RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	TIAM1	Q13009	1591 aa		13.49	□□□□□ -0.25
SCAPER-223	ENST00000569784	A2M	P01023	1474 aa		13.48	□□□□□ -0.25
SCAPER-223	ENST00000569784	ADGB	Q8N7X0	1667 aa		13.48	□□□□□ -0.25
SCAPER-223	ENST00000569784	CLTC	Q00610	1675 aa	Known RBP	13.47	□□□□□ -0.25
SCAPER-223	ENST00000569784	CERK	Q8TCT0	537 aa		13.47	□□□□□ -0.25
SCAPER-223	ENST00000569784	MROH2A	A6NES4	1674 aa		13.47	□□□□□ -0.25
SCAPER-223	ENST00000569784	INO80	Q9ULG1	1556 aa	Predicted RBP	13.46	□□□□□ -0.25
SCAPER-223	ENST00000569784	ZNF644	Q9H582	1327 aa	Predicted RBP	13.45	□□□□□ -0.26
SCAPER-223	ENST00000569784	LOC105371045	A0A1W2PR82	267 aa		13.45	□□□□□ -0.26
SCAPER-223	ENST00000569784	ZMYM3	Q14202	1370 aa		13.45	□□□□□ -0.26
SCAPER-223	ENST00000569784	TSPY4	P0CV99	314 aa		13.44	□□□□□ -0.26
SCAPER-223	ENST00000569784	TSPY10	P0CW01	314 aa		13.44	□□□□□ -0.26
SCAPER-223	ENST00000569784	NCOA2	Q15596	1464 aa		13.43	□□□□□ -0.26
SCAPER-223	ENST00000569784	RSPH4A	Q5TD94	716 aa		13.43	□□□□□ -0.26
SCAPER-223	ENST00000569784	STRC	Q7RTU9	1775 aa		13.43	□□□□□ -0.26
SCAPER-223	ENST00000569784	MKRN4P	Q13434	485 aa	Predicted RBP	13.42	□□□□□ -0.26
SCAPER-223	ENST00000569784	CAMSAP2	Q08AD1	1489 aa		13.42	□□□□□ -0.26
SCAPER-223	ENST00000569784	KIF3B	O15066	747 aa		13.41	□□□□□ -0.26
SCAPER-223	ENST00000569784	CCDC141	Q6ZP82	1450 aa		13.41	□□□□□ -0.26
SCAPER-223	ENST00000569784	NPAT	Q14207	1427 aa		13.4	□□□□□ -0.26
SCAPER-223	ENST00000569784	VPS8	Q8N3P4	1428 aa		13.4	□□□□□ -0.26
SCAPER-223	ENST00000569784	PLXNC1	O60486	1568 aa		13.4	□□□□□ -0.26
SCAPER-223	ENST00000569784	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.39	□□□□□ -0.27
SCAPER-223	ENST00000569784	CAMSAP1	Q5T5Y3	1602 aa		13.39	□□□□□ -0.27
SCAPER-223	ENST00000569784	PTPRT	O14522	1441 aa		13.38	□□□□□ -0.27
SCAPER-223	ENST00000569784	WASHC2C	Q9Y4E1	1318 aa		13.38	□□□□□ -0.27
SCAPER-223	ENST00000569784	MBD5	Q9P267	1494 aa		13.37	□□□□□ -0.27
SCAPER-223	ENST00000569784	DHX29	Q7Z478	1369 aa	Known RBP	13.37	□□□□□ -0.27
SCAPER-223	ENST00000569784	MYO3A	Q8NEV4	1616 aa		13.37	□□□□□ -0.27
SCAPER-223	ENST00000569784	LRRC9	Q6ZRR7	1453 aa		13.36	□□□□□ -0.27
SCAPER-223	ENST00000569784	NCOA1	Q15788	1441 aa		13.35	□□□□□ -0.27
SCAPER-223	ENST00000569784	NCKAP5L	Q9HCH0	1330 aa		13.35	□□□□□ -0.27
SCAPER-223	ENST00000569784	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.34	□□□□□ -0.27
SCAPER-223	ENST00000569784	PKD2	Q13563	968 aa		13.33	□□□□□ -0.28
SCAPER-223	ENST00000569784	ZNF142	P52746	1687 aa	Predicted RBP	13.33	□□□□□ -0.28
SCAPER-223	ENST00000569784	KDM5D	Q9BY66	1539 aa		13.33	□□□□□ -0.28
SCAPER-223	ENST00000569784	ARHGEF5	Q12774	1597 aa		13.32	□□□□□ -0.28
SCAPER-223	ENST00000569784	PTPRK	Q15262	1439 aa		13.32	□□□□□ -0.28
SCAPER-223	ENST00000569784	KANK4	Q5T7N3	995 aa	Predicted RBP	13.3	□□□□□ -0.28
SCAPER-223	ENST00000569784	TNR	Q92752	1358 aa		13.3	□□□□□ -0.28
SCAPER-223	ENST00000569784	MAP3K1	Q13233	1512 aa		13.29	□□□□□ -0.28
SCAPER-223	ENST00000569784	MYOM3	Q5VTT5	1437 aa		13.29	□□□□□ -0.28
SCAPER-223	ENST00000569784	A2ML1	A8K2U0	1454 aa		13.29	□□□□□ -0.28
SCAPER-223	ENST00000569784	FAM135A	Q9P2D6	1515 aa		13.29	□□□□□ -0.28
SCAPER-223	ENST00000569784	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.28	□□□□□ -0.28
SCAPER-223	ENST00000569784	MIA2	Q96PC5	1412 aa		13.28	□□□□□ -0.28
SCAPER-223	ENST00000569784	PLA2R1	Q13018	1463 aa		13.28	□□□□□ -0.28
SCAPER-223	ENST00000569784	POLR1A	O95602	1720 aa	Predicted RBP	13.27	□□□□□ -0.29
SCAPER-223	ENST00000569784	PZP	P20742	1482 aa		13.26	□□□□□ -0.29
SCAPER-223	ENST00000569784	DNMT1	P26358	1616 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-223	ENST00000569784	ANKLE2	Q86XL3	938 aa		13.26	□□□□□ -0.29
SCAPER-223	ENST00000569784	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-223	ENST00000569784	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-223	ENST00000569784	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-223	ENST00000569784	ZC3H13	Q5T200	1668 aa	Known RBP	13.25	□□□□□ -0.29
SCAPER-223	ENST00000569784	MAST1	Q9Y2H9	1570 aa		13.25	□□□□□ -0.29
SCAPER-223	ENST00000569784	UBAP1L	F5GYI3	381 aa		13.25	□□□□□ -0.29
SCAPER-223	ENST00000569784	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-223	ENST00000569784	CFAP65	Q6ZU64	1925 aa	Known RBP	13.24	□□□□□ -0.29
SCAPER-223	ENST00000569784	RRP7BP	Q9NSQ0	103 aa		13.24	□□□□□ -0.29
SCAPER-223	ENST00000569784	PTPN23	Q9H3S7	1636 aa		13.24	□□□□□ -0.29
SCAPER-223	ENST00000569784	IQSEC2	Q5JU85	1478 aa		13.23	□□□□□ -0.29
SCAPER-223	ENST00000569784	DISP3	Q9P2K9	1392 aa		13.23	□□□□□ -0.29
SCAPER-223	ENST00000569784	LTBP4	Q8N2S1	1624 aa		13.23	□□□□□ -0.29
SCAPER-223	ENST00000569784	UGGT1	Q9NYU2	1555 aa		13.23	□□□□□ -0.29
SCAPER-223	ENST00000569784	DUOX2	Q9NRD8	1548 aa		13.23	□□□□□ -0.29
SCAPER-223	ENST00000569784	CEP152	O94986	1710 aa		13.22	□□□□□ -0.29
SCAPER-223	ENST00000569784	TCOF1	Q13428	1488 aa	Known RBP	13.22	□□□□□ -0.29
SCAPER-223	ENST00000569784	NLRP1	Q9C000	1473 aa		13.22	□□□□□ -0.29
SCAPER-223	ENST00000569784	KANK1	Q14678	1352 aa		13.21	□□□□□ -0.29
SCAPER-223	ENST00000569784	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
SCAPER-223	ENST00000569784	RNF17	Q9BXT8	1623 aa	Known RBP	13.21	□□□□□ -0.29
SCAPER-223	ENST00000569784	STAG3	Q9UJ98	1225 aa		13.21	□□□□□ -0.29
SCAPER-223	ENST00000569784	CHIC2	Q9UKJ5	165 aa		13.21	□□□□□ -0.29
SCAPER-223	ENST00000569784	CROCC2	H7BZ55	1655 aa		13.21	□□□□□ -0.3
SCAPER-223	ENST00000569784	KIF15	Q9NS87	1388 aa		13.2	□□□□□ -0.3
SCAPER-223	ENST00000569784	FAM50A	Q14320	339 aa	Known RBP	13.2	□□□□□ -0.3
SCAPER-223	ENST00000569784	ABCC3	O15438	1527 aa		13.19	□□□□□ -0.3
SCAPER-223	ENST00000569784	ANKRD30A	Q9BXX3	1397 aa		13.18	□□□□□ -0.3
SCAPER-223	ENST00000569784	DAPK1	P53355	1430 aa		13.17	□□□□□ -0.3
SCAPER-223	ENST00000569784	TOM1	O60784	492 aa		13.17	□□□□□ -0.3
SCAPER-223	ENST00000569784	PIP4K2B	P78356	416 aa		13.17	□□□□□ -0.3
SCAPER-223	ENST00000569784	SHANK2	Q9UPX8	1470 aa		13.16	□□□□□ -0.3
SCAPER-223	ENST00000569784	NPHP4	O75161	1426 aa	Predicted RBP	13.16	□□□□□ -0.3
SCAPER-223	ENST00000569784	FGD6	Q6ZV73	1430 aa		13.16	□□□□□ -0.3
SCAPER-223	ENST00000569784	ERBIN	Q96RT1	1412 aa		13.16	□□□□□ -0.3
SCAPER-223	ENST00000569784	ERVK-7	P63135	1459 aa		13.16	□□□□□ -0.3
SCAPER-223	ENST00000569784	ABCC5	O15440	1437 aa		13.15	□□□□□ -0.3
SCAPER-223	ENST00000569784	CPS1	P31327	1500 aa		13.15	□□□□□ -0.3
SCAPER-223	ENST00000569784	EID1	Q9Y6B2	187 aa		13.15	□□□□□ -0.3
SCAPER-223	ENST00000569784	SPATA31D1	Q6ZQQ2	1576 aa		13.15	□□□□□ -0.3
SCAPER-223	ENST00000569784	IQGAP1	P46940	1657 aa		13.15	□□□□□ -0.31
SCAPER-223	ENST00000569784	DEPDC5	O75140	1603 aa		13.13	□□□□□ -0.31
SCAPER-223	ENST00000569784	NEURL4	Q96JN8	1562 aa		13.13	□□□□□ -0.31
SCAPER-223	ENST00000569784	BCAN	Q96GW7	911 aa		13.12	□□□□□ -0.31
SCAPER-223	ENST00000569784	MROH1	Q8NDA8	1641 aa		13.12	□□□□□ -0.31
SCAPER-223	ENST00000569784	TXNDC2	Q86VQ3	553 aa		13.11	□□□□□ -0.31
SCAPER-223	ENST00000569784	PRDM15	P57071	1507 aa	Predicted RBP	13.11	□□□□□ -0.31
SCAPER-223	ENST00000569784	UBR1	Q8IWV7	1749 aa		13.1	□□□□□ -0.31
SCAPER-223	ENST00000569784	MED14	O60244	1454 aa		13.09	□□□□□ -0.31

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