RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 RNF17Q9BXT8 1623 aaKnown RBP42.8■■■■■ 4.44
SCARF1-207ENST00000573867 PREX1Q8TCU6 1659 aa42.79■■■■■ 4.44
SCARF1-207ENST00000573867 MROH1Q8NDA8 1641 aa42.75■■■■■ 4.43
SCARF1-207ENST00000573867 ADGRL2O95490 1459 aa42.75■■■■■ 4.43
SCARF1-207ENST00000573867 PTPRKQ15262 1439 aa42.75■■■■■ 4.43
SCARF1-207ENST00000573867 NCOA1Q15788 1441 aa42.75■■■■■ 4.43
SCARF1-207ENST00000573867 HSPA2P54652 639 aa42.75■■■■■ 4.43
SCARF1-207ENST00000573867 KDM5DQ9BY66 1539 aa42.75■■■■■ 4.43
SCARF1-207ENST00000573867 ANKRD30AQ9BXX3 1397 aa42.74■■■■■ 4.43
SCARF1-207ENST00000573867 FAM135AQ9P2D6 1515 aa42.72■■■■■ 4.43
SCARF1-207ENST00000573867 ERBINQ96RT1 1412 aa42.71■■■■■ 4.43
SCARF1-207ENST00000573867 NPATQ14207 1427 aa42.71■■■■■ 4.43
SCARF1-207ENST00000573867 UHRF1BP1Q6BDS2 1440 aa42.68■■■■■ 4.42
SCARF1-207ENST00000573867 SETD1BQ9UPS6 1966 aaKnown RBP42.67■■■■■ 4.42
SCARF1-207ENST00000573867 WASHC2CQ9Y4E1 1318 aa42.66■■■■■ 4.42
SCARF1-207ENST00000573867 ABCC3O15438 1527 aa42.63■■■■■ 4.42
SCARF1-207ENST00000573867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP42.63■■■■■ 4.41
SCARF1-207ENST00000573867 RRBP1Q9P2E9 1410 aaKnown RBP42.59■■■■■ 4.41
SCARF1-207ENST00000573867 PRDM15P57071 1507 aaPredicted RBP42.58■■■■■ 4.41
SCARF1-207ENST00000573867 PZPP20742 1482 aa42.57■■■■■ 4.41
SCARF1-207ENST00000573867 DEPDC5O75140 1603 aa42.57■■■■■ 4.4
SCARF1-207ENST00000573867 ZC3H13Q5T200 1668 aaKnown RBP42.56■■■■■ 4.4
SCARF1-207ENST00000573867 FBXO31Q5XUX0 539 aaPredicted RBP42.54■■■■■ 4.4
SCARF1-207ENST00000573867 CEP152O94986 1710 aa42.53■■■■■ 4.4
SCARF1-207ENST00000573867 MYO3AQ8NEV4 1616 aa42.52■■■■■ 4.4
SCARF1-207ENST00000573867 ITGAEP38570 1179 aa42.51■■■■■ 4.4
SCARF1-207ENST00000573867 ROCK1Q13464 1354 aa42.49■■■■■ 4.39
SCARF1-207ENST00000573867 ANKRD50Q9ULJ7 1429 aa42.48■■■■■ 4.39
SCARF1-207ENST00000573867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP42.46■■■■■ 4.39
SCARF1-207ENST00000573867 CAMSAP1Q5T5Y3 1602 aa42.46■■■■■ 4.39
SCARF1-207ENST00000573867 ZNF142P52746 1687 aaPredicted RBP42.43■■■■■ 4.38
SCARF1-207ENST00000573867 TNRQ92752 1358 aa42.42■■■■■ 4.38
SCARF1-207ENST00000573867 VWDEQ8N2E2 1590 aa42.42■■■■■ 4.38
SCARF1-207ENST00000573867 CEP170BQ9Y4F5 1589 aaPredicted RBP42.41■■■■■ 4.38
SCARF1-207ENST00000573867 STRCQ7RTU9 1775 aa42.39■■■■■ 4.38
SCARF1-207ENST00000573867 ERVK-7P63135 1459 aa42.35■■■■■ 4.37
SCARF1-207ENST00000573867 SPATA31D1Q6ZQQ2 1576 aa42.35■■■■■ 4.37
SCARF1-207ENST00000573867 KANK1Q14678 1352 aa42.34■■■■■ 4.37
SCARF1-207ENST00000573867 LMTK2Q8IWU2 1503 aa42.34■■■■■ 4.37
SCARF1-207ENST00000573867 A2ML1A8K2U0 1454 aa42.33■■■■■ 4.37
SCARF1-207ENST00000573867 ARHGAP31Q2M1Z3 1444 aa42.32■■■■■ 4.37
SCARF1-207ENST00000573867 UNC13BO14795 1591 aa42.27■■■■■ 4.36
SCARF1-207ENST00000573867 NLRP1Q9C000 1473 aa42.23■■■■■ 4.35
SCARF1-207ENST00000573867 EFCAB6Q5THR3 1501 aa42.21■■■■■ 4.35
SCARF1-207ENST00000573867 CFAP65Q6ZU64 1925 aaKnown RBP42.2■■■■■ 4.35
SCARF1-207ENST00000573867 PLA2R1Q13018 1463 aa42.18■■■■■ 4.34
SCARF1-207ENST00000573867 NCKAP5LQ9HCH0 1330 aa42.14■■■■■ 4.34
SCARF1-207ENST00000573867 NAIPQ13075 1403 aa42.13■■■■■ 4.34
SCARF1-207ENST00000573867 UGGT1Q9NYU2 1555 aa42.11■■■■■ 4.33
SCARF1-207ENST00000573867 PTPRTO14522 1441 aa42.11■■■■■ 4.33
SCARF1-207ENST00000573867 TET3O43151 1660 aa42.1■■■■■ 4.33
SCARF1-207ENST00000573867 IQGAP3Q86VI3 1631 aa42.09■■■■■ 4.33
SCARF1-207ENST00000573867 DMRT2Q9Y5R5 561 aa42.08■■■■■ 4.33
SCARF1-207ENST00000573867 GCC2Q8IWJ2 1684 aa42.08■■■■■ 4.33
SCARF1-207ENST00000573867 SYNMO15061 1565 aa42.06■■■■■ 4.32
SCARF1-207ENST00000573867 NOS1P29475 1434 aa42.06■■■■■ 4.32
SCARF1-207ENST00000573867 NUP155O75694 1391 aa42.03■■■■■ 4.32
SCARF1-207ENST00000573867 HFM1A2PYH4 1435 aa42.03■■■■■ 4.32
SCARF1-207ENST00000573867 RPRD2Q5VT52 1461 aaKnown RBP42.02■■■■■ 4.32
SCARF1-207ENST00000573867 PKD2Q13563 968 aa42.01■■■■■ 4.32
SCARF1-207ENST00000573867 UBR1Q8IWV7 1749 aa42■■■■■ 4.31
SCARF1-207ENST00000573867 THEMISQ8N1K5 641 aaPredicted RBP42■■■■■ 4.31
SCARF1-207ENST00000573867 NEURL4Q96JN8 1562 aa41.97■■■■■ 4.31
SCARF1-207ENST00000573867 E9PCH4 1651 aa41.97■■■■■ 4.31
SCARF1-207ENST00000573867 PIK3C2BO00750 1634 aa41.97■■■■■ 4.31
SCARF1-207ENST00000573867 POLR1AO95602 1720 aaPredicted RBP41.94■■■■■ 4.3
SCARF1-207ENST00000573867 IDI1Q13907 227 aa41.92■■■■■ 4.3
SCARF1-207ENST00000573867 ANKLE2Q86XL3 938 aa41.87■■■■■ 4.29
SCARF1-207ENST00000573867 ARHGAP23Q9P227 1491 aa41.85■■■■■ 4.29
SCARF1-207ENST00000573867 SLIT1O75093 1534 aa41.82■■■■■ 4.29
SCARF1-207ENST00000573867 MED14O60244 1454 aa41.81■■■■■ 4.28
SCARF1-207ENST00000573867 SLC52A1Q9NWF4 448 aa41.81■■■■■ 4.28
SCARF1-207ENST00000573867 KDM5AP29375 1690 aaKnown RBP41.8■■■■■ 4.28
SCARF1-207ENST00000573867 LTBP4Q8N2S1 1624 aa41.8■■■■■ 4.28
SCARF1-207ENST00000573867 ADGRB3O60242 1522 aa41.8■■■■■ 4.28
SCARF1-207ENST00000573867 NPHP4O75161 1426 aaPredicted RBP41.77■■■■■ 4.28
SCARF1-207ENST00000573867 CERKQ8TCT0 537 aa41.76■■■■■ 4.28
SCARF1-207ENST00000573867 ZNF335Q9H4Z2 1342 aaPredicted RBP41.75■■■■■ 4.27
SCARF1-207ENST00000573867 LTKP29376 864 aa41.75■■■■■ 4.27
SCARF1-207ENST00000573867 TMEM2Q9UHN6 1383 aa41.75■■■■■ 4.27
SCARF1-207ENST00000573867 ILDR1Q86SU0 546 aaPredicted RBP41.74■■■■■ 4.27
SCARF1-207ENST00000573867 STAG3Q9UJ98 1225 aa41.74■■■■■ 4.27
SCARF1-207ENST00000573867 SCAF11Q99590 1463 aaKnown RBP41.73■■■■■ 4.27
SCARF1-207ENST00000573867 IQGAP1P46940 1657 aa41.71■■■■■ 4.27
SCARF1-207ENST00000573867 TRIM52Q96A61 297 aa41.7■■■■■ 4.27
SCARF1-207ENST00000573867 TMEM131LA2VDJ0 1609 aa41.68■■■■■ 4.26
SCARF1-207ENST00000573867 TXNDC2Q86VQ3 553 aa41.67■■■■■ 4.26
SCARF1-207ENST00000573867 SPHKAPQ2M3C7 1700 aa41.66■■■■■ 4.26
SCARF1-207ENST00000573867 MYO5BQ9ULV0 1848 aa41.65■■■■■ 4.26
SCARF1-207ENST00000573867 FBXO41Q8TF61 875 aa41.6■■■■■ 4.25
SCARF1-207ENST00000573867 EID1Q9Y6B2 187 aa41.59■■■■■ 4.25
SCARF1-207ENST00000573867 SETD5Q9C0A6 1442 aa41.58■■■■■ 4.25
SCARF1-207ENST00000573867 ZFYVE9O95405 1425 aa41.57■■■■■ 4.25
SCARF1-207ENST00000573867 SLC4A1APQ9BWU0 796 aaKnown RBP41.56■■■■■ 4.24
SCARF1-207ENST00000573867 TRPM2O94759 1503 aa41.54■■■■■ 4.24
SCARF1-207ENST00000573867 CHGAP10645 457 aaKnown RBP41.54■■■■■ 4.24
SCARF1-207ENST00000573867 RIMS2Q9UQ26 1411 aa41.52■■■■■ 4.24
SCARF1-207ENST00000573867 CLTCL1P53675 1640 aa41.51■■■■■ 4.24
SCARF1-207ENST00000573867 RAB3GAP2Q9H2M9 1393 aa41.48■■■■■ 4.23
SCARF1-207ENST00000573867 STRCP1A6NGW2 1772 aa41.45■■■■■ 4.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms