RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 CAMSAP1Q5T5Y3 1602 aa17.66■□□□□ 0.42
RPAIN-214ENST00000574003 FBXO41Q8TF61 875 aa17.66■□□□□ 0.42
RPAIN-214ENST00000574003 RRP7BPQ9NSQ0 103 aa17.66■□□□□ 0.42
RPAIN-214ENST00000574003 CHIC2Q9UKJ5 165 aa17.66■□□□□ 0.42
RPAIN-214ENST00000574003 KDM5DQ9BY66 1539 aa17.66■□□□□ 0.42
RPAIN-214ENST00000574003 NCKAP5LQ9HCH0 1330 aa17.66■□□□□ 0.42
RPAIN-214ENST00000574003 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
RPAIN-214ENST00000574003 DAPK1P53355 1430 aa17.64■□□□□ 0.42
RPAIN-214ENST00000574003 TCOF1Q13428 1488 aaKnown RBP17.64■□□□□ 0.41
RPAIN-214ENST00000574003 CROCC2H7BZ55 1655 aa17.64■□□□□ 0.41
RPAIN-214ENST00000574003 CEP170BQ9Y4F5 1589 aaPredicted RBP17.63■□□□□ 0.41
RPAIN-214ENST00000574003 CERKQ8TCT0 537 aa17.63■□□□□ 0.41
RPAIN-214ENST00000574003 KIF15Q9NS87 1388 aa17.63■□□□□ 0.41
RPAIN-214ENST00000574003 DNMT1P26358 1616 aaKnown RBP17.62■□□□□ 0.41
RPAIN-214ENST00000574003 MROH1Q8NDA8 1641 aa17.62■□□□□ 0.41
RPAIN-214ENST00000574003 RNF17Q9BXT8 1623 aaKnown RBP17.62■□□□□ 0.41
RPAIN-214ENST00000574003 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
RPAIN-214ENST00000574003 TNRQ92752 1358 aa17.62■□□□□ 0.41
RPAIN-214ENST00000574003 PZPP20742 1482 aa17.62■□□□□ 0.41
RPAIN-214ENST00000574003 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-214ENST00000574003 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
RPAIN-214ENST00000574003 ABCC3O15438 1527 aa17.61■□□□□ 0.41
RPAIN-214ENST00000574003 DUOX2Q9NRD8 1548 aa17.61■□□□□ 0.41
RPAIN-214ENST00000574003 PTPRTO14522 1441 aa17.6■□□□□ 0.41
RPAIN-214ENST00000574003 SHANK2Q9UPX8 1470 aa17.6■□□□□ 0.41
RPAIN-214ENST00000574003 CFAP65Q6ZU64 1925 aaKnown RBP17.59■□□□□ 0.41
RPAIN-214ENST00000574003 CEP152O94986 1710 aa17.59■□□□□ 0.41
RPAIN-214ENST00000574003 EIF2AK4Q9P2K8 1649 aaKnown RBP17.59■□□□□ 0.41
RPAIN-214ENST00000574003 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.41
RPAIN-214ENST00000574003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.42e-6■□□□□ 10.3
RPAIN-214ENST00000574003 FAM135AQ9P2D6 1515 aa17.57■□□□□ 0.4
RPAIN-214ENST00000574003 ERBINQ96RT1 1412 aa17.54■□□□□ 0.4
RPAIN-214ENST00000574003 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
RPAIN-214ENST00000574003 PLA2R1Q13018 1463 aa17.53■□□□□ 0.4
RPAIN-214ENST00000574003 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.4
RPAIN-214ENST00000574003 ZC3H13Q5T200 1668 aaKnown RBP17.52■□□□□ 0.4
RPAIN-214ENST00000574003 LTBP4Q8N2S1 1624 aa17.52■□□□□ 0.4
RPAIN-214ENST00000574003 PKD2Q13563 968 aa17.52■□□□□ 0.4
RPAIN-214ENST00000574003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.52■□□□□ 0.39
RPAIN-214ENST00000574003 ERVK-7P63135 1459 aa17.51■□□□□ 0.39
RPAIN-214ENST00000574003 PRDM15P57071 1507 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-214ENST00000574003 SPATA31D1Q6ZQQ2 1576 aa17.5■□□□□ 0.39
RPAIN-214ENST00000574003 ADGRL2O95490 1459 aa17.48■□□□□ 0.39
RPAIN-214ENST00000574003 NLRP1Q9C000 1473 aa17.48■□□□□ 0.39
RPAIN-214ENST00000574003 UGGT1Q9NYU2 1555 aa17.48■□□□□ 0.39
RPAIN-214ENST00000574003 DEPDC5O75140 1603 aa17.47■□□□□ 0.39
RPAIN-214ENST00000574003 ITGAEP38570 1179 aa17.47■□□□□ 0.39
RPAIN-214ENST00000574003 NEURL4Q96JN8 1562 aa17.47■□□□□ 0.39
RPAIN-214ENST00000574003 THEMISQ8N1K5 641 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-214ENST00000574003 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-214ENST00000574003 KANK1Q14678 1352 aa17.44■□□□□ 0.38
RPAIN-214ENST00000574003 ANKLE2Q86XL3 938 aa17.44■□□□□ 0.38
RPAIN-214ENST00000574003 ANKRD50Q9ULJ7 1429 aa17.43■□□□□ 0.38
RPAIN-214ENST00000574003 VWDEQ8N2E2 1590 aa17.43■□□□□ 0.38
RPAIN-214ENST00000574003 ARHGAP31Q2M1Z3 1444 aa17.42■□□□□ 0.38
RPAIN-214ENST00000574003 UBR1Q8IWV7 1749 aa17.4■□□□□ 0.38
RPAIN-214ENST00000574003 NPHP4O75161 1426 aaPredicted RBP17.39■□□□□ 0.38
RPAIN-214ENST00000574003 LMTK2Q8IWU2 1503 aa17.39■□□□□ 0.37
RPAIN-214ENST00000574003 PIK3C2BO00750 1634 aa17.37■□□□□ 0.37
RPAIN-214ENST00000574003 LTKP29376 864 aa17.37■□□□□ 0.37
RPAIN-214ENST00000574003 IDI1Q13907 227 aa17.37■□□□□ 0.37
RPAIN-214ENST00000574003 SYNMO15061 1565 aa17.36■□□□□ 0.37
RPAIN-214ENST00000574003 EFCAB6Q5THR3 1501 aa17.36■□□□□ 0.37
RPAIN-214ENST00000574003 MED14O60244 1454 aa17.35■□□□□ 0.37
RPAIN-214ENST00000574003 IQGAP1P46940 1657 aa17.34■□□□□ 0.37
RPAIN-214ENST00000574003 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
RPAIN-214ENST00000574003 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
RPAIN-214ENST00000574003 NOS1P29475 1434 aa17.33■□□□□ 0.36
RPAIN-214ENST00000574003 UBAP1LF5GYI3 381 aa17.33■□□□□ 0.36
RPAIN-214ENST00000574003 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
RPAIN-214ENST00000574003 IQSEC2Q5JU85 1478 aa17.32■□□□□ 0.36
RPAIN-214ENST00000574003 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
RPAIN-214ENST00000574003 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
RPAIN-214ENST00000574003 UNC13BO14795 1591 aa17.32■□□□□ 0.36
RPAIN-214ENST00000574003 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
RPAIN-214ENST00000574003 STRCP1A6NGW2 1772 aa17.3■□□□□ 0.36
RPAIN-214ENST00000574003 SLIT1O75093 1534 aa17.3■□□□□ 0.36
RPAIN-214ENST00000574003 TET3O43151 1660 aa17.29■□□□□ 0.36
RPAIN-214ENST00000574003 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
RPAIN-214ENST00000574003 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
RPAIN-214ENST00000574003 NUP155O75694 1391 aa17.28■□□□□ 0.36
RPAIN-214ENST00000574003 CPS1P31327 1500 aa17.26■□□□□ 0.35
RPAIN-214ENST00000574003 E9PCH4 1651 aa17.26■□□□□ 0.35
RPAIN-214ENST00000574003 EID1Q9Y6B2 187 aa17.26■□□□□ 0.35
RPAIN-214ENST00000574003 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
RPAIN-214ENST00000574003 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
RPAIN-214ENST00000574003 MYO5BQ9ULV0 1848 aa17.26■□□□□ 0.35
RPAIN-214ENST00000574003 IQGAP3Q86VI3 1631 aa17.25■□□□□ 0.35
RPAIN-214ENST00000574003 RPRD2Q5VT52 1461 aaKnown RBP17.24■□□□□ 0.35
RPAIN-214ENST00000574003 PIP4K2BP78356 416 aa17.24■□□□□ 0.35
RPAIN-214ENST00000574003 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
RPAIN-214ENST00000574003 CHGAP10645 457 aaKnown RBP17.23■□□□□ 0.35
RPAIN-214ENST00000574003 SLC52A1Q9NWF4 448 aa17.23■□□□□ 0.35
RPAIN-214ENST00000574003 LRRC7Q96NW7 1537 aa17.22■□□□□ 0.35
RPAIN-214ENST00000574003 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
RPAIN-214ENST00000574003 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
RPAIN-214ENST00000574003 KDM5AP29375 1690 aaKnown RBP17.21■□□□□ 0.35
RPAIN-214ENST00000574003 TMEM131LA2VDJ0 1609 aa17.19■□□□□ 0.34
RPAIN-214ENST00000574003 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
RPAIN-214ENST00000574003 NAIPQ13075 1403 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms