RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 TCOF1Q13428 1488 aaKnown RBP24.66■■□□□ 1.54
TSR1-202ENST00000571806 A2ML1A8K2U0 1454 aa24.65■■□□□ 1.54
TSR1-202ENST00000571806 KDM5DQ9BY66 1539 aa24.65■■□□□ 1.54
TSR1-202ENST00000571806 LRRC9Q6ZRR7 1453 aa24.64■■□□□ 1.54
TSR1-202ENST00000571806 WASHC2CQ9Y4E1 1318 aa24.63■■□□□ 1.53
TSR1-202ENST00000571806 MAP3K1Q13233 1512 aa24.63■■□□□ 1.53
TSR1-202ENST00000571806 PZPP20742 1482 aa24.61■■□□□ 1.53
TSR1-202ENST00000571806 DNMT1P26358 1616 aaKnown RBP24.6■■□□□ 1.53
TSR1-202ENST00000571806 TNRQ92752 1358 aa24.59■■□□□ 1.53
TSR1-202ENST00000571806 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
TSR1-202ENST00000571806 ZNF335Q9H4Z2 1342 aaPredicted RBP24.57■■□□□ 1.52
TSR1-202ENST00000571806 MIA2Q96PC5 1412 aa24.56■■□□□ 1.52
TSR1-202ENST00000571806 MAST1Q9Y2H9 1570 aa24.55■■□□□ 1.52
TSR1-202ENST00000571806 FBXO31Q5XUX0 539 aaPredicted RBP24.55■■□□□ 1.52
TSR1-202ENST00000571806 NLRP1Q9C000 1473 aa24.53■■□□□ 1.52
TSR1-202ENST00000571806 THEMISQ8N1K5 641 aaPredicted RBP24.53■■□□□ 1.52
TSR1-202ENST00000571806 MYOM3Q5VTT5 1437 aa24.52■■□□□ 1.52
TSR1-202ENST00000571806 RNF17Q9BXT8 1623 aaKnown RBP24.5■■□□□ 1.51
TSR1-202ENST00000571806 EIF2AK4Q9P2K8 1649 aaKnown RBP24.5■■□□□ 1.51
TSR1-202ENST00000571806 POLR1AO95602 1720 aaPredicted RBP24.5■■□□□ 1.51
TSR1-202ENST00000571806 KANK4Q5T7N3 995 aaPredicted RBP24.5■■□□□ 1.51
TSR1-202ENST00000571806 DISP3Q9P2K9 1392 aa24.5■■□□□ 1.51
TSR1-202ENST00000571806 ZC3H13Q5T200 1668 aaKnown RBP24.5■■□□□ 1.51
TSR1-202ENST00000571806 ANKLE2Q86XL3 938 aa24.49■■□□□ 1.51
TSR1-202ENST00000571806 UBAP1LF5GYI3 381 aa24.47■■□□□ 1.51
TSR1-202ENST00000571806 UGGT1Q9NYU2 1555 aa24.46■■□□□ 1.51
TSR1-202ENST00000571806 APLP2Q06481 763 aa24.45■■□□□ 1.5
TSR1-202ENST00000571806 CPS1P31327 1500 aa24.44■■□□□ 1.5
TSR1-202ENST00000571806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.43■■□□□ 1.5
TSR1-202ENST00000571806 NEURL4Q96JN8 1562 aa24.43■■□□□ 1.5
TSR1-202ENST00000571806 ABCC3O15438 1527 aa24.43■■□□□ 1.5
TSR1-202ENST00000571806 DUOX2Q9NRD8 1548 aa24.43■■□□□ 1.5
TSR1-202ENST00000571806 DEPDC5O75140 1603 aa24.42■■□□□ 1.5
TSR1-202ENST00000571806 SPATA31D1Q6ZQQ2 1576 aa24.42■■□□□ 1.5
TSR1-202ENST00000571806 MED14O60244 1454 aa24.41■■□□□ 1.5
TSR1-202ENST00000571806 SHANK2Q9UPX8 1470 aa24.39■■□□□ 1.5
TSR1-202ENST00000571806 NPHP4O75161 1426 aaPredicted RBP24.36■■□□□ 1.49
TSR1-202ENST00000571806 TOM1O60784 492 aa24.36■■□□□ 1.49
TSR1-202ENST00000571806 ERVK-7P63135 1459 aa24.36■■□□□ 1.49
TSR1-202ENST00000571806 ERBINQ96RT1 1412 aa24.35■■□□□ 1.49
TSR1-202ENST00000571806 MROH1Q8NDA8 1641 aa24.35■■□□□ 1.49
TSR1-202ENST00000571806 KIF15Q9NS87 1388 aa24.34■■□□□ 1.49
TSR1-202ENST00000571806 PTPN23Q9H3S7 1636 aa24.33■■□□□ 1.49
TSR1-202ENST00000571806 CROCC2H7BZ55 1655 aa24.32■■□□□ 1.48
TSR1-202ENST00000571806 ILDR2Q71H61 639 aa24.32■■□□□ 1.48
TSR1-202ENST00000571806 ABCC5O15440 1437 aa24.32■■□□□ 1.48
TSR1-202ENST00000571806 ARHGAP31Q2M1Z3 1444 aa24.32■■□□□ 1.48
TSR1-202ENST00000571806 IQGAP1P46940 1657 aa24.31■■□□□ 1.48
TSR1-202ENST00000571806 CEP152O94986 1710 aa24.31■■□□□ 1.48
TSR1-202ENST00000571806 VWDEQ8N2E2 1590 aa24.31■■□□□ 1.48
TSR1-202ENST00000571806 PRDM15P57071 1507 aaPredicted RBP24.3■■□□□ 1.48
TSR1-202ENST00000571806 SOCS7O14512 581 aa24.29■■□□□ 1.48
TSR1-202ENST00000571806 RRP7BPQ9NSQ0 103 aa24.29■■□□□ 1.48
TSR1-202ENST00000571806 DAPK1P53355 1430 aa24.28■■□□□ 1.48
TSR1-202ENST00000571806 KANK1Q14678 1352 aa24.27■■□□□ 1.48
TSR1-202ENST00000571806 FGD6Q6ZV73 1430 aa24.27■■□□□ 1.48
TSR1-202ENST00000571806 UBR1Q8IWV7 1749 aa24.26■■□□□ 1.47
TSR1-202ENST00000571806 ANKRD30AQ9BXX3 1397 aa24.25■■□□□ 1.47
TSR1-202ENST00000571806 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
TSR1-202ENST00000571806 CFAP65Q6ZU64 1925 aaKnown RBP24.23■■□□□ 1.47
TSR1-202ENST00000571806 PIP4K2BP78356 416 aa24.23■■□□□ 1.47
TSR1-202ENST00000571806 SCAF11Q99590 1463 aaKnown RBP24.22■■□□□ 1.47
TSR1-202ENST00000571806 SLIT1O75093 1534 aa24.21■■□□□ 1.47
TSR1-202ENST00000571806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.21■■□□□ 1.472e-7■□□□□ 10.8
TSR1-202ENST00000571806 EID1Q9Y6B2 187 aa24.2■■□□□ 1.46
TSR1-202ENST00000571806 ARHGAP23Q9P227 1491 aa24.19■■□□□ 1.46
TSR1-202ENST00000571806 HSPA1LP34931 641 aa24.19■■□□□ 1.46
TSR1-202ENST00000571806 TXNDC2Q86VQ3 553 aa24.19■■□□□ 1.46
TSR1-202ENST00000571806 SYNMO15061 1565 aa24.19■■□□□ 1.46
TSR1-202ENST00000571806 LMTK2Q8IWU2 1503 aa24.17■■□□□ 1.46
TSR1-202ENST00000571806 STAG3Q9UJ98 1225 aa24.16■■□□□ 1.46
TSR1-202ENST00000571806 LRRC7Q96NW7 1537 aa24.15■■□□□ 1.46
TSR1-202ENST00000571806 KDM5AP29375 1690 aaKnown RBP24.15■■□□□ 1.46
TSR1-202ENST00000571806 CHIC2Q9UKJ5 165 aa24.15■■□□□ 1.46
TSR1-202ENST00000571806 LTKP29376 864 aa24.14■■□□□ 1.45
TSR1-202ENST00000571806 STRCP1A6NGW2 1772 aa24.14■■□□□ 1.45
TSR1-202ENST00000571806 TMEM2Q9UHN6 1383 aa24.13■■□□□ 1.45
TSR1-202ENST00000571806 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
TSR1-202ENST00000571806 ADGRL2O95490 1459 aa24.12■■□□□ 1.45
TSR1-202ENST00000571806 ALKQ9UM73 1620 aa24.1■■□□□ 1.45
TSR1-202ENST00000571806 IDI1Q13907 227 aa24.09■■□□□ 1.45
TSR1-202ENST00000571806 EFCAB6Q5THR3 1501 aa24.09■■□□□ 1.45
TSR1-202ENST00000571806 SLC52A1Q9NWF4 448 aa24.08■■□□□ 1.45
TSR1-202ENST00000571806 FAM50AQ14320 339 aaKnown RBP24.07■■□□□ 1.44
TSR1-202ENST00000571806 NOS1P29475 1434 aa24.06■■□□□ 1.44
TSR1-202ENST00000571806 MED1Q15648 1581 aaPredicted RBP24.05■■□□□ 1.44
TSR1-202ENST00000571806 RPRD2Q5VT52 1461 aaKnown RBP24.05■■□□□ 1.44
TSR1-202ENST00000571806 ANKRD50Q9ULJ7 1429 aa24.03■■□□□ 1.44
TSR1-202ENST00000571806 ADGRB3O60242 1522 aa24■■□□□ 1.43
TSR1-202ENST00000571806 KCNA6P17658 529 aa23.99■■□□□ 1.43
TSR1-202ENST00000571806 HDGFP51858 240 aaKnown RBP23.98■■□□□ 1.43
TSR1-202ENST00000571806 TET3O43151 1660 aa23.97■■□□□ 1.43
TSR1-202ENST00000571806 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
TSR1-202ENST00000571806 XIRP1Q702N8 1843 aaKnown RBP23.96■■□□□ 1.43
TSR1-202ENST00000571806 SLC26A8Q96RN1 970 aa23.93■■□□□ 1.42
TSR1-202ENST00000571806 ROCK1Q13464 1354 aa23.92■■□□□ 1.42
TSR1-202ENST00000571806 FAM135BQ49AJ0 1406 aa23.92■■□□□ 1.42
TSR1-202ENST00000571806 TMEM94Q12767 1356 aa23.91■■□□□ 1.42
TSR1-202ENST00000571806 PROSER2Q86WR7 435 aaPredicted RBP23.91■■□□□ 1.42
TSR1-202ENST00000571806 GCC2Q8IWJ2 1684 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms