RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 CROCC2H7BZ55 1655 aa19.56■□□□□ 0.72
TVP23B-204ENST00000571018 MROH2AA6NES4 1674 aa19.56■□□□□ 0.72
TVP23B-204ENST00000571018 FAM50AQ14320 339 aaKnown RBP19.55■□□□□ 0.72
TVP23B-204ENST00000571018 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
TVP23B-204ENST00000571018 PPARGC1BQ86YN6 1023 aaKnown RBP19.54■□□□□ 0.72
TVP23B-204ENST00000571018 CLTCQ00610 1675 aaKnown RBP19.52■□□□□ 0.72
TVP23B-204ENST00000571018 DUOX2Q9NRD8 1548 aa19.52■□□□□ 0.72
TVP23B-204ENST00000571018 RRP7BPQ9NSQ0 103 aa19.51■□□□□ 0.71
TVP23B-204ENST00000571018 KIF15Q9NS87 1388 aa19.51■□□□□ 0.71
TVP23B-204ENST00000571018 FAM135AQ9P2D6 1515 aa19.51■□□□□ 0.71
TVP23B-204ENST00000571018 PREX1Q8TCU6 1659 aa19.5■□□□□ 0.71
TVP23B-204ENST00000571018 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
TVP23B-204ENST00000571018 EIF2AK4Q9P2K8 1649 aaKnown RBP19.5■□□□□ 0.71
TVP23B-204ENST00000571018 NPATQ14207 1427 aa19.5■□□□□ 0.71
TVP23B-204ENST00000571018 ANKRD30AQ9BXX3 1397 aa19.49■□□□□ 0.71
TVP23B-204ENST00000571018 HSPA2P54652 639 aa19.49■□□□□ 0.71
TVP23B-204ENST00000571018 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
TVP23B-204ENST00000571018 SETD1BQ9UPS6 1966 aaKnown RBP19.48■□□□□ 0.71
TVP23B-204ENST00000571018 KDM5DQ9BY66 1539 aa19.48■□□□□ 0.71
TVP23B-204ENST00000571018 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
TVP23B-204ENST00000571018 NCOA1Q15788 1441 aa19.48■□□□□ 0.71
TVP23B-204ENST00000571018 WASHC2CQ9Y4E1 1318 aa19.48■□□□□ 0.71
TVP23B-204ENST00000571018 RNF17Q9BXT8 1623 aaKnown RBP19.47■□□□□ 0.71
TVP23B-204ENST00000571018 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
TVP23B-204ENST00000571018 ADGRL2O95490 1459 aa19.47■□□□□ 0.71
TVP23B-204ENST00000571018 PTPRKQ15262 1439 aa19.46■□□□□ 0.71
TVP23B-204ENST00000571018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.44■□□□□ 0.7
TVP23B-204ENST00000571018 MROH1Q8NDA8 1641 aa19.43■□□□□ 0.7
TVP23B-204ENST00000571018 PZPP20742 1482 aa19.41■□□□□ 0.7
TVP23B-204ENST00000571018 ABCC3O15438 1527 aa19.4■□□□□ 0.7
TVP23B-204ENST00000571018 FBXO31Q5XUX0 539 aaPredicted RBP19.39■□□□□ 0.69
TVP23B-204ENST00000571018 ZC3H13Q5T200 1668 aaKnown RBP19.39■□□□□ 0.69
TVP23B-204ENST00000571018 PRDM15P57071 1507 aaPredicted RBP19.38■□□□□ 0.69
TVP23B-204ENST00000571018 RRBP1Q9P2E9 1410 aaKnown RBP19.38■□□□□ 0.69
TVP23B-204ENST00000571018 ROCK1Q13464 1354 aa19.37■□□□□ 0.69
TVP23B-204ENST00000571018 DMRT2Q9Y5R5 561 aa19.37■□□□□ 0.69
TVP23B-204ENST00000571018 DEPDC5O75140 1603 aa19.36■□□□□ 0.69
TVP23B-204ENST00000571018 ANKRD50Q9ULJ7 1429 aa19.35■□□□□ 0.69
TVP23B-204ENST00000571018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.69
TVP23B-204ENST00000571018 MYO3AQ8NEV4 1616 aa19.35■□□□□ 0.69
TVP23B-204ENST00000571018 TNRQ92752 1358 aa19.34■□□□□ 0.69
TVP23B-204ENST00000571018 ITGAEP38570 1179 aa19.34■□□□□ 0.69
TVP23B-204ENST00000571018 KANK1Q14678 1352 aa19.33■□□□□ 0.69
TVP23B-204ENST00000571018 CEP152O94986 1710 aa19.32■□□□□ 0.68
TVP23B-204ENST00000571018 ZNF142P52746 1687 aaPredicted RBP19.32■□□□□ 0.68
TVP23B-204ENST00000571018 CAMSAP1Q5T5Y3 1602 aa19.32■□□□□ 0.68
TVP23B-204ENST00000571018 CEP170BQ9Y4F5 1589 aaPredicted RBP19.32■□□□□ 0.68
TVP23B-204ENST00000571018 ARHGAP31Q2M1Z3 1444 aa19.31■□□□□ 0.68
TVP23B-204ENST00000571018 VWDEQ8N2E2 1590 aa19.31■□□□□ 0.68
TVP23B-204ENST00000571018 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
TVP23B-204ENST00000571018 STRCQ7RTU9 1775 aa19.29■□□□□ 0.68
TVP23B-204ENST00000571018 SPATA31D1Q6ZQQ2 1576 aa19.29■□□□□ 0.68
TVP23B-204ENST00000571018 LMTK2Q8IWU2 1503 aa19.29■□□□□ 0.68
TVP23B-204ENST00000571018 ERVK-7P63135 1459 aa19.28■□□□□ 0.68
TVP23B-204ENST00000571018 NLRP1Q9C000 1473 aa19.28■□□□□ 0.68
TVP23B-204ENST00000571018 PLA2R1Q13018 1463 aa19.26■□□□□ 0.67
TVP23B-204ENST00000571018 NPM3O75607 178 aaKnown RBP19.25■□□□□ 0.67
TVP23B-204ENST00000571018 ILDR1Q86SU0 546 aaPredicted RBP19.24■□□□□ 0.67
TVP23B-204ENST00000571018 PTPRTO14522 1441 aa19.24■□□□□ 0.67
TVP23B-204ENST00000571018 PKD2Q13563 968 aa19.22■□□□□ 0.67
TVP23B-204ENST00000571018 UNC13BO14795 1591 aa19.22■□□□□ 0.67
TVP23B-204ENST00000571018 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
TVP23B-204ENST00000571018 NCKAP5LQ9HCH0 1330 aa19.21■□□□□ 0.67
TVP23B-204ENST00000571018 EFCAB6Q5THR3 1501 aa19.2■□□□□ 0.66
TVP23B-204ENST00000571018 UGGT1Q9NYU2 1555 aa19.2■□□□□ 0.66
TVP23B-204ENST00000571018 CFAP65Q6ZU64 1925 aaKnown RBP19.17■□□□□ 0.66
TVP23B-204ENST00000571018 RPRD2Q5VT52 1461 aaKnown RBP19.17■□□□□ 0.66
TVP23B-204ENST00000571018 NOS1P29475 1434 aa19.17■□□□□ 0.66
TVP23B-204ENST00000571018 NAIPQ13075 1403 aa19.17■□□□□ 0.66
TVP23B-204ENST00000571018 TET3O43151 1660 aa19.16■□□□□ 0.66
TVP23B-204ENST00000571018 NUP155O75694 1391 aa19.16■□□□□ 0.66
TVP23B-204ENST00000571018 IQGAP3Q86VI3 1631 aa19.14■□□□□ 0.66
TVP23B-204ENST00000571018 ANKLE2Q86XL3 938 aa19.14■□□□□ 0.65
TVP23B-204ENST00000571018 HFM1A2PYH4 1435 aa19.13■□□□□ 0.65
TVP23B-204ENST00000571018 GCC2Q8IWJ2 1684 aa19.12■□□□□ 0.65
TVP23B-204ENST00000571018 SYNMO15061 1565 aa19.12■□□□□ 0.65
TVP23B-204ENST00000571018 IDI1Q13907 227 aa19.12■□□□□ 0.65
TVP23B-204ENST00000571018 UBR1Q8IWV7 1749 aa19.11■□□□□ 0.65
TVP23B-204ENST00000571018 SLC52A1Q9NWF4 448 aa19.11■□□□□ 0.65
TVP23B-204ENST00000571018 PIK3C2BO00750 1634 aa19.1■□□□□ 0.65
TVP23B-204ENST00000571018 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
TVP23B-204ENST00000571018 POLR1AO95602 1720 aaPredicted RBP19.09■□□□□ 0.65
TVP23B-204ENST00000571018 CERKQ8TCT0 537 aa19.09■□□□□ 0.65
TVP23B-204ENST00000571018 RNF216Q9NWF9 866 aaPredicted RBP19.09■□□□□ 0.65
TVP23B-204ENST00000571018 E9PCH4 1651 aa19.08■□□□□ 0.65
TVP23B-204ENST00000571018 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
TVP23B-204ENST00000571018 MED14O60244 1454 aa19.08■□□□□ 0.64
TVP23B-204ENST00000571018 ARHGAP23Q9P227 1491 aa19.07■□□□□ 0.64
TVP23B-204ENST00000571018 KDM5AP29375 1690 aaKnown RBP19.07■□□□□ 0.64
TVP23B-204ENST00000571018 SLIT1O75093 1534 aa19.06■□□□□ 0.64
TVP23B-204ENST00000571018 NPHP4O75161 1426 aaPredicted RBP19.06■□□□□ 0.64
TVP23B-204ENST00000571018 LTBP4Q8N2S1 1624 aa19.05■□□□□ 0.64
TVP23B-204ENST00000571018 TMEM2Q9UHN6 1383 aa19.05■□□□□ 0.64
TVP23B-204ENST00000571018 TXNDC2Q86VQ3 553 aa19.04■□□□□ 0.64
TVP23B-204ENST00000571018 FBXO41Q8TF61 875 aa19.04■□□□□ 0.64
TVP23B-204ENST00000571018 ZNF335Q9H4Z2 1342 aaPredicted RBP19.03■□□□□ 0.64
TVP23B-204ENST00000571018 LTKP29376 864 aa19.03■□□□□ 0.64
TVP23B-204ENST00000571018 SCAF11Q99590 1463 aaKnown RBP19.03■□□□□ 0.64
TVP23B-204ENST00000571018 ADGRB3O60242 1522 aa19.02■□□□□ 0.64
TVP23B-204ENST00000571018 EID1Q9Y6B2 187 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms