RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 SGIP1Q9BQI5 828 aa14.4□□□□□ -0.1
CAPN3-219ENST00000569136 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
CAPN3-219ENST00000569136 SCAPERQ9BY12 1400 aa14.4□□□□□ -0.1
CAPN3-219ENST00000569136 KDM4FA0A1W2PPD8 638 aa14.39□□□□□ -0.11
CAPN3-219ENST00000569136 MS4A3Q96HJ5 214 aa14.39□□□□□ -0.11
CAPN3-219ENST00000569136 CCNB3Q8WWL7 1395 aa14.38□□□□□ -0.11
CAPN3-219ENST00000569136 PCF11O94913 1555 aaKnown RBP14.38□□□□□ -0.11
CAPN3-219ENST00000569136 AFAP1Q8N556 730 aa14.37□□□□□ -0.11
CAPN3-219ENST00000569136 ZNF777Q9ULD5 760 aaPredicted RBP14.37□□□□□ -0.11
CAPN3-219ENST00000569136 PDAP1Q13442 181 aaKnown RBP14.35□□□□□ -0.11
CAPN3-219ENST00000569136 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
CAPN3-219ENST00000569136 KIF14Q15058 1648 aa14.34□□□□□ -0.11
CAPN3-219ENST00000569136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-219ENST00000569136 STK25O00506 426 aa14.34□□□□□ -0.11
CAPN3-219ENST00000569136 RSPH4AQ5TD94 716 aa14.34□□□□□ -0.11
CAPN3-219ENST00000569136 ZFP91Q96JP5 570 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-219ENST00000569136 MYT1LQ9UL68 1186 aa14.34□□□□□ -0.11
CAPN3-219ENST00000569136 ARID4BQ4LE39 1312 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-219ENST00000569136 MAGI2Q86UL8 1455 aa14.33□□□□□ -0.12
CAPN3-219ENST00000569136 PSEN1P49768 467 aa14.33□□□□□ -0.12
CAPN3-219ENST00000569136 GPATCH8Q9UKJ3 1502 aaKnown RBP14.32□□□□□ -0.12
CAPN3-219ENST00000569136 TTC37Q6PGP7 1564 aa14.32□□□□□ -0.12
CAPN3-219ENST00000569136 GALR2O43603 387 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-219ENST00000569136 ARHGAP5Q13017 1502 aa14.31□□□□□ -0.12
CAPN3-219ENST00000569136 HNRNPMP52272 730 aaKnown RBP eCLIP14.31□□□□□ -0.12
CAPN3-219ENST00000569136 CLCN6P51797 869 aa14.3□□□□□ -0.12
CAPN3-219ENST00000569136 KANK4Q5T7N3 995 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-219ENST00000569136 STK24Q9Y6E0 443 aa14.3□□□□□ -0.12
CAPN3-219ENST00000569136 POGZQ7Z3K3 1410 aa14.3□□□□□ -0.12
CAPN3-219ENST00000569136 KIAA1107Q9UPP5 1409 aa14.3□□□□□ -0.12
CAPN3-219ENST00000569136 MAP3K1Q13233 1512 aa14.3□□□□□ -0.12
CAPN3-219ENST00000569136 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
CAPN3-219ENST00000569136 ZNF518AQ6AHZ1 1483 aa14.28□□□□□ -0.12
CAPN3-219ENST00000569136 PLEKHH2Q8IVE3 1493 aa14.28□□□□□ -0.12
CAPN3-219ENST00000569136 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
CAPN3-219ENST00000569136 GABBR2O75899 941 aa14.27□□□□□ -0.13
CAPN3-219ENST00000569136 SPAG9O60271 1321 aaKnown RBP14.26□□□□□ -0.13
CAPN3-219ENST00000569136 TRPC6Q9Y210 931 aa14.26□□□□□ -0.13
CAPN3-219ENST00000569136 LRRC9Q6ZRR7 1453 aa14.25□□□□□ -0.13
CAPN3-219ENST00000569136 ZNF644Q9H582 1327 aaPredicted RBP14.25□□□□□ -0.13
CAPN3-219ENST00000569136 HS6ST3Q8IZP7 471 aa14.25□□□□□ -0.13
CAPN3-219ENST00000569136 EHBP1L1Q8N3D4 1523 aa14.25□□□□□ -0.13
CAPN3-219ENST00000569136 ATP10AO60312 1499 aa14.25□□□□□ -0.13
CAPN3-219ENST00000569136 TSPY4P0CV99 314 aa14.24□□□□□ -0.13
CAPN3-219ENST00000569136 TSPY10P0CW01 314 aa14.24□□□□□ -0.13
CAPN3-219ENST00000569136 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
CAPN3-219ENST00000569136 NCOA2Q15596 1464 aa14.24□□□□□ -0.13
CAPN3-219ENST00000569136 TRAPPC8Q9Y2L5 1435 aa14.24□□□□□ -0.13
CAPN3-219ENST00000569136 TMEM106CQ9BVX2 250 aa14.23□□□□□ -0.13
CAPN3-219ENST00000569136 MLH3Q9UHC1 1453 aa14.23□□□□□ -0.13
CAPN3-219ENST00000569136 LRRIQ1Q96JM4 1722 aa14.22□□□□□ -0.13
CAPN3-219ENST00000569136 YEATS2Q9ULM3 1422 aa14.22□□□□□ -0.13
CAPN3-219ENST00000569136 TIAM1Q13009 1591 aa14.21□□□□□ -0.14
CAPN3-219ENST00000569136 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.14
CAPN3-219ENST00000569136 ZMYM4Q5VZL5 1548 aa14.2□□□□□ -0.14
CAPN3-219ENST00000569136 ARHGEF12Q9NZN5 1544 aa14.2□□□□□ -0.14
CAPN3-219ENST00000569136 ZFYVE16Q7Z3T8 1539 aa14.2□□□□□ -0.14
CAPN3-219ENST00000569136 MLECQ14165 292 aa14.19□□□□□ -0.14
CAPN3-219ENST00000569136 BBXQ8WY36 941 aaPredicted RBP14.19□□□□□ -0.14
CAPN3-219ENST00000569136 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.19□□□□□ -0.14
CAPN3-219ENST00000569136 FRMPD1Q5SYB0 1578 aa14.18□□□□□ -0.14
CAPN3-219ENST00000569136 C9orf84Q5VXU9 1444 aa14.18□□□□□ -0.14
CAPN3-219ENST00000569136 MIA2Q96PC5 1412 aa14.18□□□□□ -0.14
CAPN3-219ENST00000569136 GOLGA2Q08379 1002 aa14.18□□□□□ -0.14
CAPN3-219ENST00000569136 CABP2Q9NPB3 220 aa14.18□□□□□ -0.14
CAPN3-219ENST00000569136 TIE1P35590 1138 aa14.17□□□□□ -0.14
CAPN3-219ENST00000569136 ESF1Q9H501 851 aaKnown RBP14.17□□□□□ -0.14
CAPN3-219ENST00000569136 ABCC1P33527 1531 aa14.16□□□□□ -0.14
CAPN3-219ENST00000569136 PREX2Q70Z35 1606 aa14.16□□□□□ -0.14
CAPN3-219ENST00000569136 DCBLD2Q96PD2 775 aa14.16□□□□□ -0.14
CAPN3-219ENST00000569136 MBD5Q9P267 1494 aa14.16□□□□□ -0.14
CAPN3-219ENST00000569136 RTEL1-TNFRSF6BF6WH68 1400 aa14.15□□□□□ -0.14
CAPN3-219ENST00000569136 BMP2KQ9NSY1 1161 aaPredicted RBP14.15□□□□□ -0.14
CAPN3-219ENST00000569136 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
CAPN3-219ENST00000569136 CDC42BPBQ9Y5S2 1711 aa14.15□□□□□ -0.14
CAPN3-219ENST00000569136 MYOM3Q5VTT5 1437 aa14.15□□□□□ -0.14
CAPN3-219ENST00000569136 KDM5CP41229 1560 aa14.14□□□□□ -0.15
CAPN3-219ENST00000569136 TTLL13PA6NNM8 815 aa14.14□□□□□ -0.15
CAPN3-219ENST00000569136 ARHGEF40Q8TER5 1519 aa14.14□□□□□ -0.15
CAPN3-219ENST00000569136 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
CAPN3-219ENST00000569136 CDC42BPAQ5VT25 1732 aa14.11□□□□□ -0.15
CAPN3-219ENST00000569136 SAMD9LQ8IVG5 1584 aa14.11□□□□□ -0.15
CAPN3-219ENST00000569136 SYCP2Q9BX26 1530 aa14.1□□□□□ -0.15
CAPN3-219ENST00000569136 DHX29Q7Z478 1369 aaKnown RBP14.1□□□□□ -0.15
CAPN3-219ENST00000569136 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
CAPN3-219ENST00000569136 PTPRMP28827 1452 aa14.08□□□□□ -0.16
CAPN3-219ENST00000569136 CCDC141Q6ZP82 1450 aa14.08□□□□□ -0.16
CAPN3-219ENST00000569136 MKRN3Q13064 507 aaKnown RBP14.08□□□□□ -0.16
CAPN3-219ENST00000569136 GGT6Q6P531 493 aa14.08□□□□□ -0.16
CAPN3-219ENST00000569136 PAXIP1Q6ZW49 1069 aaPredicted RBP14.08□□□□□ -0.16
CAPN3-219ENST00000569136 EFCAB3Q8N7B9 438 aa14.08□□□□□ -0.16
CAPN3-219ENST00000569136 TRIM35Q9UPQ4 493 aa14.08□□□□□ -0.16
CAPN3-219ENST00000569136 AGLP35573 1532 aa14.08□□□□□ -0.16
CAPN3-219ENST00000569136 CAMSAP2Q08AD1 1489 aa14.07□□□□□ -0.16
CAPN3-219ENST00000569136 KIF3BO15066 747 aa14.07□□□□□ -0.16
CAPN3-219ENST00000569136 HECW2Q9P2P5 1572 aa14.07□□□□□ -0.16
CAPN3-219ENST00000569136 A2MP01023 1474 aa14.06□□□□□ -0.16
CAPN3-219ENST00000569136 ATMINO43313 823 aaPredicted RBP14.06□□□□□ -0.16
CAPN3-219ENST00000569136 ATN1P54259 1190 aaPredicted RBP14.06□□□□□ -0.16
CAPN3-219ENST00000569136 FAM50AQ14320 339 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms