RNA–Protein interactions for RNA: ENST00000572004.1

PITPNA-203, Transcript of phosphatidylinositol transfer protein alpha, humanhuman

TSL 4

Gene PITPNA, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNA-203ENST00000572004 PARP9Q8IXQ6 854 aa12.75□□□□□ -0.37
PITPNA-203ENST00000572004 EPAS1Q99814 870 aa12.75□□□□□ -0.37
PITPNA-203ENST00000572004 FAM117AQ9C073 453 aa12.75□□□□□ -0.37
PITPNA-203ENST00000572004 TTLL12Q14166 644 aaPredicted RBP12.73□□□□□ -0.37
PITPNA-203ENST00000572004 PCDHGA10Q9Y5H3 936 aa12.73□□□□□ -0.37
PITPNA-203ENST00000572004 TSR1Q2NL82 804 aaKnown RBP12.71□□□□□ -0.37
PITPNA-203ENST00000572004 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
PITPNA-203ENST00000572004 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
PITPNA-203ENST00000572004 NPDC1Q9NQX5 325 aaPredicted RBP12.7□□□□□ -0.38
PITPNA-203ENST00000572004 PLEKHG3A1L390 1219 aa12.67□□□□□ -0.38
PITPNA-203ENST00000572004 DDRGK1Q96HY6 314 aa12.67□□□□□ -0.38
PITPNA-203ENST00000572004 JPH4Q96JJ6 628 aa12.66□□□□□ -0.38
PITPNA-203ENST00000572004 FBXW7Q969H0 707 aa12.64□□□□□ -0.39
PITPNA-203ENST00000572004 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
PITPNA-203ENST00000572004 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
PITPNA-203ENST00000572004 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
PITPNA-203ENST00000572004 NUDT7P0C024 238 aa12.62□□□□□ -0.39
PITPNA-203ENST00000572004 FOSBP53539 338 aa12.62□□□□□ -0.39
PITPNA-203ENST00000572004 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
PITPNA-203ENST00000572004 EIF4G1Q04637 1599 aaKnown RBP12.61□□□□□ -0.39
PITPNA-203ENST00000572004 POTEJP0CG39 1038 aa12.6□□□□□ -0.39
PITPNA-203ENST00000572004 DOK7Q18PE1 504 aa12.6□□□□□ -0.39
PITPNA-203ENST00000572004 ARSIQ5FYB1 569 aa12.6□□□□□ -0.39
PITPNA-203ENST00000572004 REPIN1Q9BWE0 567 aaKnown RBP12.6□□□□□ -0.39
PITPNA-203ENST00000572004 MS4A1P11836 297 aa12.59□□□□□ -0.39
PITPNA-203ENST00000572004 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
PITPNA-203ENST00000572004 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
PITPNA-203ENST00000572004 C6orf132Q5T0Z8 1188 aa12.58□□□□□ -0.4
PITPNA-203ENST00000572004 ZDHHC16Q969W1 377 aa12.58□□□□□ -0.4
PITPNA-203ENST00000572004 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
PITPNA-203ENST00000572004 PADI6Q6TGC4 694 aa12.57□□□□□ -0.4
PITPNA-203ENST00000572004 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
PITPNA-203ENST00000572004 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
PITPNA-203ENST00000572004 SUPT5HO00267 1087 aaKnown RBP12.56□□□□□ -0.4
PITPNA-203ENST00000572004 CLCN1P35523 988 aa12.56□□□□□ -0.4
PITPNA-203ENST00000572004 RIMBP2O15034 1052 aa12.55□□□□□ -0.4
PITPNA-203ENST00000572004 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
PITPNA-203ENST00000572004 NLRP7Q8WX94 980 aa12.54□□□□□ -0.4
PITPNA-203ENST00000572004 ADAM33Q9BZ11 813 aa12.54□□□□□ -0.4
PITPNA-203ENST00000572004 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
PITPNA-203ENST00000572004 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
PITPNA-203ENST00000572004 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.41
PITPNA-203ENST00000572004 METTL3Q86U44 580 aaKnown RBP12.51□□□□□ -0.41
PITPNA-203ENST00000572004 TMUB1Q9BVT8 246 aa12.51□□□□□ -0.41
PITPNA-203ENST00000572004 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
PITPNA-203ENST00000572004 OATP04181 439 aa12.5□□□□□ -0.41
PITPNA-203ENST00000572004 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
PITPNA-203ENST00000572004 ADGRG1Q9Y653 693 aa12.5□□□□□ -0.41
PITPNA-203ENST00000572004 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
PITPNA-203ENST00000572004 SSTR3P32745 418 aaPredicted RBP12.48□□□□□ -0.41
PITPNA-203ENST00000572004 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
PITPNA-203ENST00000572004 PXYLP1Q8TE99 480 aa12.47□□□□□ -0.41
PITPNA-203ENST00000572004 PCMTD1Q96MG8 357 aaPredicted RBP12.47□□□□□ -0.41
PITPNA-203ENST00000572004 PRSS12P56730 875 aa12.46□□□□□ -0.41
PITPNA-203ENST00000572004 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.42
PITPNA-203ENST00000572004 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
PITPNA-203ENST00000572004 TTC13Q8NBP0 860 aa12.45□□□□□ -0.42
PITPNA-203ENST00000572004 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
PITPNA-203ENST00000572004 GOPCQ9HD26 462 aa12.45□□□□□ -0.42
PITPNA-203ENST00000572004 RBM27Q9P2N5 1060 aaKnown RBP12.45□□□□□ -0.42
PITPNA-203ENST00000572004 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
PITPNA-203ENST00000572004 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
PITPNA-203ENST00000572004 FAM217BQ9NTX9 383 aaPredicted RBP12.44□□□□□ -0.42
PITPNA-203ENST00000572004 ZMYND15Q9H091 742 aa12.43□□□□□ -0.42
PITPNA-203ENST00000572004 COL9A1P20849 921 aa12.42□□□□□ -0.42
PITPNA-203ENST00000572004 SH3D19Q5HYK7 790 aa12.42□□□□□ -0.42
PITPNA-203ENST00000572004 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
PITPNA-203ENST00000572004 RBM46Q8TBY0 533 aaKnown RBP12.41□□□□□ -0.42
PITPNA-203ENST00000572004 ARXQ96QS3 562 aa12.4□□□□□ -0.42
PITPNA-203ENST00000572004 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
PITPNA-203ENST00000572004 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
PITPNA-203ENST00000572004 RSPH6AQ9H0K4 717 aa12.38□□□□□ -0.43
PITPNA-203ENST00000572004 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
PITPNA-203ENST00000572004 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
PITPNA-203ENST00000572004 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
PITPNA-203ENST00000572004 PTPREP23469 700 aa12.36□□□□□ -0.43
PITPNA-203ENST00000572004 FLIIQ13045 1269 aa12.36□□□□□ -0.43
PITPNA-203ENST00000572004 POLR3EQ9NVU0 708 aa12.36□□□□□ -0.43
PITPNA-203ENST00000572004 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
PITPNA-203ENST00000572004 SKIV2LQ15477 1246 aaKnown RBP12.35□□□□□ -0.43
PITPNA-203ENST00000572004 RCCD1A6NED2 376 aa12.34□□□□□ -0.43
PITPNA-203ENST00000572004 SNPHO15079 494 aa12.34□□□□□ -0.43
PITPNA-203ENST00000572004 PROCA1Q8NCQ7 364 aaPredicted RBP12.34□□□□□ -0.43
PITPNA-203ENST00000572004 TSKSQ9UJT2 592 aa12.34□□□□□ -0.43
PITPNA-203ENST00000572004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.33□□□□□ -0.44
PITPNA-203ENST00000572004 HOXB1P14653 301 aaPredicted RBP12.32□□□□□ -0.44
PITPNA-203ENST00000572004 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
PITPNA-203ENST00000572004 C3orf80F5H4A9 247 aa12.31□□□□□ -0.44
PITPNA-203ENST00000572004 MYSM1Q5VVJ2 828 aa12.31□□□□□ -0.44
PITPNA-203ENST00000572004 EYA1Q99502 592 aa12.31□□□□□ -0.44
PITPNA-203ENST00000572004 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
PITPNA-203ENST00000572004 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
PITPNA-203ENST00000572004 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
PITPNA-203ENST00000572004 NBPF26B4DH59 902 aa12.3□□□□□ -0.44
PITPNA-203ENST00000572004 ONECUT3O60422 494 aaPredicted RBP12.3□□□□□ -0.44
PITPNA-203ENST00000572004 KCNK17Q96T54 332 aa12.3□□□□□ -0.44
PITPNA-203ENST00000572004 TBC1D2Q9BYX2 928 aa12.3□□□□□ -0.44
PITPNA-203ENST00000572004 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
PITPNA-203ENST00000572004 HOMEZQ8IX15 550 aa12.29□□□□□ -0.44
PITPNA-203ENST00000572004 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms