RNA–Protein interactions for RNA: ENST00000569768.1

THUMPD1-204, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-204ENST00000569768 ATP10AO60312 1499 aa21.84■■□□□ 1.09
THUMPD1-204ENST00000569768 AGLP35573 1532 aa21.81■■□□□ 1.08
THUMPD1-204ENST00000569768 RNF17Q9BXT8 1623 aaKnown RBP21.81■■□□□ 1.08
THUMPD1-204ENST00000569768 PRDM15P57071 1507 aaPredicted RBP21.8■■□□□ 1.08
THUMPD1-204ENST00000569768 PZPP20742 1482 aa21.78■■□□□ 1.08
THUMPD1-204ENST00000569768 IQGAP3Q86VI3 1631 aa21.78■■□□□ 1.08
THUMPD1-204ENST00000569768 VWDEQ8N2E2 1590 aa21.78■■□□□ 1.08
THUMPD1-204ENST00000569768 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.08
THUMPD1-204ENST00000569768 TRIM52Q96A61 297 aa21.76■■□□□ 1.07
THUMPD1-204ENST00000569768 MROH1Q8NDA8 1641 aa21.76■■□□□ 1.07
THUMPD1-204ENST00000569768 NUP155O75694 1391 aa21.75■■□□□ 1.07
THUMPD1-204ENST00000569768 FAM135AQ9P2D6 1515 aa21.74■■□□□ 1.07
THUMPD1-204ENST00000569768 MPHOSPH9Q99550 1183 aa21.73■■□□□ 1.07
THUMPD1-204ENST00000569768 KIF3BO15066 747 aa21.72■■□□□ 1.07
THUMPD1-204ENST00000569768 LMTK2Q8IWU2 1503 aa21.71■■□□□ 1.07
THUMPD1-204ENST00000569768 KANK1Q14678 1352 aa21.71■■□□□ 1.07
THUMPD1-204ENST00000569768 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
THUMPD1-204ENST00000569768 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
THUMPD1-204ENST00000569768 TET3O43151 1660 aa21.66■■□□□ 1.06
THUMPD1-204ENST00000569768 ZC3H13Q5T200 1668 aaKnown RBP21.66■■□□□ 1.06
THUMPD1-204ENST00000569768 ZEB1P37275 1124 aaPredicted RBP21.64■■□□□ 1.05
THUMPD1-204ENST00000569768 SIGLEC1Q9BZZ2 1709 aa21.63■■□□□ 1.05
THUMPD1-204ENST00000569768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.054e-12■□□□□ 11.2
THUMPD1-204ENST00000569768 ABCC3O15438 1527 aa21.61■■□□□ 1.05
THUMPD1-204ENST00000569768 ANKRD30BQ9BXX2 1392 aa21.61■■□□□ 1.05
THUMPD1-204ENST00000569768 EFCAB6Q5THR3 1501 aa21.6■■□□□ 1.05
THUMPD1-204ENST00000569768 PKD2Q13563 968 aa21.6■■□□□ 1.05
THUMPD1-204ENST00000569768 RPRD2Q5VT52 1461 aaKnown RBP21.59■■□□□ 1.05
THUMPD1-204ENST00000569768 ARHGAP31Q2M1Z3 1444 aa21.58■■□□□ 1.05
THUMPD1-204ENST00000569768 GGT6Q6P531 493 aa21.58■■□□□ 1.05
THUMPD1-204ENST00000569768 CEP152O94986 1710 aa21.57■■□□□ 1.04
THUMPD1-204ENST00000569768 E9PCH4 1651 aa21.56■■□□□ 1.04
THUMPD1-204ENST00000569768 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
THUMPD1-204ENST00000569768 PTPRTO14522 1441 aa21.54■■□□□ 1.04
THUMPD1-204ENST00000569768 WASHC2CQ9Y4E1 1318 aa21.54■■□□□ 1.04
THUMPD1-204ENST00000569768 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
THUMPD1-204ENST00000569768 CNTLNQ9NXG0 1405 aa21.51■■□□□ 1.03
THUMPD1-204ENST00000569768 TRPM2O94759 1503 aa21.5■■□□□ 1.03
THUMPD1-204ENST00000569768 NPATQ14207 1427 aa21.49■■□□□ 1.03
THUMPD1-204ENST00000569768 PLA2R1Q13018 1463 aa21.49■■□□□ 1.03
THUMPD1-204ENST00000569768 SPHKAPQ2M3C7 1700 aa21.49■■□□□ 1.03
THUMPD1-204ENST00000569768 FOXD1Q16676 465 aa21.48■■□□□ 1.03
THUMPD1-204ENST00000569768 MROH2AA6NES4 1674 aa21.47■■□□□ 1.03
THUMPD1-204ENST00000569768 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
THUMPD1-204ENST00000569768 NOS1P29475 1434 aa21.45■■□□□ 1.02
THUMPD1-204ENST00000569768 CLTCQ00610 1675 aaKnown RBP21.44■■□□□ 1.02
THUMPD1-204ENST00000569768 SIN3AQ96ST3 1273 aa21.44■■□□□ 1.02
THUMPD1-204ENST00000569768 CCDC144AA2RUR9 1427 aa21.44■■□□□ 1.02
THUMPD1-204ENST00000569768 NEURL4Q96JN8 1562 aa21.43■■□□□ 1.02
THUMPD1-204ENST00000569768 ESF1Q9H501 851 aaKnown RBP21.4■■□□□ 1.02
THUMPD1-204ENST00000569768 MLECQ14165 292 aa21.39■■□□□ 1.01
THUMPD1-204ENST00000569768 PREX1Q8TCU6 1659 aa21.39■■□□□ 1.01
THUMPD1-204ENST00000569768 SPATA31D1Q6ZQQ2 1576 aa21.39■■□□□ 1.01
THUMPD1-204ENST00000569768 TONSLQ96HA7 1378 aa21.38■■□□□ 1.01
THUMPD1-204ENST00000569768 FER1L4A9Z1Z3 1794 aa21.38■■□□□ 1.01
THUMPD1-204ENST00000569768 ERVK-7P63135 1459 aa21.38■■□□□ 1.01
THUMPD1-204ENST00000569768 ADAMTSL3P82987 1691 aa21.37■■□□□ 1.01
THUMPD1-204ENST00000569768 ZMYM3Q14202 1370 aa21.37■■□□□ 1.01
THUMPD1-204ENST00000569768 PIK3C2BO00750 1634 aa21.37■■□□□ 1.01
THUMPD1-204ENST00000569768 CLTCL1P53675 1640 aa21.37■■□□□ 1.01
THUMPD1-204ENST00000569768 NEUROD1Q13562 356 aa21.36■■□□□ 1.01
THUMPD1-204ENST00000569768 SYNMO15061 1565 aa21.35■■□□□ 1.01
THUMPD1-204ENST00000569768 SPATA31E1Q6ZUB1 1445 aa21.32■■□□□ 1
THUMPD1-204ENST00000569768 SLC52A1Q9NWF4 448 aa21.32■■□□□ 1
THUMPD1-204ENST00000569768 MADDQ8WXG6 1647 aa21.3■■□□□ 1
THUMPD1-204ENST00000569768 C3P01024 1663 aa21.28■■□□□ 1
THUMPD1-204ENST00000569768 KIF1BO60333 1816 aa21.28■■□□□ 1
THUMPD1-204ENST00000569768 ADGRB3O60242 1522 aa21.28■■□□□ 1
THUMPD1-204ENST00000569768 STAC3Q96MF2 364 aa21.27■■□□□ 1
THUMPD1-204ENST00000569768 UGGT1Q9NYU2 1555 aa21.27■□□□□ 0.99
THUMPD1-204ENST00000569768 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
THUMPD1-204ENST00000569768 L3MBTL2Q969R5 705 aa21.25■□□□□ 0.99
THUMPD1-204ENST00000569768 CFAP65Q6ZU64 1925 aaKnown RBP21.25■□□□□ 0.99
THUMPD1-204ENST00000569768 RIMS1Q86UR5 1692 aaKnown RBP21.24■□□□□ 0.99
THUMPD1-204ENST00000569768 FBXO31Q5XUX0 539 aaPredicted RBP21.24■□□□□ 0.99
THUMPD1-204ENST00000569768 KDM5AP29375 1690 aaKnown RBP21.23■□□□□ 0.99
THUMPD1-204ENST00000569768 TNRQ92752 1358 aa21.23■□□□□ 0.99
THUMPD1-204ENST00000569768 UHRF1BP1Q6BDS2 1440 aa21.22■□□□□ 0.99
THUMPD1-204ENST00000569768 NLRP1Q9C000 1473 aa21.22■□□□□ 0.99
THUMPD1-204ENST00000569768 IDI1Q13907 227 aa21.2■□□□□ 0.98
THUMPD1-204ENST00000569768 RPGRIP1LQ68CZ1 1315 aa21.2■□□□□ 0.98
THUMPD1-204ENST00000569768 TMEM131LA2VDJ0 1609 aa21.19■□□□□ 0.98
THUMPD1-204ENST00000569768 MYOM2P54296 1465 aa21.18■□□□□ 0.98
THUMPD1-204ENST00000569768 IFT172Q9UG01 1749 aa21.17■□□□□ 0.98
THUMPD1-204ENST00000569768 PTPRMP28827 1452 aa21.14■□□□□ 0.98
THUMPD1-204ENST00000569768 A2ML1A8K2U0 1454 aa21.13■□□□□ 0.97
THUMPD1-204ENST00000569768 RGL3Q3MIN7 710 aa21.13■□□□□ 0.97
THUMPD1-204ENST00000569768 ZFYVE9O95405 1425 aa21.12■□□□□ 0.97
THUMPD1-204ENST00000569768 PRAG1Q86YV5 1406 aa21.12■□□□□ 0.97
THUMPD1-204ENST00000569768 CEBPAP49715 358 aaPredicted RBP21.12■□□□□ 0.97
THUMPD1-204ENST00000569768 DCAF11Q8TEB1 546 aa21.12■□□□□ 0.97
THUMPD1-204ENST00000569768 PPLO60437 1756 aa21.12■□□□□ 0.97
THUMPD1-204ENST00000569768 NRXN1Q9ULB1 1477 aa21.12■□□□□ 0.97
THUMPD1-204ENST00000569768 NEXMIFQ5QGS0 1516 aa21.11■□□□□ 0.97
THUMPD1-204ENST00000569768 MYO3AQ8NEV4 1616 aa21.11■□□□□ 0.97
THUMPD1-204ENST00000569768 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
THUMPD1-204ENST00000569768 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
THUMPD1-204ENST00000569768 RALGAPBQ86X10 1494 aa21.09■□□□□ 0.97
THUMPD1-204ENST00000569768 ZNF142P52746 1687 aaPredicted RBP21.09■□□□□ 0.97
THUMPD1-204ENST00000569768 CHGAP10645 457 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms