RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 REREQ9P2R6 1566 aa14.1□□□□□ -0.15
NPLOC4-208ENST00000572351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.151e-7■□□□□ 8.1
NPLOC4-208ENST00000572351 ESF1Q9H501 851 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-208ENST00000572351 SETD5Q9C0A6 1442 aa14.08□□□□□ -0.15
NPLOC4-208ENST00000572351 AGLP35573 1532 aa14.08□□□□□ -0.16
NPLOC4-208ENST00000572351 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
NPLOC4-208ENST00000572351 KANK1Q14678 1352 aa14.05□□□□□ -0.16
NPLOC4-208ENST00000572351 RAB3GAP2Q9H2M9 1393 aa14.05□□□□□ -0.16
NPLOC4-208ENST00000572351 WASHC2CQ9Y4E1 1318 aa14.03□□□□□ -0.16
NPLOC4-208ENST00000572351 EIF2AK4Q9P2K8 1649 aaKnown RBP14.02□□□□□ -0.16
NPLOC4-208ENST00000572351 NUP155O75694 1391 aa14.02□□□□□ -0.17
NPLOC4-208ENST00000572351 ACIN1Q9UKV3 1341 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-208ENST00000572351 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
NPLOC4-208ENST00000572351 SIGLEC1Q9BZZ2 1709 aa13.99□□□□□ -0.17
NPLOC4-208ENST00000572351 HRCP23327 699 aa13.98□□□□□ -0.17
NPLOC4-208ENST00000572351 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
NPLOC4-208ENST00000572351 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
NPLOC4-208ENST00000572351 PRDM15P57071 1507 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-208ENST00000572351 KDM5DQ9BY66 1539 aa13.96□□□□□ -0.17
NPLOC4-208ENST00000572351 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
NPLOC4-208ENST00000572351 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
NPLOC4-208ENST00000572351 UNC13BO14795 1591 aa13.95□□□□□ -0.18
NPLOC4-208ENST00000572351 ABCC3O15438 1527 aa13.95□□□□□ -0.18
NPLOC4-208ENST00000572351 KDM4FA0A1W2PPD8 638 aa13.94□□□□□ -0.18
NPLOC4-208ENST00000572351 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
NPLOC4-208ENST00000572351 DEPDC5O75140 1603 aa13.93□□□□□ -0.18
NPLOC4-208ENST00000572351 MROH1Q8NDA8 1641 aa13.93□□□□□ -0.18
NPLOC4-208ENST00000572351 MPHOSPH9Q99550 1183 aa13.93□□□□□ -0.18
NPLOC4-208ENST00000572351 ZMYM3Q14202 1370 aa13.93□□□□□ -0.18
NPLOC4-208ENST00000572351 MADDQ8WXG6 1647 aa13.92□□□□□ -0.18
NPLOC4-208ENST00000572351 CEBPAP49715 358 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-208ENST00000572351 PKD2Q13563 968 aa13.91□□□□□ -0.18
NPLOC4-208ENST00000572351 LMTK2Q8IWU2 1503 aa13.9□□□□□ -0.18
NPLOC4-208ENST00000572351 VWDEQ8N2E2 1590 aa13.9□□□□□ -0.18
NPLOC4-208ENST00000572351 ADAMTSL3P82987 1691 aa13.9□□□□□ -0.18
NPLOC4-208ENST00000572351 PZPP20742 1482 aa13.89□□□□□ -0.19
NPLOC4-208ENST00000572351 IQGAP3Q86VI3 1631 aa13.89□□□□□ -0.19
NPLOC4-208ENST00000572351 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-208ENST00000572351 PTPRMP28827 1452 aa13.88□□□□□ -0.19
NPLOC4-208ENST00000572351 CLTCQ00610 1675 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-208ENST00000572351 FER1L4A9Z1Z3 1794 aa13.87□□□□□ -0.19
NPLOC4-208ENST00000572351 EFCAB6Q5THR3 1501 aa13.87□□□□□ -0.19
NPLOC4-208ENST00000572351 NPATQ14207 1427 aa13.87□□□□□ -0.19
NPLOC4-208ENST00000572351 ARHGAP31Q2M1Z3 1444 aa13.87□□□□□ -0.19
NPLOC4-208ENST00000572351 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
NPLOC4-208ENST00000572351 FBXO31Q5XUX0 539 aaPredicted RBP13.86□□□□□ -0.19
NPLOC4-208ENST00000572351 RPRD2Q5VT52 1461 aaKnown RBP13.86□□□□□ -0.19
NPLOC4-208ENST00000572351 CAMSAP1Q5T5Y3 1602 aa13.85□□□□□ -0.19
NPLOC4-208ENST00000572351 TET3O43151 1660 aa13.84□□□□□ -0.19
NPLOC4-208ENST00000572351 CEP152O94986 1710 aa13.84□□□□□ -0.19
NPLOC4-208ENST00000572351 TNRQ92752 1358 aa13.83□□□□□ -0.19
NPLOC4-208ENST00000572351 ERVK-7P63135 1459 aa13.82□□□□□ -0.2
NPLOC4-208ENST00000572351 DHX57Q6P158 1386 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-208ENST00000572351 MROH2AA6NES4 1674 aa13.82□□□□□ -0.2
NPLOC4-208ENST00000572351 MSH5O43196 834 aa13.8□□□□□ -0.2
NPLOC4-208ENST00000572351 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-208ENST00000572351 SLC52A1Q9NWF4 448 aa13.8□□□□□ -0.2
NPLOC4-208ENST00000572351 NOS1P29475 1434 aa13.8□□□□□ -0.2
NPLOC4-208ENST00000572351 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
NPLOC4-208ENST00000572351 CHGAP10645 457 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-208ENST00000572351 SPATA31D1Q6ZQQ2 1576 aa13.78□□□□□ -0.2
NPLOC4-208ENST00000572351 C3P01024 1663 aa13.78□□□□□ -0.2
NPLOC4-208ENST00000572351 CCDC144AA2RUR9 1427 aa13.77□□□□□ -0.21
NPLOC4-208ENST00000572351 E9PCH4 1651 aa13.77□□□□□ -0.21
NPLOC4-208ENST00000572351 PTPRTO14522 1441 aa13.77□□□□□ -0.21
NPLOC4-208ENST00000572351 UHRF1BP1Q6BDS2 1440 aa13.76□□□□□ -0.21
NPLOC4-208ENST00000572351 ANKRD30BQ9BXX2 1392 aa13.75□□□□□ -0.21
NPLOC4-208ENST00000572351 IDI1Q13907 227 aa13.75□□□□□ -0.21
NPLOC4-208ENST00000572351 TRPM2O94759 1503 aa13.74□□□□□ -0.21
NPLOC4-208ENST00000572351 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
NPLOC4-208ENST00000572351 NLRP1Q9C000 1473 aa13.74□□□□□ -0.21
NPLOC4-208ENST00000572351 PREX1Q8TCU6 1659 aa13.73□□□□□ -0.21
NPLOC4-208ENST00000572351 SYNMO15061 1565 aa13.72□□□□□ -0.21
NPLOC4-208ENST00000572351 UGGT1Q9NYU2 1555 aa13.72□□□□□ -0.21
NPLOC4-208ENST00000572351 NEUROD1Q13562 356 aa13.72□□□□□ -0.21
NPLOC4-208ENST00000572351 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-208ENST00000572351 A2ML1A8K2U0 1454 aa13.71□□□□□ -0.21
NPLOC4-208ENST00000572351 THEMISQ8N1K5 641 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-208ENST00000572351 SIN3AQ96ST3 1273 aa13.7□□□□□ -0.22
NPLOC4-208ENST00000572351 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
NPLOC4-208ENST00000572351 MYO3AQ8NEV4 1616 aa13.69□□□□□ -0.22
NPLOC4-208ENST00000572351 RGL3Q3MIN7 710 aa13.69□□□□□ -0.22
NPLOC4-208ENST00000572351 SPHKAPQ2M3C7 1700 aa13.69□□□□□ -0.22
NPLOC4-208ENST00000572351 CEP170BQ9Y4F5 1589 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-208ENST00000572351 HSPA2P54652 639 aa13.67□□□□□ -0.22
NPLOC4-208ENST00000572351 ADGRB3O60242 1522 aa13.67□□□□□ -0.22
NPLOC4-208ENST00000572351 CLTCL1P53675 1640 aa13.67□□□□□ -0.22
NPLOC4-208ENST00000572351 HDGFP51858 240 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-208ENST00000572351 PIK3C2BO00750 1634 aa13.65□□□□□ -0.22
NPLOC4-208ENST00000572351 PPP1R15AO75807 674 aaPredicted RBP13.65□□□□□ -0.22
NPLOC4-208ENST00000572351 EID1Q9Y6B2 187 aa13.65□□□□□ -0.22
NPLOC4-208ENST00000572351 LMTK3Q96Q04 1460 aa13.65□□□□□ -0.22
NPLOC4-208ENST00000572351 TONSLQ96HA7 1378 aa13.64□□□□□ -0.23
NPLOC4-208ENST00000572351 TMEM2Q9UHN6 1383 aa13.64□□□□□ -0.23
NPLOC4-208ENST00000572351 NUTM2DQ5VT03 806 aaPredicted RBP13.63□□□□□ -0.23
NPLOC4-208ENST00000572351 TXNDC2Q86VQ3 553 aa13.63□□□□□ -0.23
NPLOC4-208ENST00000572351 ANKLE2Q86XL3 938 aa13.63□□□□□ -0.23
NPLOC4-208ENST00000572351 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.23
NPLOC4-208ENST00000572351 SPATA31E1Q6ZUB1 1445 aa13.63□□□□□ -0.23
NPLOC4-208ENST00000572351 RPGRIP1LQ68CZ1 1315 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms