RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 HSPA2P54652 639 aa15.73■□□□□ 0.11
RPA1-206ENST00000573994 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
RPA1-206ENST00000573994 MYOM3Q5VTT5 1437 aa15.7■□□□□ 0.1
RPA1-206ENST00000573994 RTEL1-TNFRSF6BF6WH68 1400 aa15.69■□□□□ 0.1
RPA1-206ENST00000573994 CNTLNQ9NXG0 1405 aa15.68■□□□□ 0.1
RPA1-206ENST00000573994 ADGBQ8N7X0 1667 aa15.68■□□□□ 0.1
RPA1-206ENST00000573994 ARHGEF5Q12774 1597 aa15.68■□□□□ 0.1
RPA1-206ENST00000573994 C3P01024 1663 aa15.67■□□□□ 0.1
RPA1-206ENST00000573994 GGT6Q6P531 493 aa15.66■□□□□ 0.1
RPA1-206ENST00000573994 UHRF1BP1Q6BDS2 1440 aa15.66■□□□□ 0.1
RPA1-206ENST00000573994 PREX1Q8TCU6 1659 aa15.66■□□□□ 0.1
RPA1-206ENST00000573994 MIA2Q96PC5 1412 aa15.65■□□□□ 0.1
RPA1-206ENST00000573994 DHX29Q7Z478 1369 aaKnown RBP15.64■□□□□ 0.09
RPA1-206ENST00000573994 CLTCQ00610 1675 aaKnown RBP15.63■□□□□ 0.09
RPA1-206ENST00000573994 RSPH4AQ5TD94 716 aa15.63■□□□□ 0.09
RPA1-206ENST00000573994 TSPY4P0CV99 314 aa15.62■□□□□ 0.09
RPA1-206ENST00000573994 TSPY10P0CW01 314 aa15.62■□□□□ 0.09
RPA1-206ENST00000573994 ZMYM3Q14202 1370 aa15.62■□□□□ 0.09
RPA1-206ENST00000573994 MROH2AA6NES4 1674 aa15.61■□□□□ 0.09
RPA1-206ENST00000573994 KIF3BO15066 747 aa15.61■□□□□ 0.09
RPA1-206ENST00000573994 MAST1Q9Y2H9 1570 aa15.6■□□□□ 0.09
RPA1-206ENST00000573994 PTPN23Q9H3S7 1636 aa15.6■□□□□ 0.09
RPA1-206ENST00000573994 FGD6Q6ZV73 1430 aa15.6■□□□□ 0.09
RPA1-206ENST00000573994 NPATQ14207 1427 aa15.59■□□□□ 0.09
RPA1-206ENST00000573994 ILDR1Q86SU0 546 aaPredicted RBP15.57■□□□□ 0.08
RPA1-206ENST00000573994 PTPRKQ15262 1439 aa15.57■□□□□ 0.08
RPA1-206ENST00000573994 ABCC5O15440 1437 aa15.56■□□□□ 0.08
RPA1-206ENST00000573994 KDM5DQ9BY66 1539 aa15.56■□□□□ 0.08
RPA1-206ENST00000573994 TCOF1Q13428 1488 aaKnown RBP15.55■□□□□ 0.08
RPA1-206ENST00000573994 SHANK2Q9UPX8 1470 aa15.55■□□□□ 0.08
RPA1-206ENST00000573994 POLA2Q14181 598 aa15.55■□□□□ 0.08
RPA1-206ENST00000573994 DAPK1P53355 1430 aa15.54■□□□□ 0.08
RPA1-206ENST00000573994 CROCC2H7BZ55 1655 aa15.54■□□□□ 0.08
RPA1-206ENST00000573994 MYO3AQ8NEV4 1616 aa15.54■□□□□ 0.08
RPA1-206ENST00000573994 KIF15Q9NS87 1388 aa15.53■□□□□ 0.08
RPA1-206ENST00000573994 DNMT1P26358 1616 aaKnown RBP15.53■□□□□ 0.08
RPA1-206ENST00000573994 WASHC2CQ9Y4E1 1318 aa15.52■□□□□ 0.08
RPA1-206ENST00000573994 RNF17Q9BXT8 1623 aaKnown RBP15.52■□□□□ 0.08
RPA1-206ENST00000573994 ZBTB22O15209 634 aa15.51■□□□□ 0.07
RPA1-206ENST00000573994 DUOX2Q9NRD8 1548 aa15.51■□□□□ 0.07
RPA1-206ENST00000573994 FAM135AQ9P2D6 1515 aa15.51■□□□□ 0.07
RPA1-206ENST00000573994 NCOA1Q15788 1441 aa15.51■□□□□ 0.07
RPA1-206ENST00000573994 STRCQ7RTU9 1775 aa15.5■□□□□ 0.07
RPA1-206ENST00000573994 ABCC3O15438 1527 aa15.5■□□□□ 0.07
RPA1-206ENST00000573994 SETD1BQ9UPS6 1966 aaKnown RBP15.5■□□□□ 0.07
RPA1-206ENST00000573994 RRP7BPQ9NSQ0 103 aa15.5■□□□□ 0.07
RPA1-206ENST00000573994 PZPP20742 1482 aa15.5■□□□□ 0.07
RPA1-206ENST00000573994 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
RPA1-206ENST00000573994 CEP170BQ9Y4F5 1589 aaPredicted RBP15.49■□□□□ 0.07
RPA1-206ENST00000573994 FAM50AQ14320 339 aaKnown RBP15.49■□□□□ 0.07
RPA1-206ENST00000573994 FBXO31Q5XUX0 539 aaPredicted RBP15.49■□□□□ 0.07
RPA1-206ENST00000573994 CHIC2Q9UKJ5 165 aa15.49■□□□□ 0.07
RPA1-206ENST00000573994 CAMSAP1Q5T5Y3 1602 aa15.49■□□□□ 0.07
RPA1-206ENST00000573994 MROH1Q8NDA8 1641 aa15.49■□□□□ 0.07
RPA1-206ENST00000573994 TNRQ92752 1358 aa15.49■□□□□ 0.07
RPA1-206ENST00000573994 ZNF142P52746 1687 aaPredicted RBP15.48■□□□□ 0.07
RPA1-206ENST00000573994 ATXN8OSP0DMR3 200 aa15.48■□□□□ 0.07
RPA1-206ENST00000573994 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
RPA1-206ENST00000573994 ERBINQ96RT1 1412 aa15.47■□□□□ 0.07
RPA1-206ENST00000573994 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
RPA1-206ENST00000573994 PPARGC1BQ86YN6 1023 aaKnown RBP15.46■□□□□ 0.07
RPA1-206ENST00000573994 ANKRD30AQ9BXX3 1397 aa15.45■□□□□ 0.06
RPA1-206ENST00000573994 A2ML1A8K2U0 1454 aa15.45■□□□□ 0.06
RPA1-206ENST00000573994 NCKAP5LQ9HCH0 1330 aa15.44■□□□□ 0.06
RPA1-206ENST00000573994 ZC3H13Q5T200 1668 aaKnown RBP15.44■□□□□ 0.06
RPA1-206ENST00000573994 PTPRTO14522 1441 aa15.43■□□□□ 0.06
RPA1-206ENST00000573994 PRDM15P57071 1507 aaPredicted RBP15.43■□□□□ 0.06
RPA1-206ENST00000573994 PLA2R1Q13018 1463 aa15.42■□□□□ 0.06
RPA1-206ENST00000573994 FBXO41Q8TF61 875 aa15.42■□□□□ 0.06
RPA1-206ENST00000573994 CEP152O94986 1710 aa15.42■□□□□ 0.06
RPA1-206ENST00000573994 ADGRL2O95490 1459 aa15.41■□□□□ 0.06
RPA1-206ENST00000573994 ERVK-7P63135 1459 aa15.41■□□□□ 0.06
RPA1-206ENST00000573994 CERKQ8TCT0 537 aa15.4■□□□□ 0.06
RPA1-206ENST00000573994 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
RPA1-206ENST00000573994 SPATA31D1Q6ZQQ2 1576 aa15.39■□□□□ 0.05
RPA1-206ENST00000573994 NLRP1Q9C000 1473 aa15.39■□□□□ 0.05
RPA1-206ENST00000573994 DEPDC5O75140 1603 aa15.39■□□□□ 0.05
RPA1-206ENST00000573994 KANK1Q14678 1352 aa15.36■□□□□ 0.05
RPA1-206ENST00000573994 PKD2Q13563 968 aa15.36■□□□□ 0.05
RPA1-206ENST00000573994 UGGT1Q9NYU2 1555 aa15.36■□□□□ 0.05
RPA1-206ENST00000573994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.36■□□□□ 0.05
RPA1-206ENST00000573994 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
RPA1-206ENST00000573994 NEURL4Q96JN8 1562 aa15.34■□□□□ 0.05
RPA1-206ENST00000573994 ITGAEP38570 1179 aa15.34■□□□□ 0.05
RPA1-206ENST00000573994 ZNF335Q9H4Z2 1342 aaPredicted RBP15.34■□□□□ 0.05
RPA1-206ENST00000573994 ARHGAP31Q2M1Z3 1444 aa15.34■□□□□ 0.05
RPA1-206ENST00000573994 VWDEQ8N2E2 1590 aa15.33■□□□□ 0.05
RPA1-206ENST00000573994 LTBP4Q8N2S1 1624 aa15.33■□□□□ 0.04
RPA1-206ENST00000573994 LMTK2Q8IWU2 1503 aa15.33■□□□□ 0.04
RPA1-206ENST00000573994 EFCAB6Q5THR3 1501 aa15.31■□□□□ 0.04
RPA1-206ENST00000573994 POLR1AO95602 1720 aaPredicted RBP15.3■□□□□ 0.04
RPA1-206ENST00000573994 THEMISQ8N1K5 641 aaPredicted RBP15.3■□□□□ 0.04
RPA1-206ENST00000573994 ROCK1Q13464 1354 aa15.29■□□□□ 0.04
RPA1-206ENST00000573994 ANKLE2Q86XL3 938 aa15.28■□□□□ 0.04
RPA1-206ENST00000573994 NPHP4O75161 1426 aaPredicted RBP15.27■□□□□ 0.04
RPA1-206ENST00000573994 UBR1Q8IWV7 1749 aa15.26■□□□□ 0.03
RPA1-206ENST00000573994 UNC13BO14795 1591 aa15.26■□□□□ 0.03
RPA1-206ENST00000573994 SYNMO15061 1565 aa15.26■□□□□ 0.03
RPA1-206ENST00000573994 CFAP65Q6ZU64 1925 aaKnown RBP15.25■□□□□ 0.03
RPA1-206ENST00000573994 RRBP1Q9P2E9 1410 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms