RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 SPATA31D1Q6ZQQ2 1576 aa18.17■□□□□ 0.5
CHRFAM7A-206ENST00000569278 ILDR2Q71H61 639 aa18.17■□□□□ 0.5
CHRFAM7A-206ENST00000569278 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
CHRFAM7A-206ENST00000569278 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
CHRFAM7A-206ENST00000569278 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
CHRFAM7A-206ENST00000569278 MTUS2Q5JR59 1369 aa18.16■□□□□ 0.5
CHRFAM7A-206ENST00000569278 DNMT1P26358 1616 aaKnown RBP18.14■□□□□ 0.49
CHRFAM7A-206ENST00000569278 NCKAP5LQ9HCH0 1330 aa18.14■□□□□ 0.49
CHRFAM7A-206ENST00000569278 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
CHRFAM7A-206ENST00000569278 ZNF335Q9H4Z2 1342 aaPredicted RBP18.13■□□□□ 0.49
CHRFAM7A-206ENST00000569278 RTEL1-TNFRSF6BF6WH68 1400 aa18.12■□□□□ 0.49
CHRFAM7A-206ENST00000569278 DISP3Q9P2K9 1392 aa18.11■□□□□ 0.49
CHRFAM7A-206ENST00000569278 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
CHRFAM7A-206ENST00000569278 A2ML1A8K2U0 1454 aa18.1■□□□□ 0.49
CHRFAM7A-206ENST00000569278 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
CHRFAM7A-206ENST00000569278 POLR1AO95602 1720 aaPredicted RBP18.09■□□□□ 0.49
CHRFAM7A-206ENST00000569278 CCDC141Q6ZP82 1450 aa18.08■□□□□ 0.49
CHRFAM7A-206ENST00000569278 GGT6Q6P531 493 aa18.08■□□□□ 0.48
CHRFAM7A-206ENST00000569278 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.48
CHRFAM7A-206ENST00000569278 DHX29Q7Z478 1369 aaKnown RBP18.07■□□□□ 0.48
CHRFAM7A-206ENST00000569278 FAM135AQ9P2D6 1515 aa18.07■□□□□ 0.48
CHRFAM7A-206ENST00000569278 PZPP20742 1482 aa18.07■□□□□ 0.48
CHRFAM7A-206ENST00000569278 ARHGEF5Q12774 1597 aa18.05■□□□□ 0.48
CHRFAM7A-206ENST00000569278 RNF17Q9BXT8 1623 aaKnown RBP18.03■□□□□ 0.48
CHRFAM7A-206ENST00000569278 PKD2Q13563 968 aa18.03■□□□□ 0.48
CHRFAM7A-206ENST00000569278 MROH1Q8NDA8 1641 aa18.01■□□□□ 0.47
CHRFAM7A-206ENST00000569278 ALKQ9UM73 1620 aa18.01■□□□□ 0.47
CHRFAM7A-206ENST00000569278 VWDEQ8N2E2 1590 aa18.01■□□□□ 0.47
CHRFAM7A-206ENST00000569278 FBXO31Q5XUX0 539 aaPredicted RBP18.01■□□□□ 0.47
CHRFAM7A-206ENST00000569278 TNRQ92752 1358 aa18.01■□□□□ 0.47
CHRFAM7A-206ENST00000569278 MAST1Q9Y2H9 1570 aa18■□□□□ 0.47
CHRFAM7A-206ENST00000569278 SOCS7O14512 581 aa17.98■□□□□ 0.47
CHRFAM7A-206ENST00000569278 ABCC3O15438 1527 aa17.98■□□□□ 0.47
CHRFAM7A-206ENST00000569278 LRRC9Q6ZRR7 1453 aa17.96■□□□□ 0.47
CHRFAM7A-206ENST00000569278 KIF3BO15066 747 aa17.96■□□□□ 0.47
CHRFAM7A-206ENST00000569278 DEPDC5O75140 1603 aa17.96■□□□□ 0.47
CHRFAM7A-206ENST00000569278 STRCP1A6NGW2 1772 aa17.96■□□□□ 0.47
CHRFAM7A-206ENST00000569278 ZC3H13Q5T200 1668 aaKnown RBP17.95■□□□□ 0.46
CHRFAM7A-206ENST00000569278 CPS1P31327 1500 aa17.94■□□□□ 0.46
CHRFAM7A-206ENST00000569278 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
CHRFAM7A-206ENST00000569278 MED14O60244 1454 aa17.94■□□□□ 0.46
CHRFAM7A-206ENST00000569278 NLRP1Q9C000 1473 aa17.94■□□□□ 0.46
CHRFAM7A-206ENST00000569278 SHANK2Q9UPX8 1470 aa17.94■□□□□ 0.46
CHRFAM7A-206ENST00000569278 EIF2AK4Q9P2K8 1649 aaKnown RBP17.94■□□□□ 0.46
CHRFAM7A-206ENST00000569278 UGGT1Q9NYU2 1555 aa17.93■□□□□ 0.46
CHRFAM7A-206ENST00000569278 VPS8Q8N3P4 1428 aa17.93■□□□□ 0.46
CHRFAM7A-206ENST00000569278 MIA2Q96PC5 1412 aa17.93■□□□□ 0.46
CHRFAM7A-206ENST00000569278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.92■□□□□ 0.46
CHRFAM7A-206ENST00000569278 IQGAP1P46940 1657 aa17.92■□□□□ 0.46
CHRFAM7A-206ENST00000569278 CEP152O94986 1710 aa17.92■□□□□ 0.46
CHRFAM7A-206ENST00000569278 ERVK-7P63135 1459 aa17.9■□□□□ 0.46
CHRFAM7A-206ENST00000569278 MED1Q15648 1581 aaPredicted RBP17.9■□□□□ 0.46
CHRFAM7A-206ENST00000569278 CROCC2H7BZ55 1655 aa17.88■□□□□ 0.45
CHRFAM7A-206ENST00000569278 UBR1Q8IWV7 1749 aa17.88■□□□□ 0.45
CHRFAM7A-206ENST00000569278 WASHC2CQ9Y4E1 1318 aa17.88■□□□□ 0.45
CHRFAM7A-206ENST00000569278 NPHP4O75161 1426 aaPredicted RBP17.88■□□□□ 0.45
CHRFAM7A-206ENST00000569278 MAP3K1Q13233 1512 aa17.87■□□□□ 0.45
CHRFAM7A-206ENST00000569278 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
CHRFAM7A-206ENST00000569278 RSPH4AQ5TD94 716 aa17.86■□□□□ 0.45
CHRFAM7A-206ENST00000569278 PRDM15P57071 1507 aaPredicted RBP17.86■□□□□ 0.45
CHRFAM7A-206ENST00000569278 MYOM3Q5VTT5 1437 aa17.85■□□□□ 0.45
CHRFAM7A-206ENST00000569278 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
CHRFAM7A-206ENST00000569278 HSPA1LP34931 641 aa17.84■□□□□ 0.45
CHRFAM7A-206ENST00000569278 SYNMO15061 1565 aa17.83■□□□□ 0.45
CHRFAM7A-206ENST00000569278 LRRC7Q96NW7 1537 aa17.82■□□□□ 0.44
CHRFAM7A-206ENST00000569278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHRFAM7A-206ENST00000569278 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
CHRFAM7A-206ENST00000569278 ARHGAP23Q9P227 1491 aa17.81■□□□□ 0.44
CHRFAM7A-206ENST00000569278 XIRP1Q702N8 1843 aaKnown RBP17.8■□□□□ 0.44
CHRFAM7A-206ENST00000569278 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
CHRFAM7A-206ENST00000569278 SLIT1O75093 1534 aa17.79■□□□□ 0.44
CHRFAM7A-206ENST00000569278 CFAP65Q6ZU64 1925 aaKnown RBP17.78■□□□□ 0.44
CHRFAM7A-206ENST00000569278 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
CHRFAM7A-206ENST00000569278 TSPY4P0CV99 314 aa17.78■□□□□ 0.44
CHRFAM7A-206ENST00000569278 TSPY10P0CW01 314 aa17.78■□□□□ 0.44
CHRFAM7A-206ENST00000569278 THEMISQ8N1K5 641 aaPredicted RBP17.78■□□□□ 0.44
CHRFAM7A-206ENST00000569278 ABCC5O15440 1437 aa17.78■□□□□ 0.44
CHRFAM7A-206ENST00000569278 PTPN23Q9H3S7 1636 aa17.77■□□□□ 0.44
CHRFAM7A-206ENST00000569278 PIP4K2BP78356 416 aa17.77■□□□□ 0.44
CHRFAM7A-206ENST00000569278 PIK3C2BO00750 1634 aa17.76■□□□□ 0.43
CHRFAM7A-206ENST00000569278 SCAF11Q99590 1463 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-206ENST00000569278 ARHGAP31Q2M1Z3 1444 aa17.76■□□□□ 0.43
CHRFAM7A-206ENST00000569278 ERBINQ96RT1 1412 aa17.75■□□□□ 0.43
CHRFAM7A-206ENST00000569278 KIF15Q9NS87 1388 aa17.75■□□□□ 0.43
CHRFAM7A-206ENST00000569278 TOM1O60784 492 aa17.73■□□□□ 0.43
CHRFAM7A-206ENST00000569278 LTKP29376 864 aa17.72■□□□□ 0.43
CHRFAM7A-206ENST00000569278 DAPK1P53355 1430 aa17.72■□□□□ 0.43
CHRFAM7A-206ENST00000569278 LMTK2Q8IWU2 1503 aa17.71■□□□□ 0.43
CHRFAM7A-206ENST00000569278 KDM5AP29375 1690 aaKnown RBP17.7■□□□□ 0.42
CHRFAM7A-206ENST00000569278 FGD6Q6ZV73 1430 aa17.68■□□□□ 0.42
CHRFAM7A-206ENST00000569278 ZBTB22O15209 634 aa17.67■□□□□ 0.42
CHRFAM7A-206ENST00000569278 EFCAB6Q5THR3 1501 aa17.67■□□□□ 0.42
CHRFAM7A-206ENST00000569278 TET3O43151 1660 aa17.66■□□□□ 0.42
CHRFAM7A-206ENST00000569278 TMEM2Q9UHN6 1383 aa17.65■□□□□ 0.42
CHRFAM7A-206ENST00000569278 RRP7BPQ9NSQ0 103 aa17.64■□□□□ 0.41
CHRFAM7A-206ENST00000569278 NOS1P29475 1434 aa17.64■□□□□ 0.41
CHRFAM7A-206ENST00000569278 ADGRB3O60242 1522 aa17.63■□□□□ 0.41
CHRFAM7A-206ENST00000569278 NWD1Q149M9 1564 aa17.63■□□□□ 0.41
CHRFAM7A-206ENST00000569278 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
CHRFAM7A-206ENST00000569278 ADGRL2O95490 1459 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms