS1P29475 1434 aa23.3■■□□□ 1.32
CCNE1-204ENST00000574121 UHRF1BP1Q6BDS2 1440 aa23.28■■□□□ 1.32
CCNE1-204ENST00000574121 MPHOSPH9Q99550 1183 aa23.28■■□□□ 1.32
CCNE1-204ENST00000574121 E9PCH4 1651 aa23.28■■□□□ 1.32
CCNE1-204ENST00000574121 PREX1Q8TCU6 1659 aa23.28■■□□□ 1.32
CCNE1-204ENST00000574121 PKD2Q13563 968 aa23.27■■□□□ 1.32
CCNE1-204ENST00000574121 NLRP1Q9C000 1473 aa23.27■■□□□ 1.32
CCNE1-204ENST00000574121 PTPRTO14522 1441 aa23.24■■□□□ 1.31
CCNE1-204ENST00000574121 SLC52A1Q9NWF4 448 aa23.23■■□□□ 1.31
CCNE1-204ENST00000574121 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
CCNE1-204ENST00000574121 LMTK3Q96Q04 1460 aa23.22■■□□□ 1.31
CCNE1-204ENST00000574121 MYO3AQ8NEV4 1616 aa23.22■■□□□ 1.31
CCNE1-204ENST00000574121 A2ML1A8K2U0 1454 aa23.21■■□□□ 1.31
CCNE1-204ENST00000574121 SYNMO15061 1565 aa23.2■■□□□ 1.3
CCNE1-204ENST00000574121 ZNF142P52746 1687 aaPredicted RBP23.19■■□□□ 1.3
CCNE1-204ENST00000574121 CEP170BQ9Y4F5 1589 aaPredicted RBP23.18■■□□□ 1.3
CCNE1-204ENST00000574121 TRPM2O94759 1503 aa23.16■■□□□ 1.3
CCNE1-204ENST00000574121 CFAP65Q6ZU64 1925 aaKnown RBP23.16■■□□□ 1.3
CCNE1-204ENST00000574121 IDI1Q13907 227 aa23.15■■□□□ 1.3
CCNE1-204ENST00000574121 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
CCNE1-204ENST00000574121 PLA2R1Q13018 1463 aa23.14■■□□□ 1.29
CCNE1-204ENST00000574121 PIK3C2BO00750 1634 aa23.14■■□□□ 1.29
CCNE1-204ENST00000574121 UGGT1Q9NYU2 1555 aa23.13■■□□□ 1.29
CCNE1-204ENST00000574121 FOXD1Q16676 465 aa23.12■■□□□ 1.29
CCNE1-204ENST00000574121 THEMISQ8N1K5 641 aaPredicted RBP23.12■■□□□ 1.29
CCNE1-204ENST00000574121 KDM5AP29375 1690 aaKnown RBP23.11■■□□□ 1.29
CCNE1-204ENST00000574121 STAG3Q9UJ98 1225 aa23.08■■□□□ 1.29
CCNE1-204ENST00000574121 ADGRB3O60242 1522 aa23.08■■□□□ 1.28
CCNE1-204ENST00000574121 CCDC144AA2RUR9 1427 aa23.08■■□□□ 1.28
CCNE1-204ENST00000574121 ANKRD30BQ9BXX2 1392 aa23.07■■□□□ 1.28
CCNE1-204ENST00000574121 HSPA2P54652 639 aa23.06■■□□□ 1.28
CCNE1-204ENST00000574121 UBR1Q8IWV7 1749 aa23.05■■□□□ 1.28
CCNE1-204ENST00000574121 CLTCL1P53675 1640 aa23.04■■□□□ 1.28
CCNE1-204ENST00000574121 DHX57Q6P158 1386 aaKnown RBP23.04■■□□□ 1.28
CCNE1-204ENST00000574121 TMEM131LA2VDJ0 1609 aa23.02■■□□□ 1.28
CCNE1-204ENST00000574121 SLIT1O75093 1534 aa23.02■■□□□ 1.28
CCNE1-204ENST00000574121 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
CCNE1-204ENST00000574121 ARHGAP23Q9P227 1491 aa23.01■■□□□ 1.27
CCNE1-204ENST00000574121 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
CCNE1-204ENST00000574121 NEURL4Q96JN8 1562 aa22.98■■□□□ 1.27
CCNE1-204ENST00000574121 HDGFP51858 240 aaKnown RBP22.98■■□□□ 1.27
CCNE1-204ENST00000574121 ANKLE2Q86XL3 938 aa22.98■■□□□ 1.27
CCNE1-204ENST00000574121 EID1Q9Y6B2 187 aa22.96■■□□□ 1.27
CCNE1-204ENST00000574121 KIF1BO60333 1816 aa22.94■■□□□ 1.26
CCNE1-204ENST00000574121 ZFYVE9O95405 1425 aa22.94■■□□□ 1.26
CCNE1-204ENST00000574121 SPATA31E1Q6ZUB1 1445 aa22.94■■□□□ 1.26
CCNE1-204ENST00000574121 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.94■■□□□ 1.26
CCNE1-204ENST00000574121 SCAF11Q99590 1463 aaKnown RBP22.93■■□□□ 1.26
CCNE1-204ENST00000574121 RPGRIP1LQ68CZ1 1315 aa22.93■■□□□ 1.26
CCNE1-204ENST00000574121 DMRT2Q9Y5R5 561 aa22.93■■□□□ 1.26
CCNE1-204ENST00000574121 RIMS2Q9UQ26 1411 aa22.92■■□□□ 1.26
CCNE1-204ENST00000574121 TXNDC2Q86VQ3 553 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms