RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 CAMSAP1Q5T5Y3 1602 aa27.23■■□□□ 1.95
LITAF-211ENST00000572255 KDM5DQ9BY66 1539 aa27.23■■□□□ 1.95
LITAF-211ENST00000572255 FAM135AQ9P2D6 1515 aa27.23■■□□□ 1.95
LITAF-211ENST00000572255 CEP170BQ9Y4F5 1589 aaPredicted RBP27.21■■□□□ 1.95
LITAF-211ENST00000572255 WASHC2CQ9Y4E1 1318 aa27.16■■□□□ 1.94
LITAF-211ENST00000572255 PTPN23Q9H3S7 1636 aa27.16■■□□□ 1.94
LITAF-211ENST00000572255 RNF17Q9BXT8 1623 aaKnown RBP27.16■■□□□ 1.94
LITAF-211ENST00000572255 PZPP20742 1482 aa27.15■■□□□ 1.94
LITAF-211ENST00000572255 EIF2AK4Q9P2K8 1649 aaKnown RBP27.14■■□□□ 1.94
LITAF-211ENST00000572255 CROCC2H7BZ55 1655 aa27.13■■□□□ 1.93
LITAF-211ENST00000572255 A2ML1A8K2U0 1454 aa27.13■■□□□ 1.93
LITAF-211ENST00000572255 PLA2R1Q13018 1463 aa27.13■■□□□ 1.93
LITAF-211ENST00000572255 FBXO31Q5XUX0 539 aaPredicted RBP27.12■■□□□ 1.93
LITAF-211ENST00000572255 NCKAP5LQ9HCH0 1330 aa27.11■■□□□ 1.93
LITAF-211ENST00000572255 TNRQ92752 1358 aa27.1■■□□□ 1.93
LITAF-211ENST00000572255 FGD6Q6ZV73 1430 aa27.1■■□□□ 1.93
LITAF-211ENST00000572255 SHANK2Q9UPX8 1470 aa27.1■■□□□ 1.93
LITAF-211ENST00000572255 DNMT1P26358 1616 aaKnown RBP27.09■■□□□ 1.93
LITAF-211ENST00000572255 ABCC5O15440 1437 aa27.09■■□□□ 1.93
LITAF-211ENST00000572255 DUOX2Q9NRD8 1548 aa27.09■■□□□ 1.93
LITAF-211ENST00000572255 ZC3H13Q5T200 1668 aaKnown RBP27.08■■□□□ 1.93
LITAF-211ENST00000572255 TCOF1Q13428 1488 aaKnown RBP27.08■■□□□ 1.93
LITAF-211ENST00000572255 ABCC3O15438 1527 aa27.07■■□□□ 1.92
LITAF-211ENST00000572255 MROH1Q8NDA8 1641 aa27.07■■□□□ 1.92
LITAF-211ENST00000572255 LTBP4Q8N2S1 1624 aa27.06■■□□□ 1.92
LITAF-211ENST00000572255 PKD2Q13563 968 aa27.06■■□□□ 1.92
LITAF-211ENST00000572255 KIF15Q9NS87 1388 aa27.05■■□□□ 1.92
LITAF-211ENST00000572255 DAPK1P53355 1430 aa27.05■■□□□ 1.92
LITAF-211ENST00000572255 CEP152O94986 1710 aa27.02■■□□□ 1.92
LITAF-211ENST00000572255 RRP7BPQ9NSQ0 103 aa27■■□□□ 1.91
LITAF-211ENST00000572255 NLRP1Q9C000 1473 aa27■■□□□ 1.91
LITAF-211ENST00000572255 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
LITAF-211ENST00000572255 POLR1AO95602 1720 aaPredicted RBP26.98■■□□□ 1.91
LITAF-211ENST00000572255 SPATA31D1Q6ZQQ2 1576 aa26.97■■□□□ 1.91
LITAF-211ENST00000572255 PRDM15P57071 1507 aaPredicted RBP26.96■■□□□ 1.91
LITAF-211ENST00000572255 ERVK-7P63135 1459 aa26.94■■□□□ 1.9
LITAF-211ENST00000572255 ZNF335Q9H4Z2 1342 aaPredicted RBP26.94■■□□□ 1.9
LITAF-211ENST00000572255 IQSEC2Q5JU85 1478 aa26.93■■□□□ 1.9
LITAF-211ENST00000572255 UGGT1Q9NYU2 1555 aa26.93■■□□□ 1.9
LITAF-211ENST00000572255 ANKRD30AQ9BXX3 1397 aa26.93■■□□□ 1.9
LITAF-211ENST00000572255 NEURL4Q96JN8 1562 aa26.92■■□□□ 1.9
LITAF-211ENST00000572255 DEPDC5O75140 1603 aa26.92■■□□□ 1.9
LITAF-211ENST00000572255 CHIC2Q9UKJ5 165 aa26.92■■□□□ 1.9
LITAF-211ENST00000572255 CFAP65Q6ZU64 1925 aaKnown RBP26.91■■□□□ 1.9
LITAF-211ENST00000572255 THEMISQ8N1K5 641 aaPredicted RBP26.91■■□□□ 1.9
LITAF-211ENST00000572255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.91■■□□□ 1.9
LITAF-211ENST00000572255 FAM50AQ14320 339 aaKnown RBP26.87■■□□□ 1.89
LITAF-211ENST00000572255 ANKLE2Q86XL3 938 aa26.87■■□□□ 1.89
LITAF-211ENST00000572255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.87■■□□□ 1.89
LITAF-211ENST00000572255 ARHGAP31Q2M1Z3 1444 aa26.86■■□□□ 1.89
LITAF-211ENST00000572255 ADGRL2O95490 1459 aa26.86■■□□□ 1.89
LITAF-211ENST00000572255 KANK1Q14678 1352 aa26.84■■□□□ 1.89
LITAF-211ENST00000572255 UBR1Q8IWV7 1749 aa26.81■■□□□ 1.88
LITAF-211ENST00000572255 MED14O60244 1454 aa26.81■■□□□ 1.88
LITAF-211ENST00000572255 VWDEQ8N2E2 1590 aa26.8■■□□□ 1.88
LITAF-211ENST00000572255 NPHP4O75161 1426 aaPredicted RBP26.8■■□□□ 1.88
LITAF-211ENST00000572255 LMTK2Q8IWU2 1503 aa26.79■■□□□ 1.88
LITAF-211ENST00000572255 IQGAP1P46940 1657 aa26.76■■□□□ 1.87
LITAF-211ENST00000572255 CPS1P31327 1500 aa26.74■■□□□ 1.87
LITAF-211ENST00000572255 ANKRD50Q9ULJ7 1429 aa26.73■■□□□ 1.87
LITAF-211ENST00000572255 EFCAB6Q5THR3 1501 aa26.72■■□□□ 1.87
LITAF-211ENST00000572255 UBAP1LF5GYI3 381 aa26.72■■□□□ 1.87
LITAF-211ENST00000572255 PIK3C2BO00750 1634 aa26.72■■□□□ 1.87
LITAF-211ENST00000572255 ARHGAP23Q9P227 1491 aa26.69■■□□□ 1.86
LITAF-211ENST00000572255 SLIT1O75093 1534 aa26.69■■□□□ 1.86
LITAF-211ENST00000572255 SCAF11Q99590 1463 aaKnown RBP26.68■■□□□ 1.86
LITAF-211ENST00000572255 SYNMO15061 1565 aa26.67■■□□□ 1.86
LITAF-211ENST00000572255 PPARGC1BQ86YN6 1023 aaKnown RBP26.65■■□□□ 1.86
LITAF-211ENST00000572255 NOS1P29475 1434 aa26.65■■□□□ 1.86
LITAF-211ENST00000572255 KDM5AP29375 1690 aaKnown RBP26.64■■□□□ 1.86
LITAF-211ENST00000572255 LTKP29376 864 aa26.64■■□□□ 1.86
LITAF-211ENST00000572255 TXNDC2Q86VQ3 553 aa26.63■■□□□ 1.85
LITAF-211ENST00000572255 UNC13BO14795 1591 aa26.63■■□□□ 1.85
LITAF-211ENST00000572255 ROCK1Q13464 1354 aa26.62■■□□□ 1.85
LITAF-211ENST00000572255 STRCP1A6NGW2 1772 aa26.62■■□□□ 1.85
LITAF-211ENST00000572255 IDI1Q13907 227 aa26.62■■□□□ 1.85
LITAF-211ENST00000572255 STAG3Q9UJ98 1225 aa26.62■■□□□ 1.85
LITAF-211ENST00000572255 TET3O43151 1660 aa26.61■■□□□ 1.85
LITAF-211ENST00000572255 TMEM2Q9UHN6 1383 aa26.6■■□□□ 1.85
LITAF-211ENST00000572255 EID1Q9Y6B2 187 aa26.6■■□□□ 1.85
LITAF-211ENST00000572255 RPRD2Q5VT52 1461 aaKnown RBP26.6■■□□□ 1.85
LITAF-211ENST00000572255 GCC2Q8IWJ2 1684 aa26.57■■□□□ 1.84
LITAF-211ENST00000572255 ADGRB3O60242 1522 aa26.57■■□□□ 1.84
LITAF-211ENST00000572255 ITGAEP38570 1179 aa26.56■■□□□ 1.84
LITAF-211ENST00000572255 SLC52A1Q9NWF4 448 aa26.55■■□□□ 1.84
LITAF-211ENST00000572255 TOM1O60784 492 aa26.54■■□□□ 1.84
LITAF-211ENST00000572255 LRRC7Q96NW7 1537 aa26.54■■□□□ 1.84
LITAF-211ENST00000572255 DISP3Q9P2K9 1392 aa26.52■■□□□ 1.84
LITAF-211ENST00000572255 IQGAP3Q86VI3 1631 aa26.51■■□□□ 1.83
LITAF-211ENST00000572255 SCAF1Q9H7N4 1312 aaKnown RBP26.51■■□□□ 1.83
LITAF-211ENST00000572255 PIP4K2BP78356 416 aa26.5■■□□□ 1.83
LITAF-211ENST00000572255 E9PCH4 1651 aa26.5■■□□□ 1.83
LITAF-211ENST00000572255 ALKQ9UM73 1620 aa26.48■■□□□ 1.83
LITAF-211ENST00000572255 MYO5BQ9ULV0 1848 aa26.47■■□□□ 1.83
LITAF-211ENST00000572255 TMEM131LA2VDJ0 1609 aa26.44■■□□□ 1.82
LITAF-211ENST00000572255 NUP155O75694 1391 aa26.44■■□□□ 1.82
LITAF-211ENST00000572255 RRBP1Q9P2E9 1410 aaKnown RBP26.43■■□□□ 1.82
LITAF-211ENST00000572255 HSPA1LP34931 641 aa26.42■■□□□ 1.82
LITAF-211ENST00000572255 XIRP1Q702N8 1843 aaKnown RBP26.42■■□□□ 1.82
LITAF-211ENST00000572255 ZFYVE9O95405 1425 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms