RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
LINC00556-201ENST00000569603 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
LINC00556-201ENST00000569603 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
LINC00556-201ENST00000569603 SLC34A2O95436 690 aa11.04□□□□□ -0.64
LINC00556-201ENST00000569603 TOP2BQ02880 1626 aa11.04□□□□□ -0.64
LINC00556-201ENST00000569603 MYT1LQ9UL68 1186 aa11.03□□□□□ -0.64
LINC00556-201ENST00000569603 SUPT5HO00267 1087 aaKnown RBP11.02□□□□□ -0.65
LINC00556-201ENST00000569603 LHX6Q9UPM6 363 aa11.02□□□□□ -0.65
LINC00556-201ENST00000569603 WRNQ14191 1432 aaPredicted RBP eCLIP11.01□□□□□ -0.65
LINC00556-201ENST00000569603 ADAMTS12P58397 1594 aa11□□□□□ -0.65
LINC00556-201ENST00000569603 POTEEQ6S8J3 1075 aa11□□□□□ -0.65
LINC00556-201ENST00000569603 ANKRD13DQ6ZTN6 518 aa11□□□□□ -0.65
LINC00556-201ENST00000569603 CHMP7Q8WUX9 453 aaPredicted RBP11□□□□□ -0.65
LINC00556-201ENST00000569603 LSM11P83369 360 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00556-201ENST00000569603 NUP160Q12769 1436 aa10.99□□□□□ -0.65
LINC00556-201ENST00000569603 GRIN2AQ12879 1464 aa10.99□□□□□ -0.65
LINC00556-201ENST00000569603 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
LINC00556-201ENST00000569603 CEP170Q5SW79 1584 aa10.97□□□□□ -0.65
LINC00556-201ENST00000569603 SHROOM2Q13796 1616 aa10.96□□□□□ -0.65
LINC00556-201ENST00000569603 NKX1-1Q15270 411 aaPredicted RBP10.96□□□□□ -0.65
LINC00556-201ENST00000569603 AXIN2Q9Y2T1 843 aa10.96□□□□□ -0.65
LINC00556-201ENST00000569603 ERCC6L2Q5T890 1561 aa10.95□□□□□ -0.66
LINC00556-201ENST00000569603 ERICH3Q5RHP9 1530 aa10.95□□□□□ -0.66
LINC00556-201ENST00000569603 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
LINC00556-201ENST00000569603 FOXK1P85037 733 aa10.94□□□□□ -0.66
LINC00556-201ENST00000569603 PLPP6Q8IY26 295 aa10.94□□□□□ -0.66
LINC00556-201ENST00000569603 FHAD1B1AJZ9 1412 aa10.93□□□□□ -0.66
LINC00556-201ENST00000569603 PBX2P40425 430 aa10.93□□□□□ -0.66
LINC00556-201ENST00000569603 PTGER2P43116 358 aa10.93□□□□□ -0.66
LINC00556-201ENST00000569603 GPHNQ9NQX3 736 aaPredicted RBP10.93□□□□□ -0.66
LINC00556-201ENST00000569603 DSG2Q14126 1118 aa10.92□□□□□ -0.66
LINC00556-201ENST00000569603 PTCD2Q8WV60 388 aaKnown RBP10.92□□□□□ -0.66
LINC00556-201ENST00000569603 RUSC2Q8N2Y8 1516 aa10.85□□□□□ -0.67
LINC00556-201ENST00000569603 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
LINC00556-201ENST00000569603 ARHGAP33O14559 1287 aa10.83□□□□□ -0.68
LINC00556-201ENST00000569603 IGF1RP08069 1367 aa10.82□□□□□ -0.68
LINC00556-201ENST00000569603 PSEN2P49810 448 aa10.82□□□□□ -0.68
LINC00556-201ENST00000569603 DMRTA1Q5VZB9 504 aa10.82□□□□□ -0.68
LINC00556-201ENST00000569603 ADGRD1Q6QNK2 874 aa10.82□□□□□ -0.68
LINC00556-201ENST00000569603 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
LINC00556-201ENST00000569603 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC00556-201ENST00000569603 PRG4Q92954 1404 aaPredicted RBP10.8□□□□□ -0.68
LINC00556-201ENST00000569603 OXER1Q8TDS5 423 aa10.79□□□□□ -0.68
LINC00556-201ENST00000569603 KIF13AQ9H1H9 1805 aa10.79□□□□□ -0.68
LINC00556-201ENST00000569603 JPH4Q96JJ6 628 aa10.78□□□□□ -0.68
LINC00556-201ENST00000569603 CUL7Q14999 1698 aa10.78□□□□□ -0.68
LINC00556-201ENST00000569603 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
LINC00556-201ENST00000569603 TBC1D12O60347 775 aa10.77□□□□□ -0.69
LINC00556-201ENST00000569603 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.69
LINC00556-201ENST00000569603 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
LINC00556-201ENST00000569603 RYDENQ9NUL5 291 aaKnown RBP10.77□□□□□ -0.69
LINC00556-201ENST00000569603 KIAA0586Q9BVV6 1533 aa10.77□□□□□ -0.69
LINC00556-201ENST00000569603 KIF27Q86VH2 1401 aa10.76□□□□□ -0.69
LINC00556-201ENST00000569603 GTPBP6O43824 516 aaPredicted RBP10.75□□□□□ -0.69
LINC00556-201ENST00000569603 ADCY10Q96PN6 1610 aa10.74□□□□□ -0.69
LINC00556-201ENST00000569603 HRO43593 1189 aa10.74□□□□□ -0.69
LINC00556-201ENST00000569603 MAPKBP1O60336 1514 aa10.74□□□□□ -0.69
LINC00556-201ENST00000569603 TK2O00142 265 aa10.73□□□□□ -0.69
LINC00556-201ENST00000569603 KCNK17Q96T54 332 aa10.73□□□□□ -0.69
LINC00556-201ENST00000569603 ABCC10Q5T3U5 1492 aa10.7□□□□□ -0.7
LINC00556-201ENST00000569603 CARMIL1Q5VZK9 1371 aa10.69□□□□□ -0.7
LINC00556-201ENST00000569603 ZNF454Q8N9F8 522 aa10.69□□□□□ -0.7
LINC00556-201ENST00000569603 DIP2BQ9P265 1576 aa10.69□□□□□ -0.7
LINC00556-201ENST00000569603 PDE4AP27815 886 aa10.68□□□□□ -0.7
LINC00556-201ENST00000569603 HCSTQ9UBK5 93 aa10.67□□□□□ -0.7
LINC00556-201ENST00000569603 FOSBP53539 338 aa10.66□□□□□ -0.7
LINC00556-201ENST00000569603 DISP1Q96F81 1524 aa10.65□□□□□ -0.7
LINC00556-201ENST00000569603 LARP6Q9BRS8 491 aaKnown RBP10.65□□□□□ -0.7
LINC00556-201ENST00000569603 IQGAP2Q13576 1575 aa10.65□□□□□ -0.71
LINC00556-201ENST00000569603 KCTD12Q96CX2 325 aaKnown RBP10.64□□□□□ -0.71
LINC00556-201ENST00000569603 BCL2L12Q9HB09 334 aa10.64□□□□□ -0.71
LINC00556-201ENST00000569603 VPS9D1Q9Y2B5 631 aa10.64□□□□□ -0.71
LINC00556-201ENST00000569603 EVI5O60447 810 aa10.63□□□□□ -0.71
LINC00556-201ENST00000569603 MFSD10Q14728 455 aa10.63□□□□□ -0.71
LINC00556-201ENST00000569603 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
LINC00556-201ENST00000569603 KCNH8Q96L42 1107 aa10.63□□□□□ -0.71
LINC00556-201ENST00000569603 PLA2G2EQ9NZK7 142 aa10.63□□□□□ -0.71
LINC00556-201ENST00000569603 UGGT2Q9NYU1 1516 aa10.63□□□□□ -0.71
LINC00556-201ENST00000569603 UHRF1BP1LA0JNW5 1464 aa10.62□□□□□ -0.71
LINC00556-201ENST00000569603 CADPS2Q86UW7 1296 aa10.62□□□□□ -0.71
LINC00556-201ENST00000569603 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
LINC00556-201ENST00000569603 ABCC2Q92887 1545 aa10.62□□□□□ -0.71
LINC00556-201ENST00000569603 TNIKQ9UKE5 1360 aa10.62□□□□□ -0.71
LINC00556-201ENST00000569603 PTPRGP23470 1445 aa10.61□□□□□ -0.71
LINC00556-201ENST00000569603 EMILIN3Q9NT22 766 aa10.6□□□□□ -0.71
LINC00556-201ENST00000569603 RAPGEF2Q9Y4G8 1499 aa10.6□□□□□ -0.71
LINC00556-201ENST00000569603 FAM69CQ0P6D2 419 aa10.59□□□□□ -0.71
LINC00556-201ENST00000569603 ADAM33Q9BZ11 813 aa10.59□□□□□ -0.71
LINC00556-201ENST00000569603 PPRC1Q5VV67 1664 aaKnown RBP10.59□□□□□ -0.71
LINC00556-201ENST00000569603 CARMIL2Q6F5E8 1435 aa10.58□□□□□ -0.72
LINC00556-201ENST00000569603 GLI2P10070 1586 aa10.58□□□□□ -0.72
LINC00556-201ENST00000569603 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
LINC00556-201ENST00000569603 KDM5BQ9UGL1 1544 aa10.58□□□□□ -0.72
LINC00556-201ENST00000569603 PTPREP23469 700 aa10.57□□□□□ -0.72
LINC00556-201ENST00000569603 STAC3Q96MF2 364 aa10.57□□□□□ -0.72
LINC00556-201ENST00000569603 ZBED2Q9BTP6 218 aa10.57□□□□□ -0.72
LINC00556-201ENST00000569603 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
LINC00556-201ENST00000569603 KIAA0556O60303 1618 aa10.57□□□□□ -0.72
LINC00556-201ENST00000569603 UACAQ9BZF9 1416 aa10.57□□□□□ -0.72
LINC00556-201ENST00000569603 PRXQ9BXM0 1461 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms