RNA–Protein interactions for RNA: ENST00000572476.1

SLC12A4-210, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-210ENST00000572476 DNMT1P26358 1616 aaKnown RBP23.22■■□□□ 1.31
SLC12A4-210ENST00000572476 RNF17Q9BXT8 1623 aaKnown RBP23.22■■□□□ 1.31
SLC12A4-210ENST00000572476 EIF2AK4Q9P2K8 1649 aaKnown RBP23.2■■□□□ 1.3
SLC12A4-210ENST00000572476 KDM5DQ9BY66 1539 aa23.2■■□□□ 1.3
SLC12A4-210ENST00000572476 DUOX2Q9NRD8 1548 aa23.19■■□□□ 1.3
SLC12A4-210ENST00000572476 MROH1Q8NDA8 1641 aa23.16■■□□□ 1.3
SLC12A4-210ENST00000572476 PZPP20742 1482 aa23.16■■□□□ 1.3
SLC12A4-210ENST00000572476 WASHC2CQ9Y4E1 1318 aa23.15■■□□□ 1.3
SLC12A4-210ENST00000572476 ILDR1Q86SU0 546 aaPredicted RBP23.15■■□□□ 1.3
SLC12A4-210ENST00000572476 KIF15Q9NS87 1388 aa23.14■■□□□ 1.3
SLC12A4-210ENST00000572476 ZNF142P52746 1687 aaPredicted RBP23.14■■□□□ 1.29
SLC12A4-210ENST00000572476 MYO3AQ8NEV4 1616 aa23.14■■□□□ 1.29
SLC12A4-210ENST00000572476 NCOA1Q15788 1441 aa23.13■■□□□ 1.29
SLC12A4-210ENST00000572476 ERBINQ96RT1 1412 aa23.12■■□□□ 1.29
SLC12A4-210ENST00000572476 ABCC3O15438 1527 aa23.12■■□□□ 1.29
SLC12A4-210ENST00000572476 FBXO31Q5XUX0 539 aaPredicted RBP23.11■■□□□ 1.29
SLC12A4-210ENST00000572476 RRP7BPQ9NSQ0 103 aa23.11■■□□□ 1.29
SLC12A4-210ENST00000572476 PTPRTO14522 1441 aa23.1■■□□□ 1.29
SLC12A4-210ENST00000572476 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
SLC12A4-210ENST00000572476 ADGRL2O95490 1459 aa23.1■■□□□ 1.29
SLC12A4-210ENST00000572476 CEP170BQ9Y4F5 1589 aaPredicted RBP23.1■■□□□ 1.29
SLC12A4-210ENST00000572476 ZC3H13Q5T200 1668 aaKnown RBP23.09■■□□□ 1.29
SLC12A4-210ENST00000572476 CAMSAP1Q5T5Y3 1602 aa23.08■■□□□ 1.29
SLC12A4-210ENST00000572476 A2ML1A8K2U0 1454 aa23.07■■□□□ 1.28
SLC12A4-210ENST00000572476 TNRQ92752 1358 aa23.07■■□□□ 1.28
SLC12A4-210ENST00000572476 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
SLC12A4-210ENST00000572476 PLA2R1Q13018 1463 aa23.06■■□□□ 1.28
SLC12A4-210ENST00000572476 PRDM15P57071 1507 aaPredicted RBP23.06■■□□□ 1.28
SLC12A4-210ENST00000572476 DEPDC5O75140 1603 aa23.05■■□□□ 1.28
SLC12A4-210ENST00000572476 CHIC2Q9UKJ5 165 aa23.05■■□□□ 1.28
SLC12A4-210ENST00000572476 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
SLC12A4-210ENST00000572476 SPATA31D1Q6ZQQ2 1576 aa23.02■■□□□ 1.28
SLC12A4-210ENST00000572476 FBXO41Q8TF61 875 aa23.01■■□□□ 1.27
SLC12A4-210ENST00000572476 ARHGAP31Q2M1Z3 1444 aa23■■□□□ 1.27
SLC12A4-210ENST00000572476 CEP152O94986 1710 aa23■■□□□ 1.27
SLC12A4-210ENST00000572476 VWDEQ8N2E2 1590 aa23■■□□□ 1.27
SLC12A4-210ENST00000572476 NLRP1Q9C000 1473 aa22.99■■□□□ 1.27
SLC12A4-210ENST00000572476 PKD2Q13563 968 aa22.99■■□□□ 1.27
SLC12A4-210ENST00000572476 NCKAP5LQ9HCH0 1330 aa22.99■■□□□ 1.27
SLC12A4-210ENST00000572476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.99■■□□□ 1.27
SLC12A4-210ENST00000572476 ERVK-7P63135 1459 aa22.98■■□□□ 1.27
SLC12A4-210ENST00000572476 CERKQ8TCT0 537 aa22.97■■□□□ 1.27
SLC12A4-210ENST00000572476 LMTK2Q8IWU2 1503 aa22.97■■□□□ 1.27
SLC12A4-210ENST00000572476 ROCK1Q13464 1354 aa22.94■■□□□ 1.26
SLC12A4-210ENST00000572476 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
SLC12A4-210ENST00000572476 ANKRD50Q9ULJ7 1429 aa22.93■■□□□ 1.26
SLC12A4-210ENST00000572476 LTBP4Q8N2S1 1624 aa22.93■■□□□ 1.26
SLC12A4-210ENST00000572476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.91■■□□□ 1.264e-12■■■■□ 25.7
SLC12A4-210ENST00000572476 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
SLC12A4-210ENST00000572476 KANK1Q14678 1352 aa22.9■■□□□ 1.26
SLC12A4-210ENST00000572476 THEMISQ8N1K5 641 aaPredicted RBP22.9■■□□□ 1.26
SLC12A4-210ENST00000572476 NEURL4Q96JN8 1562 aa22.89■■□□□ 1.25
SLC12A4-210ENST00000572476 CFAP65Q6ZU64 1925 aaKnown RBP22.88■■□□□ 1.25
SLC12A4-210ENST00000572476 RRBP1Q9P2E9 1410 aaKnown RBP22.87■■□□□ 1.25
SLC12A4-210ENST00000572476 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
SLC12A4-210ENST00000572476 MED14O60244 1454 aa22.85■■□□□ 1.25
SLC12A4-210ENST00000572476 EFCAB6Q5THR3 1501 aa22.84■■□□□ 1.25
SLC12A4-210ENST00000572476 NOS1P29475 1434 aa22.83■■□□□ 1.25
SLC12A4-210ENST00000572476 ANKLE2Q86XL3 938 aa22.83■■□□□ 1.25
SLC12A4-210ENST00000572476 UBR1Q8IWV7 1749 aa22.82■■□□□ 1.24
SLC12A4-210ENST00000572476 UNC13BO14795 1591 aa22.82■■□□□ 1.24
SLC12A4-210ENST00000572476 ZNF335Q9H4Z2 1342 aaPredicted RBP22.81■■□□□ 1.24
SLC12A4-210ENST00000572476 IQSEC2Q5JU85 1478 aa22.79■■□□□ 1.24
SLC12A4-210ENST00000572476 SYNMO15061 1565 aa22.79■■□□□ 1.24
SLC12A4-210ENST00000572476 RPRD2Q5VT52 1461 aaKnown RBP22.79■■□□□ 1.24
SLC12A4-210ENST00000572476 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
SLC12A4-210ENST00000572476 SLIT1O75093 1534 aa22.77■■□□□ 1.24
SLC12A4-210ENST00000572476 TET3O43151 1660 aa22.77■■□□□ 1.24
SLC12A4-210ENST00000572476 IDI1Q13907 227 aa22.76■■□□□ 1.23
SLC12A4-210ENST00000572476 KDM5AP29375 1690 aaKnown RBP22.76■■□□□ 1.23
SLC12A4-210ENST00000572476 PIK3C2BO00750 1634 aa22.75■■□□□ 1.23
SLC12A4-210ENST00000572476 NPHP4O75161 1426 aaPredicted RBP22.75■■□□□ 1.23
SLC12A4-210ENST00000572476 ITGAEP38570 1179 aa22.74■■□□□ 1.23
SLC12A4-210ENST00000572476 IQGAP3Q86VI3 1631 aa22.72■■□□□ 1.23
SLC12A4-210ENST00000572476 GCC2Q8IWJ2 1684 aa22.72■■□□□ 1.23
SLC12A4-210ENST00000572476 LTKP29376 864 aa22.72■■□□□ 1.23
SLC12A4-210ENST00000572476 SLC52A1Q9NWF4 448 aa22.72■■□□□ 1.23
SLC12A4-210ENST00000572476 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
SLC12A4-210ENST00000572476 TMEM2Q9UHN6 1383 aa22.7■■□□□ 1.22
SLC12A4-210ENST00000572476 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
SLC12A4-210ENST00000572476 E9PCH4 1651 aa22.68■■□□□ 1.22
SLC12A4-210ENST00000572476 NUP155O75694 1391 aa22.67■■□□□ 1.22
SLC12A4-210ENST00000572476 NAIPQ13075 1403 aa22.66■■□□□ 1.22
SLC12A4-210ENST00000572476 TXNDC2Q86VQ3 553 aa22.66■■□□□ 1.22
SLC12A4-210ENST00000572476 ADGRB3O60242 1522 aa22.66■■□□□ 1.22
SLC12A4-210ENST00000572476 CPS1P31327 1500 aa22.66■■□□□ 1.22
SLC12A4-210ENST00000572476 STRCP1A6NGW2 1772 aa22.61■■□□□ 1.21
SLC12A4-210ENST00000572476 STAG3Q9UJ98 1225 aa22.61■■□□□ 1.21
SLC12A4-210ENST00000572476 EID1Q9Y6B2 187 aa22.61■■□□□ 1.21
SLC12A4-210ENST00000572476 HFM1A2PYH4 1435 aa22.6■■□□□ 1.21
SLC12A4-210ENST00000572476 TMEM131LA2VDJ0 1609 aa22.6■■□□□ 1.21
SLC12A4-210ENST00000572476 ZFYVE9O95405 1425 aa22.58■■□□□ 1.21
SLC12A4-210ENST00000572476 MYO5BQ9ULV0 1848 aa22.55■■□□□ 1.2
SLC12A4-210ENST00000572476 LRRC7Q96NW7 1537 aa22.53■■□□□ 1.2
SLC12A4-210ENST00000572476 UBAP1LF5GYI3 381 aa22.52■■□□□ 1.2
SLC12A4-210ENST00000572476 RIMS2Q9UQ26 1411 aa22.5■■□□□ 1.19
SLC12A4-210ENST00000572476 ALKQ9UM73 1620 aa22.49■■□□□ 1.19
SLC12A4-210ENST00000572476 PLEKHG1Q9ULL1 1385 aa22.49■■□□□ 1.19
SLC12A4-210ENST00000572476 SPHKAPQ2M3C7 1700 aa22.48■■□□□ 1.19
SLC12A4-210ENST00000572476 HDGFP51858 240 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms