RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
TVP23A-205ENST00000572428 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
TVP23A-205ENST00000572428 CCER1Q8TC90 406 aaPredicted RBP12.63□□□□□ -0.39
TVP23A-205ENST00000572428 ABCC5O15440 1437 aa12.62□□□□□ -0.39
TVP23A-205ENST00000572428 HSP90B1P14625 803 aaKnown RBP12.62□□□□□ -0.39
TVP23A-205ENST00000572428 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
TVP23A-205ENST00000572428 CLSPNQ9HAW4 1339 aa12.61□□□□□ -0.39
TVP23A-205ENST00000572428 ROCK1Q13464 1354 aa12.61□□□□□ -0.39
TVP23A-205ENST00000572428 SYCP2Q9BX26 1530 aa12.6□□□□□ -0.39
TVP23A-205ENST00000572428 PLXNC1O60486 1568 aa12.6□□□□□ -0.39
TVP23A-205ENST00000572428 ARHGEF12Q9NZN5 1544 aa12.6□□□□□ -0.39
TVP23A-205ENST00000572428 NEO1Q92859 1461 aa12.6□□□□□ -0.39
TVP23A-205ENST00000572428 FANCAO15360 1455 aa12.59□□□□□ -0.39
TVP23A-205ENST00000572428 HFM1A2PYH4 1435 aa12.59□□□□□ -0.39
TVP23A-205ENST00000572428 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
TVP23A-205ENST00000572428 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
TVP23A-205ENST00000572428 KCNH8Q96L42 1107 aa12.58□□□□□ -0.4
TVP23A-205ENST00000572428 CD109Q6YHK3 1445 aa12.58□□□□□ -0.4
TVP23A-205ENST00000572428 BRPF3Q9ULD4 1205 aa12.58□□□□□ -0.4
TVP23A-205ENST00000572428 ZNF644Q9H582 1327 aaPredicted RBP12.58□□□□□ -0.4
TVP23A-205ENST00000572428 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
TVP23A-205ENST00000572428 INO80Q9ULG1 1556 aaPredicted RBP12.57□□□□□ -0.4
TVP23A-205ENST00000572428 POLR3GLQ9BT43 218 aa12.57□□□□□ -0.4
TVP23A-205ENST00000572428 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
TVP23A-205ENST00000572428 KDM5CP41229 1560 aa12.57□□□□□ -0.4
TVP23A-205ENST00000572428 EFCAB2Q5VUJ9 269 aa12.56□□□□□ -0.4
TVP23A-205ENST00000572428 NAIPQ13075 1403 aa12.55□□□□□ -0.4
TVP23A-205ENST00000572428 NPM3O75607 178 aaKnown RBP12.54□□□□□ -0.4
TVP23A-205ENST00000572428 BCCIPQ9P287 314 aaKnown RBP eCLIP12.54□□□□□ -0.4
TVP23A-205ENST00000572428 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
TVP23A-205ENST00000572428 RTEL1-TNFRSF6BF6WH68 1400 aa12.53□□□□□ -0.4
TVP23A-205ENST00000572428 TSPOAP1O95153 1857 aa12.53□□□□□ -0.4
TVP23A-205ENST00000572428 NCOA1Q15788 1441 aa12.53□□□□□ -0.4
TVP23A-205ENST00000572428 ZFYVE16Q7Z3T8 1539 aa12.53□□□□□ -0.4
TVP23A-205ENST00000572428 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
TVP23A-205ENST00000572428 C9orf84Q5VXU9 1444 aa12.52□□□□□ -0.4
TVP23A-205ENST00000572428 KIDINS220Q9ULH0 1771 aa12.52□□□□□ -0.41
TVP23A-205ENST00000572428 TEX14Q8IWB6 1497 aa12.52□□□□□ -0.41
TVP23A-205ENST00000572428 FRMPD1Q5SYB0 1578 aa12.51□□□□□ -0.41
TVP23A-205ENST00000572428 BCORL1Q5H9F3 1711 aa12.51□□□□□ -0.41
TVP23A-205ENST00000572428 KDM6BO15054 1643 aa12.51□□□□□ -0.41
TVP23A-205ENST00000572428 ZMYM4Q5VZL5 1548 aa12.5□□□□□ -0.41
TVP23A-205ENST00000572428 TRAPPC8Q9Y2L5 1435 aa12.5□□□□□ -0.41
TVP23A-205ENST00000572428 ZNF518AQ6AHZ1 1483 aa12.5□□□□□ -0.41
TVP23A-205ENST00000572428 ZNF428Q96B54 188 aa12.5□□□□□ -0.41
TVP23A-205ENST00000572428 POGZQ7Z3K3 1410 aa12.49□□□□□ -0.41
TVP23A-205ENST00000572428 EIF2AK4Q9P2K8 1649 aaKnown RBP12.49□□□□□ -0.41
TVP23A-205ENST00000572428 RAB3GAP2Q9H2M9 1393 aa12.49□□□□□ -0.41
TVP23A-205ENST00000572428 HECW2Q9P2P5 1572 aa12.49□□□□□ -0.41
TVP23A-205ENST00000572428 ATP7AQ04656 1500 aa12.49□□□□□ -0.41
TVP23A-205ENST00000572428 ZNF326Q5BKZ1 582 aaKnown RBP12.49□□□□□ -0.41
TVP23A-205ENST00000572428 MLH3Q9UHC1 1453 aa12.48□□□□□ -0.41
TVP23A-205ENST00000572428 ZNF777Q9ULD5 760 aaPredicted RBP12.48□□□□□ -0.41
TVP23A-205ENST00000572428 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
TVP23A-205ENST00000572428 SCAPERQ9BY12 1400 aa12.47□□□□□ -0.41
TVP23A-205ENST00000572428 HNRNPMP52272 730 aaKnown RBP eCLIP12.47□□□□□ -0.41
TVP23A-205ENST00000572428 DUOX2Q9NRD8 1548 aa12.47□□□□□ -0.41
TVP23A-205ENST00000572428 UNC13BO14795 1591 aa12.47□□□□□ -0.41
TVP23A-205ENST00000572428 KDM5DQ9BY66 1539 aa12.47□□□□□ -0.41
TVP23A-205ENST00000572428 DEPDC5O75140 1603 aa12.47□□□□□ -0.41
TVP23A-205ENST00000572428 NAP1L2Q9ULW6 460 aaPredicted RBP12.47□□□□□ -0.41
TVP23A-205ENST00000572428 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.41
TVP23A-205ENST00000572428 FAM69CQ0P6D2 419 aa12.46□□□□□ -0.42
TVP23A-205ENST00000572428 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
TVP23A-205ENST00000572428 DENND4BO75064 1496 aaPredicted RBP12.44□□□□□ -0.42
TVP23A-205ENST00000572428 MAGI2Q86UL8 1455 aa12.44□□□□□ -0.42
TVP23A-205ENST00000572428 ITGAEP38570 1179 aa12.44□□□□□ -0.42
TVP23A-205ENST00000572428 ERBINQ96RT1 1412 aa12.44□□□□□ -0.42
TVP23A-205ENST00000572428 MYT1LQ9UL68 1186 aa12.44□□□□□ -0.42
TVP23A-205ENST00000572428 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
TVP23A-205ENST00000572428 ABCA6Q8N139 1617 aa12.44□□□□□ -0.42
TVP23A-205ENST00000572428 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
TVP23A-205ENST00000572428 TSPY4P0CV99 314 aa12.43□□□□□ -0.42
TVP23A-205ENST00000572428 TSPY10P0CW01 314 aa12.43□□□□□ -0.42
TVP23A-205ENST00000572428 DHX57Q6P158 1386 aaKnown RBP12.42□□□□□ -0.42
TVP23A-205ENST00000572428 DIP2CQ9Y2E4 1556 aa12.41□□□□□ -0.42
TVP23A-205ENST00000572428 RNF17Q9BXT8 1623 aaKnown RBP12.41□□□□□ -0.42
TVP23A-205ENST00000572428 CCDC9Q9Y3X0 531 aaKnown RBP12.41□□□□□ -0.42
TVP23A-205ENST00000572428 KIF15Q9NS87 1388 aa12.41□□□□□ -0.42
TVP23A-205ENST00000572428 ANKRD50Q9ULJ7 1429 aa12.41□□□□□ -0.42
TVP23A-205ENST00000572428 IQGAP3Q86VI3 1631 aa12.41□□□□□ -0.42
TVP23A-205ENST00000572428 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.43
TVP23A-205ENST00000572428 CHIC2Q9UKJ5 165 aa12.4□□□□□ -0.43
TVP23A-205ENST00000572428 VWDEQ8N2E2 1590 aa12.39□□□□□ -0.43
TVP23A-205ENST00000572428 CNPY4Q8N129 248 aa12.39□□□□□ -0.43
TVP23A-205ENST00000572428 NECTIN2Q92692 538 aa12.39□□□□□ -0.43
TVP23A-205ENST00000572428 RRP7BPQ9NSQ0 103 aa12.38□□□□□ -0.43
TVP23A-205ENST00000572428 MROH1Q8NDA8 1641 aa12.38□□□□□ -0.43
TVP23A-205ENST00000572428 SPAG9O60271 1321 aaKnown RBP12.38□□□□□ -0.43
TVP23A-205ENST00000572428 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
TVP23A-205ENST00000572428 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
TVP23A-205ENST00000572428 PZPP20742 1482 aa12.36□□□□□ -0.43
TVP23A-205ENST00000572428 COL17A1Q9UMD9 1497 aaPredicted RBP12.36□□□□□ -0.43
TVP23A-205ENST00000572428 ARHGEF40Q8TER5 1519 aa12.36□□□□□ -0.43
TVP23A-205ENST00000572428 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
TVP23A-205ENST00000572428 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
TVP23A-205ENST00000572428 A2MP01023 1474 aa12.34□□□□□ -0.43
TVP23A-205ENST00000572428 ZNF592Q92610 1267 aa12.34□□□□□ -0.43
TVP23A-205ENST00000572428 SECISBP2LQ93073 1101 aaKnown RBP12.34□□□□□ -0.43
TVP23A-205ENST00000572428 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms