RNA–Protein interactions for RNA: ENST00000572429.5

USP6-203, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 5

Gene USP6, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-203ENST00000572429 CFDP1Q9UEE9 299 aaPredicted RBP23.35■■□□□ 1.33
USP6-203ENST00000572429 TNRQ92752 1358 aa23.35■■□□□ 1.33
USP6-203ENST00000572429 ANKLE2Q86XL3 938 aa23.34■■□□□ 1.33
USP6-203ENST00000572429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.32■■□□□ 1.32
USP6-203ENST00000572429 FYCO1Q9BQS8 1478 aa23.31■■□□□ 1.32
USP6-203ENST00000572429 MED14O60244 1454 aa23.3■■□□□ 1.32
USP6-203ENST00000572429 PZPP20742 1482 aa23.3■■□□□ 1.32
USP6-203ENST00000572429 NPHP4O75161 1426 aaPredicted RBP23.29■■□□□ 1.32
USP6-203ENST00000572429 RGS17Q9UGC6 210 aaPredicted RBP23.29■■□□□ 1.32
USP6-203ENST00000572429 THEMISQ8N1K5 641 aaPredicted RBP23.28■■□□□ 1.32
USP6-203ENST00000572429 DHX29Q7Z478 1369 aaKnown RBP23.27■■□□□ 1.32
USP6-203ENST00000572429 CCNB3Q8WWL7 1395 aa23.27■■□□□ 1.32
USP6-203ENST00000572429 DEPDC5O75140 1603 aa23.26■■□□□ 1.31
USP6-203ENST00000572429 RTEL1-TNFRSF6BF6WH68 1400 aa23.26■■□□□ 1.31
USP6-203ENST00000572429 MBD5Q9P267 1494 aa23.26■■□□□ 1.31
USP6-203ENST00000572429 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
USP6-203ENST00000572429 ZNF644Q9H582 1327 aaPredicted RBP23.25■■□□□ 1.31
USP6-203ENST00000572429 LRRC7Q96NW7 1537 aa23.24■■□□□ 1.31
USP6-203ENST00000572429 MIA2Q96PC5 1412 aa23.24■■□□□ 1.31
USP6-203ENST00000572429 STRCP1A6NGW2 1772 aa23.23■■□□□ 1.31
USP6-203ENST00000572429 KIF3BO15066 747 aa23.23■■□□□ 1.31
USP6-203ENST00000572429 NLRP1Q9C000 1473 aa23.23■■□□□ 1.31
USP6-203ENST00000572429 KDM5DQ9BY66 1539 aa23.23■■□□□ 1.31
USP6-203ENST00000572429 FAM135AQ9P2D6 1515 aa23.23■■□□□ 1.31
USP6-203ENST00000572429 UGGT1Q9NYU2 1555 aa23.23■■□□□ 1.31
USP6-203ENST00000572429 IQGAP1P46940 1657 aa23.2■■□□□ 1.3
USP6-203ENST00000572429 RNF17Q9BXT8 1623 aaKnown RBP23.19■■□□□ 1.3
USP6-203ENST00000572429 WASHC2CQ9Y4E1 1318 aa23.19■■□□□ 1.3
USP6-203ENST00000572429 SYNMO15061 1565 aa23.16■■□□□ 1.3
USP6-203ENST00000572429 TIAM1Q13009 1591 aa23.14■■□□□ 1.3
USP6-203ENST00000572429 MTUS2Q5JR59 1369 aa23.14■■□□□ 1.29
USP6-203ENST00000572429 POTEAQ6S8J7 498 aa23.1■■□□□ 1.29
USP6-203ENST00000572429 ZC3H13Q5T200 1668 aaKnown RBP23.09■■□□□ 1.29
USP6-203ENST00000572429 CCDC141Q6ZP82 1450 aa23.07■■□□□ 1.28
USP6-203ENST00000572429 FAM135BQ49AJ0 1406 aa23.03■■□□□ 1.28
USP6-203ENST00000572429 RSPH4AQ5TD94 716 aa23.03■■□□□ 1.28
USP6-203ENST00000572429 XIRP1Q702N8 1843 aaKnown RBP23.03■■□□□ 1.28
USP6-203ENST00000572429 CEP162Q5TB80 1403 aa23.02■■□□□ 1.28
USP6-203ENST00000572429 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
USP6-203ENST00000572429 EHBP1L1Q8N3D4 1523 aa23.02■■□□□ 1.28
USP6-203ENST00000572429 ERVK-7P63135 1459 aa23.01■■□□□ 1.27
USP6-203ENST00000572429 SCAF11Q99590 1463 aaKnown RBP23■■□□□ 1.27
USP6-203ENST00000572429 ABCC3O15438 1527 aa23■■□□□ 1.27
USP6-203ENST00000572429 LTKP29376 864 aa22.99■■□□□ 1.27
USP6-203ENST00000572429 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
USP6-203ENST00000572429 CAMSAP2Q08AD1 1489 aa22.98■■□□□ 1.27
USP6-203ENST00000572429 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
USP6-203ENST00000572429 ARHGAP23Q9P227 1491 aa22.96■■□□□ 1.27
USP6-203ENST00000572429 SLIT1O75093 1534 aa22.95■■□□□ 1.26
USP6-203ENST00000572429 TXNDC2Q86VQ3 553 aa22.95■■□□□ 1.26
USP6-203ENST00000572429 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
USP6-203ENST00000572429 TSPY4P0CV99 314 aa22.92■■□□□ 1.26
USP6-203ENST00000572429 TSPY10P0CW01 314 aa22.92■■□□□ 1.26
USP6-203ENST00000572429 SETD1AO15047 1707 aaKnown RBP22.91■■□□□ 1.26
USP6-203ENST00000572429 MROH1Q8NDA8 1641 aa22.9■■□□□ 1.26
USP6-203ENST00000572429 TMEM94Q12767 1356 aa22.89■■□□□ 1.25
USP6-203ENST00000572429 ROBO1Q9Y6N7 1651 aa22.88■■□□□ 1.25
USP6-203ENST00000572429 CFAP65Q6ZU64 1925 aaKnown RBP22.86■■□□□ 1.25
USP6-203ENST00000572429 EIF2AK4Q9P2K8 1649 aaKnown RBP22.86■■□□□ 1.25
USP6-203ENST00000572429 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
USP6-203ENST00000572429 CEP152O94986 1710 aa22.85■■□□□ 1.25
USP6-203ENST00000572429 MAP3K1Q13233 1512 aa22.84■■□□□ 1.25
USP6-203ENST00000572429 MAST1Q9Y2H9 1570 aa22.84■■□□□ 1.25
USP6-203ENST00000572429 KCNA6P17658 529 aa22.83■■□□□ 1.25
USP6-203ENST00000572429 TMEM2Q9UHN6 1383 aa22.82■■□□□ 1.24
USP6-203ENST00000572429 ARHGAP31Q2M1Z3 1444 aa22.81■■□□□ 1.24
USP6-203ENST00000572429 RBM33Q96EV2 1170 aaKnown RBP22.8■■□□□ 1.24
USP6-203ENST00000572429 LRRC9Q6ZRR7 1453 aa22.79■■□□□ 1.24
USP6-203ENST00000572429 PROSER2Q86WR7 435 aaPredicted RBP22.79■■□□□ 1.24
USP6-203ENST00000572429 UPF1Q92900 1129 aaKnown RBP eCLIP22.79■■□□□ 1.24
USP6-203ENST00000572429 PIK3C2BO00750 1634 aa22.78■■□□□ 1.24
USP6-203ENST00000572429 JCADQ9P266 1359 aa22.77■■□□□ 1.24
USP6-203ENST00000572429 TET3O43151 1660 aa22.76■■□□□ 1.23
USP6-203ENST00000572429 PRDM15P57071 1507 aaPredicted RBP22.76■■□□□ 1.23
USP6-203ENST00000572429 PHLPP1O60346 1717 aa22.74■■□□□ 1.23
USP6-203ENST00000572429 SLC26A8Q96RN1 970 aa22.74■■□□□ 1.23
USP6-203ENST00000572429 SLAIN2Q9P270 581 aa22.73■■□□□ 1.23
USP6-203ENST00000572429 NKTRP30414 1462 aaKnown RBP22.72■■□□□ 1.23
USP6-203ENST00000572429 DUOX2Q9NRD8 1548 aa22.72■■□□□ 1.23
USP6-203ENST00000572429 STAG3Q9UJ98 1225 aa22.71■■□□□ 1.23
USP6-203ENST00000572429 EFCAB6Q5THR3 1501 aa22.71■■□□□ 1.23
USP6-203ENST00000572429 NWD1Q149M9 1564 aa22.71■■□□□ 1.23
USP6-203ENST00000572429 MSH6P52701 1360 aa22.7■■□□□ 1.22
USP6-203ENST00000572429 KDM5AP29375 1690 aaKnown RBP22.7■■□□□ 1.22
USP6-203ENST00000572429 LRP6O75581 1613 aa22.69■■□□□ 1.22
USP6-203ENST00000572429 IDI1Q13907 227 aa22.69■■□□□ 1.22
USP6-203ENST00000572429 COL16A1Q07092 1604 aaPredicted RBP22.68■■□□□ 1.22
USP6-203ENST00000572429 ZNF772Q68DY9 489 aaPredicted RBP22.67■■□□□ 1.22
USP6-203ENST00000572429 TRIM52Q96A61 297 aa22.67■■□□□ 1.22
USP6-203ENST00000572429 SPATA31A6Q5VVP1 1343 aa22.66■■□□□ 1.22
USP6-203ENST00000572429 FGD6Q6ZV73 1430 aa22.64■■□□□ 1.21
USP6-203ENST00000572429 ERBINQ96RT1 1412 aa22.63■■□□□ 1.21
USP6-203ENST00000572429 KIF15Q9NS87 1388 aa22.63■■□□□ 1.21
USP6-203ENST00000572429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.62■■□□□ 1.21
USP6-203ENST00000572429 MYOM3Q5VTT5 1437 aa22.61■■□□□ 1.21
USP6-203ENST00000572429 MEX3CQ5U5Q3 659 aaKnown RBP22.6■■□□□ 1.21
USP6-203ENST00000572429 RXRBP28702 533 aa22.58■■□□□ 1.21
USP6-203ENST00000572429 RRP7BPQ9NSQ0 103 aa22.58■■□□□ 1.21
USP6-203ENST00000572429 NOS1P29475 1434 aa22.57■■□□□ 1.2
USP6-203ENST00000572429 ADGRB3O60242 1522 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms