RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 TIAM1Q13009 1591 aa33.75■■■□□ 2.99
UBFD1-210ENST00000571064 MED1Q15648 1581 aaPredicted RBP33.75■■■□□ 2.99
UBFD1-210ENST00000571064 MBD5Q9P267 1494 aa33.74■■■□□ 2.99
UBFD1-210ENST00000571064 NEURL4Q96JN8 1562 aa33.73■■■□□ 2.99
UBFD1-210ENST00000571064 TOM1O60784 492 aa33.73■■■□□ 2.99
UBFD1-210ENST00000571064 TNRQ92752 1358 aa33.72■■■□□ 2.99
UBFD1-210ENST00000571064 DHX29Q7Z478 1369 aaKnown RBP33.72■■■□□ 2.99
UBFD1-210ENST00000571064 SHANK2Q9UPX8 1470 aa33.71■■■□□ 2.99
UBFD1-210ENST00000571064 POLR1AO95602 1720 aaPredicted RBP33.71■■■□□ 2.99
UBFD1-210ENST00000571064 CPS1P31327 1500 aa33.71■■■□□ 2.99
UBFD1-210ENST00000571064 MAP3K1Q13233 1512 aa33.7■■■□□ 2.99
UBFD1-210ENST00000571064 RTEL1-TNFRSF6BF6WH68 1400 aa33.69■■■□□ 2.98
UBFD1-210ENST00000571064 KIF3BO15066 747 aa33.68■■■□□ 2.98
UBFD1-210ENST00000571064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.64■■■□□ 2.98
UBFD1-210ENST00000571064 PZPP20742 1482 aa33.63■■■□□ 2.97
UBFD1-210ENST00000571064 ANKLE2Q86XL3 938 aa33.63■■■□□ 2.97
UBFD1-210ENST00000571064 KANK4Q5T7N3 995 aaPredicted RBP33.61■■■□□ 2.97
UBFD1-210ENST00000571064 KDM5DQ9BY66 1539 aa33.6■■■□□ 2.97
UBFD1-210ENST00000571064 LRRC9Q6ZRR7 1453 aa33.6■■■□□ 2.97
UBFD1-210ENST00000571064 VWDEQ8N2E2 1590 aa33.6■■■□□ 2.97
UBFD1-210ENST00000571064 EHBP1L1Q8N3D4 1523 aa33.59■■■□□ 2.97
UBFD1-210ENST00000571064 WASHC2CQ9Y4E1 1318 aa33.59■■■□□ 2.97
UBFD1-210ENST00000571064 THEMISQ8N1K5 641 aaPredicted RBP33.57■■■□□ 2.96
UBFD1-210ENST00000571064 APLP2Q06481 763 aa33.56■■■□□ 2.96
UBFD1-210ENST00000571064 MIA2Q96PC5 1412 aa33.55■■■□□ 2.96
UBFD1-210ENST00000571064 ALKQ9UM73 1620 aa33.55■■■□□ 2.96
UBFD1-210ENST00000571064 NPHP4O75161 1426 aaPredicted RBP33.54■■■□□ 2.96
UBFD1-210ENST00000571064 FAM135AQ9P2D6 1515 aa33.53■■■□□ 2.96
UBFD1-210ENST00000571064 UGGT1Q9NYU2 1555 aa33.52■■■□□ 2.96
UBFD1-210ENST00000571064 CCDC141Q6ZP82 1450 aa33.52■■■□□ 2.96
UBFD1-210ENST00000571064 PHF23Q9BUL5 403 aaPredicted RBP33.52■■■□□ 2.96
UBFD1-210ENST00000571064 NLRP1Q9C000 1473 aa33.51■■■□□ 2.96
UBFD1-210ENST00000571064 MED14O60244 1454 aa33.5■■■□□ 2.95
UBFD1-210ENST00000571064 SENP3Q9H4L4 574 aaPredicted RBP33.49■■■□□ 2.95
UBFD1-210ENST00000571064 DEPDC5O75140 1603 aa33.48■■■□□ 2.95
UBFD1-210ENST00000571064 CAMSAP2Q08AD1 1489 aa33.47■■■□□ 2.95
UBFD1-210ENST00000571064 NCOA2Q15596 1464 aa33.44■■■□□ 2.94
UBFD1-210ENST00000571064 RSPH4AQ5TD94 716 aa33.43■■■□□ 2.94
UBFD1-210ENST00000571064 IQGAP1P46940 1657 aa33.42■■■□□ 2.94
UBFD1-210ENST00000571064 STRCP1A6NGW2 1772 aa33.41■■■□□ 2.94
UBFD1-210ENST00000571064 LRRC7Q96NW7 1537 aa33.39■■■□□ 2.94
UBFD1-210ENST00000571064 TSPY4P0CV99 314 aa33.35■■■□□ 2.93
UBFD1-210ENST00000571064 TSPY10P0CW01 314 aa33.35■■■□□ 2.93
UBFD1-210ENST00000571064 PPARGC1BQ86YN6 1023 aaKnown RBP33.34■■■□□ 2.93
UBFD1-210ENST00000571064 ARHGEF5Q12774 1597 aa33.32■■■□□ 2.92
UBFD1-210ENST00000571064 ABCC3O15438 1527 aa33.32■■■□□ 2.92
UBFD1-210ENST00000571064 RNF17Q9BXT8 1623 aaKnown RBP33.31■■■□□ 2.92
UBFD1-210ENST00000571064 SYNMO15061 1565 aa33.29■■■□□ 2.92
UBFD1-210ENST00000571064 ERVK-7P63135 1459 aa33.28■■■□□ 2.92
UBFD1-210ENST00000571064 ZC3H13Q5T200 1668 aaKnown RBP33.24■■■□□ 2.91
UBFD1-210ENST00000571064 RGS17Q9UGC6 210 aaPredicted RBP33.23■■■□□ 2.91
UBFD1-210ENST00000571064 UBR1Q8IWV7 1749 aa33.2■■■□□ 2.91
UBFD1-210ENST00000571064 SCAF11Q99590 1463 aaKnown RBP33.19■■■□□ 2.9
UBFD1-210ENST00000571064 LTKP29376 864 aa33.19■■■□□ 2.9
UBFD1-210ENST00000571064 MYOM3Q5VTT5 1437 aa33.19■■■□□ 2.9
UBFD1-210ENST00000571064 CFAP65Q6ZU64 1925 aaKnown RBP33.18■■■□□ 2.9
UBFD1-210ENST00000571064 MROH1Q8NDA8 1641 aa33.18■■■□□ 2.9
UBFD1-210ENST00000571064 MAST1Q9Y2H9 1570 aa33.17■■■□□ 2.9
UBFD1-210ENST00000571064 TXNDC2Q86VQ3 553 aa33.16■■■□□ 2.9
UBFD1-210ENST00000571064 EIF2AK4Q9P2K8 1649 aaKnown RBP33.16■■■□□ 2.9
UBFD1-210ENST00000571064 CEP152O94986 1710 aa33.16■■■□□ 2.9
UBFD1-210ENST00000571064 ARHGAP23Q9P227 1491 aa33.12■■■□□ 2.89
UBFD1-210ENST00000571064 XIRP1Q702N8 1843 aaKnown RBP33.11■■■□□ 2.89
UBFD1-210ENST00000571064 SLIT1O75093 1534 aa33.1■■■□□ 2.89
UBFD1-210ENST00000571064 FGD6Q6ZV73 1430 aa33.06■■■□□ 2.88
UBFD1-210ENST00000571064 EID1Q9Y6B2 187 aa33.05■■■□□ 2.88
UBFD1-210ENST00000571064 DUOX2Q9NRD8 1548 aa33.02■■■□□ 2.88
UBFD1-210ENST00000571064 FAM135BQ49AJ0 1406 aa33.02■■■□□ 2.88
UBFD1-210ENST00000571064 POTEAQ6S8J7 498 aa33.01■■■□□ 2.87
UBFD1-210ENST00000571064 PTPN23Q9H3S7 1636 aa33.01■■■□□ 2.87
UBFD1-210ENST00000571064 ARHGAP31Q2M1Z3 1444 aa33■■■□□ 2.87
UBFD1-210ENST00000571064 TMEM94Q12767 1356 aa32.97■■■□□ 2.87
UBFD1-210ENST00000571064 TMEM2Q9UHN6 1383 aa32.97■■■□□ 2.87
UBFD1-210ENST00000571064 PIK3C2BO00750 1634 aa32.97■■■□□ 2.87
UBFD1-210ENST00000571064 PRDM15P57071 1507 aaPredicted RBP32.96■■■□□ 2.87
UBFD1-210ENST00000571064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.95■■■□□ 2.875e-12■□□□□ 11.1
UBFD1-210ENST00000571064 STAG3Q9UJ98 1225 aa32.94■■■□□ 2.86
UBFD1-210ENST00000571064 KIF15Q9NS87 1388 aa32.94■■■□□ 2.86
UBFD1-210ENST00000571064 RBM33Q96EV2 1170 aaKnown RBP32.93■■■□□ 2.86
UBFD1-210ENST00000571064 RRP7BPQ9NSQ0 103 aa32.92■■■□□ 2.86
UBFD1-210ENST00000571064 KCNA6P17658 529 aa32.9■■■□□ 2.86
UBFD1-210ENST00000571064 ROBO1Q9Y6N7 1651 aa32.89■■■□□ 2.86
UBFD1-210ENST00000571064 SLC26A8Q96RN1 970 aa32.89■■■□□ 2.86
UBFD1-210ENST00000571064 ERBINQ96RT1 1412 aa32.88■■■□□ 2.85
UBFD1-210ENST00000571064 PROSER2Q86WR7 435 aaPredicted RBP32.88■■■□□ 2.85
UBFD1-210ENST00000571064 IDI1Q13907 227 aa32.87■■■□□ 2.85
UBFD1-210ENST00000571064 EFCAB6Q5THR3 1501 aa32.86■■■□□ 2.85
UBFD1-210ENST00000571064 RRBP1Q9P2E9 1410 aaKnown RBP32.85■■■□□ 2.85
UBFD1-210ENST00000571064 FAM50AQ14320 339 aaKnown RBP32.84■■■□□ 2.85
UBFD1-210ENST00000571064 ABCC5O15440 1437 aa32.84■■■□□ 2.85
UBFD1-210ENST00000571064 TET3O43151 1660 aa32.82■■■□□ 2.84
UBFD1-210ENST00000571064 KANK1Q14678 1352 aa32.81■■■□□ 2.84
UBFD1-210ENST00000571064 CROCC2H7BZ55 1655 aa32.8■■■□□ 2.84
UBFD1-210ENST00000571064 KDM5AP29375 1690 aaKnown RBP32.79■■■□□ 2.84
UBFD1-210ENST00000571064 DAPK1P53355 1430 aa32.77■■■□□ 2.84
UBFD1-210ENST00000571064 SETD1AO15047 1707 aaKnown RBP32.74■■■□□ 2.83
UBFD1-210ENST00000571064 NKTRP30414 1462 aaKnown RBP32.74■■■□□ 2.83
UBFD1-210ENST00000571064 NWD1Q149M9 1564 aa32.73■■■□□ 2.83
UBFD1-210ENST00000571064 LMTK2Q8IWU2 1503 aa32.72■■■□□ 2.83
UBFD1-210ENST00000571064 MSH6P52701 1360 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms