RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 ZNF142P52746 1687 aaPredicted RBP21.48■■□□□ 1.03
RAB40B-204ENST00000571554 WASHC2CQ9Y4E1 1318 aa21.48■■□□□ 1.03
RAB40B-204ENST00000571554 CEP170BQ9Y4F5 1589 aaPredicted RBP21.48■■□□□ 1.03
RAB40B-204ENST00000571554 NCOA1Q15788 1441 aa21.47■■□□□ 1.03
RAB40B-204ENST00000571554 FBXO31Q5XUX0 539 aaPredicted RBP21.47■■□□□ 1.03
RAB40B-204ENST00000571554 ABCC5O15440 1437 aa21.46■■□□□ 1.03
RAB40B-204ENST00000571554 DMRT2Q9Y5R5 561 aa21.46■■□□□ 1.03
RAB40B-204ENST00000571554 RNF17Q9BXT8 1623 aaKnown RBP21.45■■□□□ 1.02
RAB40B-204ENST00000571554 CERKQ8TCT0 537 aa21.44■■□□□ 1.02
RAB40B-204ENST00000571554 NCKAP5LQ9HCH0 1330 aa21.44■■□□□ 1.02
RAB40B-204ENST00000571554 DAPK1P53355 1430 aa21.44■■□□□ 1.02
RAB40B-204ENST00000571554 DNMT1P26358 1616 aaKnown RBP21.44■■□□□ 1.02
RAB40B-204ENST00000571554 EIF2AK4Q9P2K8 1649 aaKnown RBP21.44■■□□□ 1.02
RAB40B-204ENST00000571554 RRP7BPQ9NSQ0 103 aa21.43■■□□□ 1.02
RAB40B-204ENST00000571554 PZPP20742 1482 aa21.43■■□□□ 1.02
RAB40B-204ENST00000571554 TCOF1Q13428 1488 aaKnown RBP21.43■■□□□ 1.02
RAB40B-204ENST00000571554 PTPRTO14522 1441 aa21.42■■□□□ 1.02
RAB40B-204ENST00000571554 DUOX2Q9NRD8 1548 aa21.42■■□□□ 1.02
RAB40B-204ENST00000571554 KIF15Q9NS87 1388 aa21.42■■□□□ 1.02
RAB40B-204ENST00000571554 FAM135AQ9P2D6 1515 aa21.42■■□□□ 1.02
RAB40B-204ENST00000571554 SHANK2Q9UPX8 1470 aa21.42■■□□□ 1.02
RAB40B-204ENST00000571554 MROH1Q8NDA8 1641 aa21.41■■□□□ 1.02
RAB40B-204ENST00000571554 TNRQ92752 1358 aa21.41■■□□□ 1.02
RAB40B-204ENST00000571554 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
RAB40B-204ENST00000571554 CEP152O94986 1710 aa21.41■■□□□ 1.02
RAB40B-204ENST00000571554 ABCC3O15438 1527 aa21.4■■□□□ 1.02
RAB40B-204ENST00000571554 A2ML1A8K2U0 1454 aa21.39■■□□□ 1.02
RAB40B-204ENST00000571554 ZC3H13Q5T200 1668 aaKnown RBP21.37■■□□□ 1.01
RAB40B-204ENST00000571554 FAM50AQ14320 339 aaKnown RBP21.37■■□□□ 1.01
RAB40B-204ENST00000571554 PLA2R1Q13018 1463 aa21.35■■□□□ 1.01
RAB40B-204ENST00000571554 CFAP65Q6ZU64 1925 aaKnown RBP21.35■■□□□ 1.01
RAB40B-204ENST00000571554 ERBINQ96RT1 1412 aa21.33■■□□□ 1.01
RAB40B-204ENST00000571554 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1.01
RAB40B-204ENST00000571554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.01
RAB40B-204ENST00000571554 PRDM15P57071 1507 aaPredicted RBP21.31■■□□□ 1
RAB40B-204ENST00000571554 LTBP4Q8N2S1 1624 aa21.31■■□□□ 1
RAB40B-204ENST00000571554 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
RAB40B-204ENST00000571554 PKD2Q13563 968 aa21.3■■□□□ 1
RAB40B-204ENST00000571554 ERVK-7P63135 1459 aa21.3■■□□□ 1
RAB40B-204ENST00000571554 POLR1AO95602 1720 aaPredicted RBP21.29■■□□□ 1
RAB40B-204ENST00000571554 SPATA31D1Q6ZQQ2 1576 aa21.29■■□□□ 1
RAB40B-204ENST00000571554 ZNF335Q9H4Z2 1342 aaPredicted RBP21.29■■□□□ 1
RAB40B-204ENST00000571554 NLRP1Q9C000 1473 aa21.28■■□□□ 1
RAB40B-204ENST00000571554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.28■■□□□ 1
RAB40B-204ENST00000571554 DEPDC5O75140 1603 aa21.28■■□□□ 1
RAB40B-204ENST00000571554 UGGT1Q9NYU2 1555 aa21.27■■□□□ 1
RAB40B-204ENST00000571554 NEURL4Q96JN8 1562 aa21.26■□□□□ 0.99
RAB40B-204ENST00000571554 ADGRL2O95490 1459 aa21.24■□□□□ 0.99
RAB40B-204ENST00000571554 THEMISQ8N1K5 641 aaPredicted RBP21.22■□□□□ 0.99
RAB40B-204ENST00000571554 KANK1Q14678 1352 aa21.22■□□□□ 0.99
RAB40B-204ENST00000571554 ANKLE2Q86XL3 938 aa21.2■□□□□ 0.98
RAB40B-204ENST00000571554 ARHGAP31Q2M1Z3 1444 aa21.19■□□□□ 0.98
RAB40B-204ENST00000571554 UBR1Q8IWV7 1749 aa21.18■□□□□ 0.98
RAB40B-204ENST00000571554 ITGAEP38570 1179 aa21.18■□□□□ 0.98
RAB40B-204ENST00000571554 VWDEQ8N2E2 1590 aa21.18■□□□□ 0.98
RAB40B-204ENST00000571554 ANKRD50Q9ULJ7 1429 aa21.17■□□□□ 0.98
RAB40B-204ENST00000571554 LMTK2Q8IWU2 1503 aa21.15■□□□□ 0.98
RAB40B-204ENST00000571554 NPHP4O75161 1426 aaPredicted RBP21.15■□□□□ 0.98
RAB40B-204ENST00000571554 PIK3C2BO00750 1634 aa21.15■□□□□ 0.98
RAB40B-204ENST00000571554 IQGAP1P46940 1657 aa21.13■□□□□ 0.97
RAB40B-204ENST00000571554 EFCAB6Q5THR3 1501 aa21.13■□□□□ 0.97
RAB40B-204ENST00000571554 IQSEC2Q5JU85 1478 aa21.13■□□□□ 0.97
RAB40B-204ENST00000571554 MED14O60244 1454 aa21.11■□□□□ 0.97
RAB40B-204ENST00000571554 SYNMO15061 1565 aa21.1■□□□□ 0.97
RAB40B-204ENST00000571554 STAG3Q9UJ98 1225 aa21.08■□□□□ 0.97
RAB40B-204ENST00000571554 UNC13BO14795 1591 aa21.07■□□□□ 0.96
RAB40B-204ENST00000571554 UBAP1LF5GYI3 381 aa21.07■□□□□ 0.96
RAB40B-204ENST00000571554 LTKP29376 864 aa21.07■□□□□ 0.96
RAB40B-204ENST00000571554 SCAF11Q99590 1463 aaKnown RBP21.07■□□□□ 0.96
RAB40B-204ENST00000571554 IDI1Q13907 227 aa21.06■□□□□ 0.96
RAB40B-204ENST00000571554 ROCK1Q13464 1354 aa21.06■□□□□ 0.96
RAB40B-204ENST00000571554 ARHGAP23Q9P227 1491 aa21.06■□□□□ 0.96
RAB40B-204ENST00000571554 TET3O43151 1660 aa21.05■□□□□ 0.96
RAB40B-204ENST00000571554 TXNDC2Q86VQ3 553 aa21.05■□□□□ 0.96
RAB40B-204ENST00000571554 NOS1P29475 1434 aa21.04■□□□□ 0.96
RAB40B-204ENST00000571554 SLIT1O75093 1534 aa21.04■□□□□ 0.96
RAB40B-204ENST00000571554 CPS1P31327 1500 aa21.04■□□□□ 0.96
RAB40B-204ENST00000571554 STRCP1A6NGW2 1772 aa21.04■□□□□ 0.96
RAB40B-204ENST00000571554 GCC2Q8IWJ2 1684 aa21.02■□□□□ 0.96
RAB40B-204ENST00000571554 TMEM2Q9UHN6 1383 aa21.01■□□□□ 0.95
RAB40B-204ENST00000571554 ADGRB3O60242 1522 aa21■□□□□ 0.95
RAB40B-204ENST00000571554 EID1Q9Y6B2 187 aa21■□□□□ 0.95
RAB40B-204ENST00000571554 E9PCH4 1651 aa20.99■□□□□ 0.95
RAB40B-204ENST00000571554 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
RAB40B-204ENST00000571554 RPRD2Q5VT52 1461 aaKnown RBP20.99■□□□□ 0.95
RAB40B-204ENST00000571554 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
RAB40B-204ENST00000571554 MYO5BQ9ULV0 1848 aa20.99■□□□□ 0.95
RAB40B-204ENST00000571554 KDM5AP29375 1690 aaKnown RBP20.99■□□□□ 0.95
RAB40B-204ENST00000571554 IQGAP3Q86VI3 1631 aa20.98■□□□□ 0.95
RAB40B-204ENST00000571554 NUP155O75694 1391 aa20.97■□□□□ 0.95
RAB40B-204ENST00000571554 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
RAB40B-204ENST00000571554 PIP4K2BP78356 416 aa20.96■□□□□ 0.95
RAB40B-204ENST00000571554 SLC52A1Q9NWF4 448 aa20.95■□□□□ 0.94
RAB40B-204ENST00000571554 LRRC7Q96NW7 1537 aa20.94■□□□□ 0.94
RAB40B-204ENST00000571554 CHGAP10645 457 aaKnown RBP20.92■□□□□ 0.94
RAB40B-204ENST00000571554 SLC26A8Q96RN1 970 aa20.91■□□□□ 0.94
RAB40B-204ENST00000571554 TMEM131LA2VDJ0 1609 aa20.9■□□□□ 0.94
RAB40B-204ENST00000571554 TOM1O60784 492 aa20.9■□□□□ 0.94
RAB40B-204ENST00000571554 BCANQ96GW7 911 aa20.89■□□□□ 0.93
RAB40B-204ENST00000571554 ALKQ9UM73 1620 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms