RNA–Protein interactions for RNA: ENST00000570692.1

TVP23A-203, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 4

Gene TVP23A, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-203ENST00000570692 TNRQ92752 1358 aa25.05■■□□□ 1.6
TVP23A-203ENST00000570692 POLR1AO95602 1720 aaPredicted RBP25.05■■□□□ 1.6
TVP23A-203ENST00000570692 ADGBQ8N7X0 1667 aa25.04■■□□□ 1.6
TVP23A-203ENST00000570692 SENP3Q9H4L4 574 aaPredicted RBP25.03■■□□□ 1.6
TVP23A-203ENST00000570692 ALKQ9UM73 1620 aa25.03■■□□□ 1.6
TVP23A-203ENST00000570692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.03■■□□□ 1.6
TVP23A-203ENST00000570692 VWDEQ8N2E2 1590 aa25.02■■□□□ 1.6
TVP23A-203ENST00000570692 ANKLE2Q86XL3 938 aa25.02■■□□□ 1.6
TVP23A-203ENST00000570692 DHX29Q7Z478 1369 aaKnown RBP25■■□□□ 1.59
TVP23A-203ENST00000570692 MBD5Q9P267 1494 aa24.98■■□□□ 1.59
TVP23A-203ENST00000570692 KIF3BO15066 747 aa24.98■■□□□ 1.59
TVP23A-203ENST00000570692 PZPP20742 1482 aa24.97■■□□□ 1.59
TVP23A-203ENST00000570692 THEMISQ8N1K5 641 aaPredicted RBP24.96■■□□□ 1.59
TVP23A-203ENST00000570692 NPHP4O75161 1426 aaPredicted RBP24.95■■□□□ 1.59
TVP23A-203ENST00000570692 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
TVP23A-203ENST00000570692 RTEL1-TNFRSF6BF6WH68 1400 aa24.95■■□□□ 1.58
TVP23A-203ENST00000570692 MTUS2Q5JR59 1369 aa24.94■■□□□ 1.58
TVP23A-203ENST00000570692 WASHC2CQ9Y4E1 1318 aa24.93■■□□□ 1.58
TVP23A-203ENST00000570692 KDM5DQ9BY66 1539 aa24.93■■□□□ 1.58
TVP23A-203ENST00000570692 MIA2Q96PC5 1412 aa24.93■■□□□ 1.58
TVP23A-203ENST00000570692 MED14O60244 1454 aa24.92■■□□□ 1.58
TVP23A-203ENST00000570692 TIAM1Q13009 1591 aa24.91■■□□□ 1.58
TVP23A-203ENST00000570692 UGGT1Q9NYU2 1555 aa24.9■■□□□ 1.58
TVP23A-203ENST00000570692 NLRP1Q9C000 1473 aa24.89■■□□□ 1.57
TVP23A-203ENST00000570692 LRRC7Q96NW7 1537 aa24.88■■□□□ 1.57
TVP23A-203ENST00000570692 FAM135AQ9P2D6 1515 aa24.88■■□□□ 1.57
TVP23A-203ENST00000570692 DEPDC5O75140 1603 aa24.88■■□□□ 1.57
TVP23A-203ENST00000570692 RGS17Q9UGC6 210 aaPredicted RBP24.87■■□□□ 1.57
TVP23A-203ENST00000570692 STRCP1A6NGW2 1772 aa24.85■■□□□ 1.57
TVP23A-203ENST00000570692 IQGAP1P46940 1657 aa24.85■■□□□ 1.57
TVP23A-203ENST00000570692 RNF17Q9BXT8 1623 aaKnown RBP24.81■■□□□ 1.56
TVP23A-203ENST00000570692 CCDC141Q6ZP82 1450 aa24.81■■□□□ 1.56
TVP23A-203ENST00000570692 EHBP1L1Q8N3D4 1523 aa24.78■■□□□ 1.56
TVP23A-203ENST00000570692 CEP162Q5TB80 1403 aa24.77■■□□□ 1.56
TVP23A-203ENST00000570692 SYNMO15061 1565 aa24.76■■□□□ 1.55
TVP23A-203ENST00000570692 CAMSAP2Q08AD1 1489 aa24.75■■□□□ 1.55
TVP23A-203ENST00000570692 RSPH4AQ5TD94 716 aa24.72■■□□□ 1.55
TVP23A-203ENST00000570692 ZC3H13Q5T200 1668 aaKnown RBP24.71■■□□□ 1.55
TVP23A-203ENST00000570692 ABCC3O15438 1527 aa24.71■■□□□ 1.55
TVP23A-203ENST00000570692 ERVK-7P63135 1459 aa24.7■■□□□ 1.54
TVP23A-203ENST00000570692 POTEAQ6S8J7 498 aa24.69■■□□□ 1.54
TVP23A-203ENST00000570692 NCOA2Q15596 1464 aa24.68■■□□□ 1.54
TVP23A-203ENST00000570692 TSPY4P0CV99 314 aa24.67■■□□□ 1.54
TVP23A-203ENST00000570692 TSPY10P0CW01 314 aa24.67■■□□□ 1.54
TVP23A-203ENST00000570692 LTKP29376 864 aa24.67■■□□□ 1.54
TVP23A-203ENST00000570692 SCAF11Q99590 1463 aaKnown RBP24.66■■□□□ 1.54
TVP23A-203ENST00000570692 TXNDC2Q86VQ3 553 aa24.64■■□□□ 1.54
TVP23A-203ENST00000570692 UBR1Q8IWV7 1749 aa24.64■■□□□ 1.53
TVP23A-203ENST00000570692 ARHGEF5Q12774 1597 aa24.63■■□□□ 1.53
TVP23A-203ENST00000570692 XIRP1Q702N8 1843 aaKnown RBP24.61■■□□□ 1.53
TVP23A-203ENST00000570692 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
TVP23A-203ENST00000570692 ARHGAP23Q9P227 1491 aa24.59■■□□□ 1.53
TVP23A-203ENST00000570692 MROH1Q8NDA8 1641 aa24.58■■□□□ 1.53
TVP23A-203ENST00000570692 SLIT1O75093 1534 aa24.57■■□□□ 1.52
TVP23A-203ENST00000570692 EID1Q9Y6B2 187 aa24.55■■□□□ 1.52
TVP23A-203ENST00000570692 CEP152O94986 1710 aa24.55■■□□□ 1.52
TVP23A-203ENST00000570692 TMEM94Q12767 1356 aa24.54■■□□□ 1.52
TVP23A-203ENST00000570692 RBM33Q96EV2 1170 aaKnown RBP24.53■■□□□ 1.52
TVP23A-203ENST00000570692 EIF2AK4Q9P2K8 1649 aaKnown RBP24.53■■□□□ 1.52
TVP23A-203ENST00000570692 CFAP65Q6ZU64 1925 aaKnown RBP24.53■■□□□ 1.52
TVP23A-203ENST00000570692 MAST1Q9Y2H9 1570 aa24.52■■□□□ 1.52
TVP23A-203ENST00000570692 ROBO1Q9Y6N7 1651 aa24.49■■□□□ 1.51
TVP23A-203ENST00000570692 TMEM2Q9UHN6 1383 aa24.48■■□□□ 1.51
TVP23A-203ENST00000570692 SETD1AO15047 1707 aaKnown RBP24.47■■□□□ 1.51
TVP23A-203ENST00000570692 PROSER2Q86WR7 435 aaPredicted RBP24.47■■□□□ 1.51
TVP23A-203ENST00000570692 KCNA6P17658 529 aa24.46■■□□□ 1.51
TVP23A-203ENST00000570692 MAP3K1Q13233 1512 aa24.45■■□□□ 1.51
TVP23A-203ENST00000570692 ARHGAP31Q2M1Z3 1444 aa24.45■■□□□ 1.51
TVP23A-203ENST00000570692 SLC26A8Q96RN1 970 aa24.45■■□□□ 1.5
TVP23A-203ENST00000570692 PIK3C2BO00750 1634 aa24.45■■□□□ 1.5
TVP23A-203ENST00000570692 STAG3Q9UJ98 1225 aa24.44■■□□□ 1.5
TVP23A-203ENST00000570692 DUOX2Q9NRD8 1548 aa24.42■■□□□ 1.5
TVP23A-203ENST00000570692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.41■■□□□ 1.5
TVP23A-203ENST00000570692 PRDM15P57071 1507 aaPredicted RBP24.4■■□□□ 1.5
TVP23A-203ENST00000570692 LRRC9Q6ZRR7 1453 aa24.39■■□□□ 1.5
TVP23A-203ENST00000570692 TET3O43151 1660 aa24.38■■□□□ 1.49
TVP23A-203ENST00000570692 IDI1Q13907 227 aa24.38■■□□□ 1.49
TVP23A-203ENST00000570692 EFCAB6Q5THR3 1501 aa24.37■■□□□ 1.49
TVP23A-203ENST00000570692 SLAIN2Q9P270 581 aa24.37■■□□□ 1.49
TVP23A-203ENST00000570692 KIF15Q9NS87 1388 aa24.37■■□□□ 1.49
TVP23A-203ENST00000570692 RRP7BPQ9NSQ0 103 aa24.36■■□□□ 1.49
TVP23A-203ENST00000570692 JCADQ9P266 1359 aa24.36■■□□□ 1.49
TVP23A-203ENST00000570692 MSH6P52701 1360 aa24.34■■□□□ 1.49
TVP23A-203ENST00000570692 PHLPP1O60346 1717 aa24.34■■□□□ 1.49
TVP23A-203ENST00000570692 MYOM3Q5VTT5 1437 aa24.34■■□□□ 1.49
TVP23A-203ENST00000570692 UPF1Q92900 1129 aaKnown RBP eCLIP24.33■■□□□ 1.49
TVP23A-203ENST00000570692 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
TVP23A-203ENST00000570692 KANK4Q5T7N3 995 aaPredicted RBP24.32■■□□□ 1.48
TVP23A-203ENST00000570692 ERBINQ96RT1 1412 aa24.32■■□□□ 1.48
TVP23A-203ENST00000570692 NWD1Q149M9 1564 aa24.31■■□□□ 1.48
TVP23A-203ENST00000570692 BCANQ96GW7 911 aa24.31■■□□□ 1.48
TVP23A-203ENST00000570692 KDM5AP29375 1690 aaKnown RBP24.3■■□□□ 1.48
TVP23A-203ENST00000570692 TRIM52Q96A61 297 aa24.29■■□□□ 1.48
TVP23A-203ENST00000570692 KANK1Q14678 1352 aa24.29■■□□□ 1.48
TVP23A-203ENST00000570692 LRP6O75581 1613 aa24.28■■□□□ 1.48
TVP23A-203ENST00000570692 ABCC5O15440 1437 aa24.27■■□□□ 1.48
TVP23A-203ENST00000570692 COL16A1Q07092 1604 aaPredicted RBP24.26■■□□□ 1.47
TVP23A-203ENST00000570692 MEX3CQ5U5Q3 659 aaKnown RBP24.25■■□□□ 1.47
TVP23A-203ENST00000570692 ADGRB3O60242 1522 aa24.24■■□□□ 1.47
TVP23A-203ENST00000570692 ZNF772Q68DY9 489 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms