RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CEP170BQ9Y4F5 1589 aaPredicted RBP33.2■■■□□ 2.91
CHRNB1-206ENST00000574054 WASHC2CQ9Y4E1 1318 aa33.2■■■□□ 2.91
CHRNB1-206ENST00000574054 NCKAP5LQ9HCH0 1330 aa33.19■■■□□ 2.9
CHRNB1-206ENST00000574054 ZNF142P52746 1687 aaPredicted RBP33.19■■■□□ 2.9
CHRNB1-206ENST00000574054 FAM135AQ9P2D6 1515 aa33.16■■■□□ 2.9
CHRNB1-206ENST00000574054 MAST1Q9Y2H9 1570 aa33.16■■■□□ 2.9
CHRNB1-206ENST00000574054 FBXO31Q5XUX0 539 aaPredicted RBP33.14■■■□□ 2.9
CHRNB1-206ENST00000574054 TNRQ92752 1358 aa33.13■■■□□ 2.89
CHRNB1-206ENST00000574054 PZPP20742 1482 aa33.12■■■□□ 2.89
CHRNB1-206ENST00000574054 PLA2R1Q13018 1463 aa33.12■■■□□ 2.89
CHRNB1-206ENST00000574054 A2ML1A8K2U0 1454 aa33.11■■■□□ 2.89
CHRNB1-206ENST00000574054 PKD2Q13563 968 aa33.09■■■□□ 2.89
CHRNB1-206ENST00000574054 RNF17Q9BXT8 1623 aaKnown RBP33.05■■■□□ 2.88
CHRNB1-206ENST00000574054 TCOF1Q13428 1488 aaKnown RBP33.05■■■□□ 2.88
CHRNB1-206ENST00000574054 LTBP4Q8N2S1 1624 aa33.04■■■□□ 2.88
CHRNB1-206ENST00000574054 DNMT1P26358 1616 aaKnown RBP33.03■■■□□ 2.88
CHRNB1-206ENST00000574054 PTPN23Q9H3S7 1636 aa33.03■■■□□ 2.88
CHRNB1-206ENST00000574054 EIF2AK4Q9P2K8 1649 aaKnown RBP33.01■■■□□ 2.87
CHRNB1-206ENST00000574054 ABCC3O15438 1527 aa33■■■□□ 2.87
CHRNB1-206ENST00000574054 DUOX2Q9NRD8 1548 aa33■■■□□ 2.87
CHRNB1-206ENST00000574054 ABCC5O15440 1437 aa33■■■□□ 2.87
CHRNB1-206ENST00000574054 FGD6Q6ZV73 1430 aa32.99■■■□□ 2.87
CHRNB1-206ENST00000574054 ZNF335Q9H4Z2 1342 aaPredicted RBP32.99■■■□□ 2.87
CHRNB1-206ENST00000574054 KIF15Q9NS87 1388 aa32.98■■■□□ 2.87
CHRNB1-206ENST00000574054 SHANK2Q9UPX8 1470 aa32.98■■■□□ 2.87
CHRNB1-206ENST00000574054 RRP7BPQ9NSQ0 103 aa32.97■■■□□ 2.87
CHRNB1-206ENST00000574054 CROCC2H7BZ55 1655 aa32.95■■■□□ 2.87
CHRNB1-206ENST00000574054 ZC3H13Q5T200 1668 aaKnown RBP32.94■■■□□ 2.86
CHRNB1-206ENST00000574054 DAPK1P53355 1430 aa32.94■■■□□ 2.86
CHRNB1-206ENST00000574054 NLRP1Q9C000 1473 aa32.93■■■□□ 2.86
CHRNB1-206ENST00000574054 MROH1Q8NDA8 1641 aa32.93■■■□□ 2.86
CHRNB1-206ENST00000574054 IQSEC2Q5JU85 1478 aa32.9■■■□□ 2.86
CHRNB1-206ENST00000574054 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.89■■■□□ 2.86
CHRNB1-206ENST00000574054 THEMISQ8N1K5 641 aaPredicted RBP32.89■■■□□ 2.86
CHRNB1-206ENST00000574054 ERBINQ96RT1 1412 aa32.88■■■□□ 2.85
CHRNB1-206ENST00000574054 CHIC2Q9UKJ5 165 aa32.88■■■□□ 2.85
CHRNB1-206ENST00000574054 UGGT1Q9NYU2 1555 aa32.87■■■□□ 2.85
CHRNB1-206ENST00000574054 CEP152O94986 1710 aa32.87■■■□□ 2.85
CHRNB1-206ENST00000574054 ERVK-7P63135 1459 aa32.86■■■□□ 2.85
CHRNB1-206ENST00000574054 POLR1AO95602 1720 aaPredicted RBP32.86■■■□□ 2.85
CHRNB1-206ENST00000574054 ANKLE2Q86XL3 938 aa32.86■■■□□ 2.85
CHRNB1-206ENST00000574054 SPATA31D1Q6ZQQ2 1576 aa32.85■■■□□ 2.85
CHRNB1-206ENST00000574054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.84■■■□□ 2.85
CHRNB1-206ENST00000574054 NEURL4Q96JN8 1562 aa32.83■■■□□ 2.85
CHRNB1-206ENST00000574054 ANKRD30AQ9BXX3 1397 aa32.83■■■□□ 2.85
CHRNB1-206ENST00000574054 PRDM15P57071 1507 aaPredicted RBP32.81■■■□□ 2.84
CHRNB1-206ENST00000574054 FAM50AQ14320 339 aaKnown RBP32.8■■■□□ 2.84
CHRNB1-206ENST00000574054 CFAP65Q6ZU64 1925 aaKnown RBP32.77■■■□□ 2.84
CHRNB1-206ENST00000574054 KANK1Q14678 1352 aa32.77■■■□□ 2.84
CHRNB1-206ENST00000574054 UBAP1LF5GYI3 381 aa32.76■■■□□ 2.83
CHRNB1-206ENST00000574054 NPHP4O75161 1426 aaPredicted RBP32.74■■■□□ 2.83
CHRNB1-206ENST00000574054 ARHGAP31Q2M1Z3 1444 aa32.73■■■□□ 2.83
CHRNB1-206ENST00000574054 DEPDC5O75140 1603 aa32.72■■■□□ 2.83
CHRNB1-206ENST00000574054 MED14O60244 1454 aa32.69■■■□□ 2.82
CHRNB1-206ENST00000574054 ADGRL2O95490 1459 aa32.67■■■□□ 2.82
CHRNB1-206ENST00000574054 CPS1P31327 1500 aa32.67■■■□□ 2.82
CHRNB1-206ENST00000574054 IQGAP1P46940 1657 aa32.64■■■□□ 2.82
CHRNB1-206ENST00000574054 UBR1Q8IWV7 1749 aa32.64■■■□□ 2.82
CHRNB1-206ENST00000574054 VWDEQ8N2E2 1590 aa32.63■■■□□ 2.81
CHRNB1-206ENST00000574054 LMTK2Q8IWU2 1503 aa32.61■■■□□ 2.81
CHRNB1-206ENST00000574054 DISP3Q9P2K9 1392 aa32.59■■■□□ 2.81
CHRNB1-206ENST00000574054 STAG3Q9UJ98 1225 aa32.58■■■□□ 2.81
CHRNB1-206ENST00000574054 SCAF11Q99590 1463 aaKnown RBP32.58■■■□□ 2.81
CHRNB1-206ENST00000574054 ANKRD50Q9ULJ7 1429 aa32.57■■■□□ 2.8
CHRNB1-206ENST00000574054 SCAF1Q9H7N4 1312 aaKnown RBP32.56■■■□□ 2.8
CHRNB1-206ENST00000574054 TXNDC2Q86VQ3 553 aa32.56■■■□□ 2.8
CHRNB1-206ENST00000574054 LTKP29376 864 aa32.54■■■□□ 2.8
CHRNB1-206ENST00000574054 PIK3C2BO00750 1634 aa32.54■■■□□ 2.8
CHRNB1-206ENST00000574054 ARHGAP23Q9P227 1491 aa32.54■■■□□ 2.8
CHRNB1-206ENST00000574054 SLIT1O75093 1534 aa32.53■■■□□ 2.8
CHRNB1-206ENST00000574054 EFCAB6Q5THR3 1501 aa32.53■■■□□ 2.8
CHRNB1-206ENST00000574054 EID1Q9Y6B2 187 aa32.53■■■□□ 2.8
CHRNB1-206ENST00000574054 TOM1O60784 492 aa32.52■■■□□ 2.8
CHRNB1-206ENST00000574054 PIP4K2BP78356 416 aa32.52■■■□□ 2.8
CHRNB1-206ENST00000574054 IDI1Q13907 227 aa32.5■■■□□ 2.79
CHRNB1-206ENST00000574054 PPARGC1BQ86YN6 1023 aaKnown RBP32.5■■■□□ 2.79
CHRNB1-206ENST00000574054 SYNMO15061 1565 aa32.48■■■□□ 2.79
CHRNB1-206ENST00000574054 TMEM2Q9UHN6 1383 aa32.47■■■□□ 2.79
CHRNB1-206ENST00000574054 NOS1P29475 1434 aa32.46■■■□□ 2.79
CHRNB1-206ENST00000574054 STRCP1A6NGW2 1772 aa32.43■■■□□ 2.78
CHRNB1-206ENST00000574054 ITGAEP38570 1179 aa32.43■■■□□ 2.78
CHRNB1-206ENST00000574054 LRRC7Q96NW7 1537 aa32.41■■■□□ 2.78
CHRNB1-206ENST00000574054 SLC52A1Q9NWF4 448 aa32.4■■■□□ 2.78
CHRNB1-206ENST00000574054 ROCK1Q13464 1354 aa32.4■■■□□ 2.78
CHRNB1-206ENST00000574054 KDM5AP29375 1690 aaKnown RBP32.4■■■□□ 2.78
CHRNB1-206ENST00000574054 RPRD2Q5VT52 1461 aaKnown RBP32.39■■■□□ 2.78
CHRNB1-206ENST00000574054 ADGRB3O60242 1522 aa32.38■■■□□ 2.77
CHRNB1-206ENST00000574054 HSPA1LP34931 641 aa32.38■■■□□ 2.77
CHRNB1-206ENST00000574054 TET3O43151 1660 aa32.37■■■□□ 2.77
CHRNB1-206ENST00000574054 UNC13BO14795 1591 aa32.36■■■□□ 2.77
CHRNB1-206ENST00000574054 ILDR2Q71H61 639 aa32.35■■■□□ 2.77
CHRNB1-206ENST00000574054 ALKQ9UM73 1620 aa32.3■■■□□ 2.76
CHRNB1-206ENST00000574054 GCC2Q8IWJ2 1684 aa32.3■■■□□ 2.76
CHRNB1-206ENST00000574054 BCANQ96GW7 911 aa32.29■■■□□ 2.76
CHRNB1-206ENST00000574054 SLC26A8Q96RN1 970 aa32.29■■■□□ 2.76
CHRNB1-206ENST00000574054 SENP3Q9H4L4 574 aaPredicted RBP32.26■■■□□ 2.75
CHRNB1-206ENST00000574054 NUP155O75694 1391 aa32.25■■■□□ 2.75
CHRNB1-206ENST00000574054 CHGAP10645 457 aaKnown RBP32.24■■■□□ 2.75
CHRNB1-206ENST00000574054 IQGAP3Q86VI3 1631 aa32.22■■■□□ 2.75
CHRNB1-206ENST00000574054 PPP1R15AO75807 674 aaPredicted RBP32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms