RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 DNMT1P26358 1616 aaKnown RBP8.42□□□□□ -1.06
CHD3-212ENST00000570758 CROCC2H7BZ55 1655 aa8.42□□□□□ -1.06
CHD3-212ENST00000570758 STRCQ7RTU9 1775 aa8.42□□□□□ -1.06
CHD3-212ENST00000570758 MROH1Q8NDA8 1641 aa8.41□□□□□ -1.06
CHD3-212ENST00000570758 RNF17Q9BXT8 1623 aaKnown RBP8.41□□□□□ -1.06
CHD3-212ENST00000570758 KIF15Q9NS87 1388 aa8.41□□□□□ -1.06
CHD3-212ENST00000570758 RRP7BPQ9NSQ0 103 aa8.41□□□□□ -1.06
CHD3-212ENST00000570758 MYO3AQ8NEV4 1616 aa8.4□□□□□ -1.06
CHD3-212ENST00000570758 DUOX2Q9NRD8 1548 aa8.4□□□□□ -1.06
CHD3-212ENST00000570758 FAM135AQ9P2D6 1515 aa8.4□□□□□ -1.06
CHD3-212ENST00000570758 NCOA1Q15788 1441 aa8.4□□□□□ -1.06
CHD3-212ENST00000570758 WASHC2CQ9Y4E1 1318 aa8.4□□□□□ -1.06
CHD3-212ENST00000570758 CHIC2Q9UKJ5 165 aa8.4□□□□□ -1.06
CHD3-212ENST00000570758 EIF2AK4Q9P2K8 1649 aaKnown RBP8.4□□□□□ -1.07
CHD3-212ENST00000570758 ABCC3O15438 1527 aa8.39□□□□□ -1.07
CHD3-212ENST00000570758 PZPP20742 1482 aa8.39□□□□□ -1.07
CHD3-212ENST00000570758 TNRQ92752 1358 aa8.39□□□□□ -1.07
CHD3-212ENST00000570758 FAM50AQ14320 339 aaKnown RBP8.39□□□□□ -1.07
CHD3-212ENST00000570758 PPARGC1BQ86YN6 1023 aaKnown RBP8.39□□□□□ -1.07
CHD3-212ENST00000570758 CAMSAP1Q5T5Y3 1602 aa8.39□□□□□ -1.07
CHD3-212ENST00000570758 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
CHD3-212ENST00000570758 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
CHD3-212ENST00000570758 ZNF142P52746 1687 aaPredicted RBP8.38□□□□□ -1.07
CHD3-212ENST00000570758 PTPRTO14522 1441 aa8.37□□□□□ -1.07
CHD3-212ENST00000570758 ERBINQ96RT1 1412 aa8.37□□□□□ -1.07
CHD3-212ENST00000570758 ANKRD30AQ9BXX3 1397 aa8.37□□□□□ -1.07
CHD3-212ENST00000570758 DMRT2Q9Y5R5 561 aa8.37□□□□□ -1.07
CHD3-212ENST00000570758 A2ML1A8K2U0 1454 aa8.37□□□□□ -1.07
CHD3-212ENST00000570758 ADGRL2O95490 1459 aa8.37□□□□□ -1.07
CHD3-212ENST00000570758 FBXO41Q8TF61 875 aa8.36□□□□□ -1.07
CHD3-212ENST00000570758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHD3-212ENST00000570758 CEP152O94986 1710 aa8.36□□□□□ -1.07
CHD3-212ENST00000570758 ZC3H13Q5T200 1668 aaKnown RBP8.36□□□□□ -1.07
CHD3-212ENST00000570758 PRDM15P57071 1507 aaPredicted RBP8.35□□□□□ -1.07
CHD3-212ENST00000570758 ERVK-7P63135 1459 aa8.35□□□□□ -1.07
CHD3-212ENST00000570758 PLA2R1Q13018 1463 aa8.35□□□□□ -1.07
CHD3-212ENST00000570758 CERKQ8TCT0 537 aa8.35□□□□□ -1.07
CHD3-212ENST00000570758 DEPDC5O75140 1603 aa8.35□□□□□ -1.07
CHD3-212ENST00000570758 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
CHD3-212ENST00000570758 NLRP1Q9C000 1473 aa8.33□□□□□ -1.08
CHD3-212ENST00000570758 PKD2Q13563 968 aa8.33□□□□□ -1.08
CHD3-212ENST00000570758 ARHGAP31Q2M1Z3 1444 aa8.33□□□□□ -1.08
CHD3-212ENST00000570758 VWDEQ8N2E2 1590 aa8.33□□□□□ -1.08
CHD3-212ENST00000570758 ANKRD50Q9ULJ7 1429 aa8.32□□□□□ -1.08
CHD3-212ENST00000570758 LMTK2Q8IWU2 1503 aa8.32□□□□□ -1.08
CHD3-212ENST00000570758 KANK1Q14678 1352 aa8.32□□□□□ -1.08
CHD3-212ENST00000570758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.32□□□□□ -1.08
CHD3-212ENST00000570758 LTBP4Q8N2S1 1624 aa8.32□□□□□ -1.08
CHD3-212ENST00000570758 NEURL4Q96JN8 1562 aa8.31□□□□□ -1.08
CHD3-212ENST00000570758 CFAP65Q6ZU64 1925 aaKnown RBP8.31□□□□□ -1.08
CHD3-212ENST00000570758 ITGAEP38570 1179 aa8.31□□□□□ -1.08
CHD3-212ENST00000570758 THEMISQ8N1K5 641 aaPredicted RBP8.31□□□□□ -1.08
CHD3-212ENST00000570758 UGGT1Q9NYU2 1555 aa8.31□□□□□ -1.08
CHD3-212ENST00000570758 ZNF335Q9H4Z2 1342 aaPredicted RBP8.3□□□□□ -1.08
CHD3-212ENST00000570758 ROCK1Q13464 1354 aa8.3□□□□□ -1.08
CHD3-212ENST00000570758 ANKLE2Q86XL3 938 aa8.29□□□□□ -1.08
CHD3-212ENST00000570758 POLR1AO95602 1720 aaPredicted RBP8.29□□□□□ -1.08
CHD3-212ENST00000570758 EFCAB6Q5THR3 1501 aa8.29□□□□□ -1.08
CHD3-212ENST00000570758 RRBP1Q9P2E9 1410 aaKnown RBP8.29□□□□□ -1.08
CHD3-212ENST00000570758 UBR1Q8IWV7 1749 aa8.28□□□□□ -1.08
CHD3-212ENST00000570758 NPHP4O75161 1426 aaPredicted RBP8.28□□□□□ -1.08
CHD3-212ENST00000570758 NOS1P29475 1434 aa8.28□□□□□ -1.08
CHD3-212ENST00000570758 UNC13BO14795 1591 aa8.27□□□□□ -1.09
CHD3-212ENST00000570758 SYNMO15061 1565 aa8.27□□□□□ -1.09
CHD3-212ENST00000570758 MED14O60244 1454 aa8.27□□□□□ -1.09
CHD3-212ENST00000570758 IDI1Q13907 227 aa8.27□□□□□ -1.09
CHD3-212ENST00000570758 PIK3C2BO00750 1634 aa8.26□□□□□ -1.09
CHD3-212ENST00000570758 ARHGAP23Q9P227 1491 aa8.26□□□□□ -1.09
CHD3-212ENST00000570758 SLIT1O75093 1534 aa8.25□□□□□ -1.09
CHD3-212ENST00000570758 TET3O43151 1660 aa8.25□□□□□ -1.09
CHD3-212ENST00000570758 LTKP29376 864 aa8.25□□□□□ -1.09
CHD3-212ENST00000570758 IQSEC2Q5JU85 1478 aa8.25□□□□□ -1.09
CHD3-212ENST00000570758 SCAF11Q99590 1463 aaKnown RBP8.25□□□□□ -1.09
CHD3-212ENST00000570758 TXNDC2Q86VQ3 553 aa8.24□□□□□ -1.09
CHD3-212ENST00000570758 IQGAP3Q86VI3 1631 aa8.24□□□□□ -1.09
CHD3-212ENST00000570758 RPRD2Q5VT52 1461 aaKnown RBP8.24□□□□□ -1.09
CHD3-212ENST00000570758 IQGAP1P46940 1657 aa8.24□□□□□ -1.09
CHD3-212ENST00000570758 NUP155O75694 1391 aa8.23□□□□□ -1.09
CHD3-212ENST00000570758 TMEM2Q9UHN6 1383 aa8.23□□□□□ -1.09
CHD3-212ENST00000570758 STAG3Q9UJ98 1225 aa8.23□□□□□ -1.09
CHD3-212ENST00000570758 GCC2Q8IWJ2 1684 aa8.23□□□□□ -1.09
CHD3-212ENST00000570758 ADGRB3O60242 1522 aa8.23□□□□□ -1.09
CHD3-212ENST00000570758 NAIPQ13075 1403 aa8.22□□□□□ -1.09
CHD3-212ENST00000570758 E9PCH4 1651 aa8.22□□□□□ -1.09
CHD3-212ENST00000570758 SLC52A1Q9NWF4 448 aa8.22□□□□□ -1.09
CHD3-212ENST00000570758 CPS1P31327 1500 aa8.22□□□□□ -1.09
CHD3-212ENST00000570758 KDM5AP29375 1690 aaKnown RBP8.21□□□□□ -1.09
CHD3-212ENST00000570758 STRCP1A6NGW2 1772 aa8.21□□□□□ -1.1
CHD3-212ENST00000570758 UBAP1LF5GYI3 381 aa8.21□□□□□ -1.1
CHD3-212ENST00000570758 EID1Q9Y6B2 187 aa8.21□□□□□ -1.1
CHD3-212ENST00000570758 TMEM131LA2VDJ0 1609 aa8.2□□□□□ -1.1
CHD3-212ENST00000570758 MYO5BQ9ULV0 1848 aa8.19□□□□□ -1.1
CHD3-212ENST00000570758 HFM1A2PYH4 1435 aa8.19□□□□□ -1.1
CHD3-212ENST00000570758 ZFYVE9O95405 1425 aa8.19□□□□□ -1.1
CHD3-212ENST00000570758 RIMS2Q9UQ26 1411 aa8.19□□□□□ -1.1
CHD3-212ENST00000570758 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
CHD3-212ENST00000570758 CHGAP10645 457 aaKnown RBP8.18□□□□□ -1.1
CHD3-212ENST00000570758 SLC26A8Q96RN1 970 aa8.18□□□□□ -1.1
CHD3-212ENST00000570758 SENP3Q9H4L4 574 aaPredicted RBP8.18□□□□□ -1.1
CHD3-212ENST00000570758 ALKQ9UM73 1620 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms