RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-215	ENST00000574095	DMRT2	Q9Y5R5	561 aa		40.51	■■■■■ 4.08
NPLOC4-215	ENST00000574095	MYO3A	Q8NEV4	1616 aa		40.5	■■■■■ 4.07
NPLOC4-215	ENST00000574095	DAPK1	P53355	1430 aa		40.49	■■■■■ 4.07
NPLOC4-215	ENST00000574095	FAM135A	Q9P2D6	1515 aa		40.48	■■■■■ 4.07
NPLOC4-215	ENST00000574095	SHANK2	Q9UPX8	1470 aa		40.47	■■■■■ 4.07
NPLOC4-215	ENST00000574095	DNMT1	P26358	1616 aa	Known RBP	40.47	■■■■■ 4.07
NPLOC4-215	ENST00000574095	RNF17	Q9BXT8	1623 aa	Known RBP	40.46	■■■■■ 4.07
NPLOC4-215	ENST00000574095	FBXO31	Q5XUX0	539 aa	Predicted RBP	40.46	■■■■■ 4.07
NPLOC4-215	ENST00000574095	EIF2AK4	Q9P2K8	1649 aa	Known RBP	40.45	■■■■■ 4.07
NPLOC4-215	ENST00000574095	DUOX2	Q9NRD8	1548 aa		40.45	■■■■■ 4.07
NPLOC4-215	ENST00000574095	CAMSAP1	Q5T5Y3	1602 aa		40.45	■■■■■ 4.07
NPLOC4-215	ENST00000574095	RRP7BP	Q9NSQ0	103 aa		40.44	■■■■■ 4.06
NPLOC4-215	ENST00000574095	ZNF142	P52746	1687 aa	Predicted RBP	40.43	■■■■■ 4.06
NPLOC4-215	ENST00000574095	NCOA1	Q15788	1441 aa		40.42	■■■■■ 4.06
NPLOC4-215	ENST00000574095	KIF15	Q9NS87	1388 aa		40.42	■■■■■ 4.06
NPLOC4-215	ENST00000574095	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	40.42	■■■■■ 4.06
NPLOC4-215	ENST00000574095	PZP	P20742	1482 aa		40.41	■■■■■ 4.06
NPLOC4-215	ENST00000574095	FBXO41	Q8TF61	875 aa		40.41	■■■■■ 4.06
NPLOC4-215	ENST00000574095	CHIC2	Q9UKJ5	165 aa		40.39	■■■■■ 4.06
NPLOC4-215	ENST00000574095	PTPRT	O14522	1441 aa		40.37	■■■■■ 4.05
NPLOC4-215	ENST00000574095	FAM50A	Q14320	339 aa	Known RBP	40.36	■■■■■ 4.05
NPLOC4-215	ENST00000574095	TNR	Q92752	1358 aa		40.35	■■■■■ 4.05
NPLOC4-215	ENST00000574095	MROH1	Q8NDA8	1641 aa		40.35	■■■■■ 4.05
NPLOC4-215	ENST00000574095	ABCC3	O15438	1527 aa		40.35	■■■■■ 4.05
NPLOC4-215	ENST00000574095	CERK	Q8TCT0	537 aa		40.34	■■■■■ 4.05
NPLOC4-215	ENST00000574095	NCKAP5L	Q9HCH0	1330 aa		40.33	■■■■■ 4.05
NPLOC4-215	ENST00000574095	ZC3H13	Q5T200	1668 aa	Known RBP	40.32	■■■■■ 4.05
NPLOC4-215	ENST00000574095	A2ML1	A8K2U0	1454 aa		40.32	■■■■■ 4.04
NPLOC4-215	ENST00000574095	ERBIN	Q96RT1	1412 aa		40.3	■■■■■ 4.04
NPLOC4-215	ENST00000574095	ANKRD30A	Q9BXX3	1397 aa		40.29	■■■■■ 4.04
NPLOC4-215	ENST00000574095	CEP152	O94986	1710 aa		40.28	■■■■■ 4.04
NPLOC4-215	ENST00000574095	PLA2R1	Q13018	1463 aa		40.26	■■■■■ 4.03
NPLOC4-215	ENST00000574095	PPARGC1B	Q86YN6	1023 aa	Known RBP	40.24	■■■■■ 4.03
NPLOC4-215	ENST00000574095	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	40.22	■■■■■ 4.03
NPLOC4-215	ENST00000574095	PKD2	Q13563	968 aa		40.21	■■■■■ 4.03
NPLOC4-215	ENST00000574095	CFAP65	Q6ZU64	1925 aa	Known RBP	40.2	■■■■■ 4.03
NPLOC4-215	ENST00000574095	PRDM15	P57071	1507 aa	Predicted RBP	40.19	■■■■■ 4.02
NPLOC4-215	ENST00000574095	ADGRL2	O95490	1459 aa		40.16	■■■■■ 4.02
NPLOC4-215	ENST00000574095	DEPDC5	O75140	1603 aa		40.16	■■■■■ 4.02
NPLOC4-215	ENST00000574095	SPATA31D1	Q6ZQQ2	1576 aa		40.15	■■■■■ 4.02
NPLOC4-215	ENST00000574095	NLRP1	Q9C000	1473 aa		40.15	■■■■■ 4.02
NPLOC4-215	ENST00000574095	ERVK-7	P63135	1459 aa		40.13	■■■■■ 4.02
NPLOC4-215	ENST00000574095	KANK1	Q14678	1352 aa		40.1	■■■■■ 4.01
NPLOC4-215	ENST00000574095	UGGT1	Q9NYU2	1555 aa		40.09	■■■■■ 4.01
NPLOC4-215	ENST00000574095	LTBP4	Q8N2S1	1624 aa		40.09	■■■■■ 4.01
NPLOC4-215	ENST00000574095	THEMIS	Q8N1K5	641 aa	Predicted RBP	40.08	■■■■■ 4.01
NPLOC4-215	ENST00000574095	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	40.08	■■■■■ 4.01
NPLOC4-215	ENST00000574095	ARHGAP31	Q2M1Z3	1444 aa		40.05	■■■■■ 4
NPLOC4-215	ENST00000574095	POLR1A	O95602	1720 aa	Predicted RBP	40.04	■■■■■ 4
NPLOC4-215	ENST00000574095	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	40.01	■■■■■ 4
NPLOC4-215	ENST00000574095	ANKRD50	Q9ULJ7	1429 aa		40	■■■■□ 3.99
NPLOC4-215	ENST00000574095	ANKLE2	Q86XL3	938 aa		40	■■■■□ 3.99
NPLOC4-215	ENST00000574095	VWDE	Q8N2E2	1590 aa		39.99	■■■■□ 3.99
NPLOC4-215	ENST00000574095	NEURL4	Q96JN8	1562 aa		39.98	■■■■□ 3.99
NPLOC4-215	ENST00000574095	LMTK2	Q8IWU2	1503 aa		39.96	■■■■□ 3.99
NPLOC4-215	ENST00000574095	ITGAE	P38570	1179 aa		39.95	■■■■□ 3.99
NPLOC4-215	ENST00000574095	UBR1	Q8IWV7	1749 aa		39.91	■■■■□ 3.98
NPLOC4-215	ENST00000574095	ROCK1	Q13464	1354 aa		39.87	■■■■□ 3.97
NPLOC4-215	ENST00000574095	EFCAB6	Q5THR3	1501 aa		39.85	■■■■□ 3.97
NPLOC4-215	ENST00000574095	NPHP4	O75161	1426 aa	Predicted RBP	39.84	■■■■□ 3.97
NPLOC4-215	ENST00000574095	MED14	O60244	1454 aa		39.83	■■■■□ 3.97
NPLOC4-215	ENST00000574095	IQSEC2	Q5JU85	1478 aa		39.82	■■■■□ 3.97
NPLOC4-215	ENST00000574095	PIK3C2B	O00750	1634 aa		39.81	■■■■□ 3.96
NPLOC4-215	ENST00000574095	IDI1	Q13907	227 aa		39.77	■■■■□ 3.96
NPLOC4-215	ENST00000574095	IQGAP1	P46940	1657 aa		39.76	■■■■□ 3.96
NPLOC4-215	ENST00000574095	UNC13B	O14795	1591 aa		39.76	■■■■□ 3.96
NPLOC4-215	ENST00000574095	SYNM	O15061	1565 aa		39.76	■■■■□ 3.96
NPLOC4-215	ENST00000574095	NOS1	P29475	1434 aa		39.75	■■■■□ 3.95
NPLOC4-215	ENST00000574095	STAG3	Q9UJ98	1225 aa		39.75	■■■■□ 3.95
NPLOC4-215	ENST00000574095	TET3	O43151	1660 aa		39.73	■■■■□ 3.95
NPLOC4-215	ENST00000574095	LTK	P29376	864 aa		39.72	■■■■□ 3.95
NPLOC4-215	ENST00000574095	TXNDC2	Q86VQ3	553 aa		39.72	■■■■□ 3.95
NPLOC4-215	ENST00000574095	ARHGAP23	Q9P227	1491 aa		39.72	■■■■□ 3.95
NPLOC4-215	ENST00000574095	RRBP1	Q9P2E9	1410 aa	Known RBP	39.72	■■■■□ 3.95
NPLOC4-215	ENST00000574095	SLIT1	O75093	1534 aa		39.71	■■■■□ 3.95
NPLOC4-215	ENST00000574095	SCAF11	Q99590	1463 aa	Known RBP	39.69	■■■■□ 3.94
NPLOC4-215	ENST00000574095	RPRD2	Q5VT52	1461 aa	Known RBP	39.68	■■■■□ 3.94
NPLOC4-215	ENST00000574095	GCC2	Q8IWJ2	1684 aa		39.67	■■■■□ 3.94
NPLOC4-215	ENST00000574095	SLC52A1	Q9NWF4	448 aa		39.65	■■■■□ 3.94
NPLOC4-215	ENST00000574095	EID1	Q9Y6B2	187 aa		39.65	■■■■□ 3.94
NPLOC4-215	ENST00000574095	CPS1	P31327	1500 aa		39.65	■■■■□ 3.94
NPLOC4-215	ENST00000574095	KDM5A	P29375	1690 aa	Known RBP	39.64	■■■■□ 3.94
NPLOC4-215	ENST00000574095	TMEM2	Q9UHN6	1383 aa		39.64	■■■■□ 3.94
NPLOC4-215	ENST00000574095	UBAP1L	F5GYI3	381 aa		39.62	■■■■□ 3.93
NPLOC4-215	ENST00000574095	IQGAP3	Q86VI3	1631 aa		39.62	■■■■□ 3.93
NPLOC4-215	ENST00000574095	NUP155	O75694	1391 aa		39.61	■■■■□ 3.93
NPLOC4-215	ENST00000574095		E9PCH4	1651 aa		39.59	■■■■□ 3.93
NPLOC4-215	ENST00000574095	ADGRB3	O60242	1522 aa		39.58	■■■■□ 3.93
NPLOC4-215	ENST00000574095	STRCP1	A6NGW2	1772 aa		39.56	■■■■□ 3.92
NPLOC4-215	ENST00000574095	MYO5B	Q9ULV0	1848 aa		39.49	■■■■□ 3.91
NPLOC4-215	ENST00000574095	NAIP	Q13075	1403 aa		39.45	■■■■□ 3.91
NPLOC4-215	ENST00000574095	CHGA	P10645	457 aa	Known RBP	39.43	■■■■□ 3.9
NPLOC4-215	ENST00000574095	TMEM131L	A2VDJ0	1609 aa		39.43	■■■■□ 3.9
NPLOC4-215	ENST00000574095	LRRC7	Q96NW7	1537 aa		39.41	■■■■□ 3.9
NPLOC4-215	ENST00000574095	TOM1	O60784	492 aa		39.39	■■■■□ 3.9
NPLOC4-215	ENST00000574095	SLC26A8	Q96RN1	970 aa		39.39	■■■■□ 3.9
NPLOC4-215	ENST00000574095	SENP3	Q9H4L4	574 aa	Predicted RBP	39.37	■■■■□ 3.89
NPLOC4-215	ENST00000574095	PIP4K2B	P78356	416 aa		39.36	■■■■□ 3.89
NPLOC4-215	ENST00000574095	BCAN	Q96GW7	911 aa		39.36	■■■■□ 3.89
NPLOC4-215	ENST00000574095	SCAF1	Q9H7N4	1312 aa	Known RBP	39.36	■■■■□ 3.89

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