RNA–Protein interactions for RNA: ENST00000569110.1

TSC2-225, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-225ENST00000569110 DEPDC5O75140 1603 aa24.19■■□□□ 1.46
TSC2-225ENST00000569110 IQGAP3Q86VI3 1631 aa24.19■■□□□ 1.46
TSC2-225ENST00000569110 FOXD1Q16676 465 aa24.19■■□□□ 1.46
TSC2-225ENST00000569110 FAM135AQ9P2D6 1515 aa24.19■■□□□ 1.46
TSC2-225ENST00000569110 A2MP01023 1474 aa24.19■■□□□ 1.46
TSC2-225ENST00000569110 COL17A1Q9UMD9 1497 aaPredicted RBP24.17■■□□□ 1.46
TSC2-225ENST00000569110 DIP2CQ9Y2E4 1556 aa24.17■■□□□ 1.46
TSC2-225ENST00000569110 ANKRD30BQ9BXX2 1392 aa24.17■■□□□ 1.46
TSC2-225ENST00000569110 NEUROD1Q13562 356 aa24.15■■□□□ 1.46
TSC2-225ENST00000569110 PKD2Q13563 968 aa24.15■■□□□ 1.46
TSC2-225ENST00000569110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.15■■□□□ 1.46
TSC2-225ENST00000569110 BCORL1Q5H9F3 1711 aa24.13■■□□□ 1.45
TSC2-225ENST00000569110 YEATS2Q9ULM3 1422 aa24.13■■□□□ 1.45
TSC2-225ENST00000569110 KIF3BO15066 747 aa24.12■■□□□ 1.45
TSC2-225ENST00000569110 MROH1Q8NDA8 1641 aa24.12■■□□□ 1.45
TSC2-225ENST00000569110 VWDEQ8N2E2 1590 aa24.1■■□□□ 1.45
TSC2-225ENST00000569110 RNF17Q9BXT8 1623 aaKnown RBP24.1■■□□□ 1.45
TSC2-225ENST00000569110 PRDM15P57071 1507 aaPredicted RBP24.09■■□□□ 1.45
TSC2-225ENST00000569110 TIMELESSQ9UNS1 1208 aa24.08■■□□□ 1.45
TSC2-225ENST00000569110 ATP10AO60312 1499 aa24.04■■□□□ 1.44
TSC2-225ENST00000569110 RPRD2Q5VT52 1461 aaKnown RBP24.03■■□□□ 1.44
TSC2-225ENST00000569110 TET3O43151 1660 aa24.02■■□□□ 1.44
TSC2-225ENST00000569110 KANK1Q14678 1352 aa24.02■■□□□ 1.44
TSC2-225ENST00000569110 REREQ9P2R6 1566 aa24.01■■□□□ 1.43
TSC2-225ENST00000569110 E9PCH4 1651 aa24.01■■□□□ 1.43
TSC2-225ENST00000569110 TONSLQ96HA7 1378 aa23.99■■□□□ 1.43
TSC2-225ENST00000569110 ARHGEF40Q8TER5 1519 aa23.99■■□□□ 1.43
TSC2-225ENST00000569110 CEP152O94986 1710 aa23.98■■□□□ 1.43
TSC2-225ENST00000569110 PLA2R1Q13018 1463 aa23.97■■□□□ 1.43
TSC2-225ENST00000569110 LMTK2Q8IWU2 1503 aa23.97■■□□□ 1.43
TSC2-225ENST00000569110 SIGLEC1Q9BZZ2 1709 aa23.96■■□□□ 1.43
TSC2-225ENST00000569110 PPP1R15AO75807 674 aaPredicted RBP23.95■■□□□ 1.43
TSC2-225ENST00000569110 GGT6Q6P531 493 aa23.95■■□□□ 1.42
TSC2-225ENST00000569110 AGLP35573 1532 aa23.94■■□□□ 1.42
TSC2-225ENST00000569110 EFCAB6Q5THR3 1501 aa23.92■■□□□ 1.42
TSC2-225ENST00000569110 SPHKAPQ2M3C7 1700 aa23.91■■□□□ 1.42
TSC2-225ENST00000569110 ABCC3O15438 1527 aa23.9■■□□□ 1.42
TSC2-225ENST00000569110 ARID4BQ4LE39 1312 aaPredicted RBP23.89■■□□□ 1.42
TSC2-225ENST00000569110 L3MBTL2Q969R5 705 aa23.89■■□□□ 1.41
TSC2-225ENST00000569110 PTPRTO14522 1441 aa23.89■■□□□ 1.41
TSC2-225ENST00000569110 ZC3H13Q5T200 1668 aaKnown RBP23.87■■□□□ 1.41
TSC2-225ENST00000569110 CCDC144AA2RUR9 1427 aa23.86■■□□□ 1.41
TSC2-225ENST00000569110 WASHC2CQ9Y4E1 1318 aa23.86■■□□□ 1.41
TSC2-225ENST00000569110 CAMSAP1Q5T5Y3 1602 aa23.85■■□□□ 1.41
TSC2-225ENST00000569110 TRPM2O94759 1503 aa23.85■■□□□ 1.41
TSC2-225ENST00000569110 CFAP65Q6ZU64 1925 aaKnown RBP23.85■■□□□ 1.41
TSC2-225ENST00000569110 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
TSC2-225ENST00000569110 NPATQ14207 1427 aa23.81■■□□□ 1.4
TSC2-225ENST00000569110 CLTCL1P53675 1640 aa23.79■■□□□ 1.4
TSC2-225ENST00000569110 PPP6R1Q9UPN7 881 aa23.79■■□□□ 1.4
TSC2-225ENST00000569110 ARHGAP31Q2M1Z3 1444 aa23.78■■□□□ 1.4
TSC2-225ENST00000569110 CLTCQ00610 1675 aaKnown RBP23.74■■□□□ 1.39
TSC2-225ENST00000569110 SPATA31E1Q6ZUB1 1445 aa23.73■■□□□ 1.39
TSC2-225ENST00000569110 ZNF316A6NFI3 1004 aaPredicted RBP23.73■■□□□ 1.39
TSC2-225ENST00000569110 NBPF8Q3BBV2 869 aa23.72■■□□□ 1.39
TSC2-225ENST00000569110 UGGT1Q9NYU2 1555 aa23.72■■□□□ 1.39
TSC2-225ENST00000569110 NOS1P29475 1434 aa23.71■■□□□ 1.39
TSC2-225ENST00000569110 KIF1BO60333 1816 aa23.71■■□□□ 1.39
TSC2-225ENST00000569110 MLECQ14165 292 aa23.7■■□□□ 1.39
TSC2-225ENST00000569110 CNTLNQ9NXG0 1405 aa23.7■■□□□ 1.38
TSC2-225ENST00000569110 KDM4FA0A1W2PPD8 638 aa23.69■■□□□ 1.38
TSC2-225ENST00000569110 PREX1Q8TCU6 1659 aa23.69■■□□□ 1.38
TSC2-225ENST00000569110 RGL3Q3MIN7 710 aa23.68■■□□□ 1.38
TSC2-225ENST00000569110 UHRF1BP1Q6BDS2 1440 aa23.68■■□□□ 1.38
TSC2-225ENST00000569110 NEURL4Q96JN8 1562 aa23.68■■□□□ 1.38
TSC2-225ENST00000569110 SYNMO15061 1565 aa23.67■■□□□ 1.38
TSC2-225ENST00000569110 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
TSC2-225ENST00000569110 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
TSC2-225ENST00000569110 ESF1Q9H501 851 aaKnown RBP23.64■■□□□ 1.37
TSC2-225ENST00000569110 KDM2AQ9Y2K7 1162 aa23.64■■□□□ 1.37
TSC2-225ENST00000569110 MROH2AA6NES4 1674 aa23.63■■□□□ 1.37
TSC2-225ENST00000569110 ERVK-7P63135 1459 aa23.6■■□□□ 1.37
TSC2-225ENST00000569110 ADGRB3O60242 1522 aa23.59■■□□□ 1.37
TSC2-225ENST00000569110 FBXO31Q5XUX0 539 aaPredicted RBP23.59■■□□□ 1.37
TSC2-225ENST00000569110 ZNF326Q5BKZ1 582 aaKnown RBP23.58■■□□□ 1.37
TSC2-225ENST00000569110 PRAG1Q86YV5 1406 aa23.58■■□□□ 1.37
TSC2-225ENST00000569110 ZMYM3Q14202 1370 aa23.57■■□□□ 1.36
TSC2-225ENST00000569110 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
TSC2-225ENST00000569110 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
TSC2-225ENST00000569110 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
TSC2-225ENST00000569110 TRPM1Q7Z4N2 1603 aa23.55■■□□□ 1.36
TSC2-225ENST00000569110 RALGAPBQ86X10 1494 aa23.55■■□□□ 1.36
TSC2-225ENST00000569110 IDI1Q13907 227 aa23.54■■□□□ 1.36
TSC2-225ENST00000569110 FER1L4A9Z1Z3 1794 aa23.53■■□□□ 1.36
TSC2-225ENST00000569110 STAC3Q96MF2 364 aa23.53■■□□□ 1.36
TSC2-225ENST00000569110 MYO5BQ9ULV0 1848 aa23.53■■□□□ 1.36
TSC2-225ENST00000569110 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
TSC2-225ENST00000569110 MADDQ8WXG6 1647 aa23.52■■□□□ 1.36
TSC2-225ENST00000569110 ADAMTSL3P82987 1691 aa23.52■■□□□ 1.36
TSC2-225ENST00000569110 PPLO60437 1756 aa23.51■■□□□ 1.35
TSC2-225ENST00000569110 TMEM131LA2VDJ0 1609 aa23.5■■□□□ 1.35
TSC2-225ENST00000569110 CHGAP10645 457 aaKnown RBP23.5■■□□□ 1.35
TSC2-225ENST00000569110 HIRIP3Q9BW71 556 aaPredicted RBP23.49■■□□□ 1.35
TSC2-225ENST00000569110 MYOM2P54296 1465 aa23.48■■□□□ 1.35
TSC2-225ENST00000569110 HSPA5P11021 654 aaKnown RBP23.48■■□□□ 1.35
TSC2-225ENST00000569110 EIF4G2P78344 907 aaKnown RBP eCLIP23.48■■□□□ 1.35
TSC2-225ENST00000569110 C3P01024 1663 aa23.47■■□□□ 1.35
TSC2-225ENST00000569110 RIMS1Q86UR5 1692 aaKnown RBP23.46■■□□□ 1.35
TSC2-225ENST00000569110 PTPRMP28827 1452 aa23.46■■□□□ 1.35
TSC2-225ENST00000569110 RPGRIP1LQ68CZ1 1315 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms