RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 ABCA6Q8N139 1617 aa18.35■□□□□ 0.53
GGA2-213ENST00000568922 A2MP01023 1474 aa18.34■□□□□ 0.53
GGA2-213ENST00000568922 SIN3AQ96ST3 1273 aa18.34■□□□□ 0.53
GGA2-213ENST00000568922 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
GGA2-213ENST00000568922 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
GGA2-213ENST00000568922 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
GGA2-213ENST00000568922 DIP2CQ9Y2E4 1556 aa18.31■□□□□ 0.52
GGA2-213ENST00000568922 BCORL1Q5H9F3 1711 aa18.31■□□□□ 0.52
GGA2-213ENST00000568922 PKD2Q13563 968 aa18.3■□□□□ 0.52
GGA2-213ENST00000568922 FOXD1Q16676 465 aa18.28■□□□□ 0.52
GGA2-213ENST00000568922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.525e-7■□□□□ 10.1
GGA2-213ENST00000568922 RNF17Q9BXT8 1623 aaKnown RBP18.28■□□□□ 0.52
GGA2-213ENST00000568922 PRDM15P57071 1507 aaPredicted RBP18.28■□□□□ 0.52
GGA2-213ENST00000568922 KIF3BO15066 747 aa18.27■□□□□ 0.52
GGA2-213ENST00000568922 VWDEQ8N2E2 1590 aa18.26■□□□□ 0.51
GGA2-213ENST00000568922 MROH1Q8NDA8 1641 aa18.26■□□□□ 0.51
GGA2-213ENST00000568922 KANK1Q14678 1352 aa18.26■□□□□ 0.51
GGA2-213ENST00000568922 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
GGA2-213ENST00000568922 YEATS2Q9ULM3 1422 aa18.25■□□□□ 0.51
GGA2-213ENST00000568922 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
GGA2-213ENST00000568922 TET3O43151 1660 aa18.24■□□□□ 0.51
GGA2-213ENST00000568922 COL17A1Q9UMD9 1497 aaPredicted RBP18.23■□□□□ 0.51
GGA2-213ENST00000568922 REREQ9P2R6 1566 aa18.22■□□□□ 0.51
GGA2-213ENST00000568922 ATP10AO60312 1499 aa18.21■□□□□ 0.51
GGA2-213ENST00000568922 TRHP20396 242 aaPredicted RBP18.21■□□□□ 0.51
GGA2-213ENST00000568922 E9PCH4 1651 aa18.2■□□□□ 0.5
GGA2-213ENST00000568922 ARHGEF40Q8TER5 1519 aa18.19■□□□□ 0.5
GGA2-213ENST00000568922 LMTK2Q8IWU2 1503 aa18.18■□□□□ 0.5
GGA2-213ENST00000568922 CEP152O94986 1710 aa18.17■□□□□ 0.5
GGA2-213ENST00000568922 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
GGA2-213ENST00000568922 AGLP35573 1532 aa18.15■□□□□ 0.5
GGA2-213ENST00000568922 EFCAB6Q5THR3 1501 aa18.15■□□□□ 0.5
GGA2-213ENST00000568922 ZC3H13Q5T200 1668 aaKnown RBP18.14■□□□□ 0.5
GGA2-213ENST00000568922 SPHKAPQ2M3C7 1700 aa18.14■□□□□ 0.49
GGA2-213ENST00000568922 GGT6Q6P531 493 aa18.13■□□□□ 0.49
GGA2-213ENST00000568922 PLA2R1Q13018 1463 aa18.13■□□□□ 0.49
GGA2-213ENST00000568922 CCDC144AA2RUR9 1427 aa18.13■□□□□ 0.49
GGA2-213ENST00000568922 ABCC3O15438 1527 aa18.11■□□□□ 0.49
GGA2-213ENST00000568922 TRPM2O94759 1503 aa18.11■□□□□ 0.49
GGA2-213ENST00000568922 PTPRTO14522 1441 aa18.1■□□□□ 0.49
GGA2-213ENST00000568922 L3MBTL2Q969R5 705 aa18.1■□□□□ 0.49
GGA2-213ENST00000568922 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
GGA2-213ENST00000568922 WASHC2CQ9Y4E1 1318 aa18.08■□□□□ 0.49
GGA2-213ENST00000568922 SIGLEC1Q9BZZ2 1709 aa18.08■□□□□ 0.48
GGA2-213ENST00000568922 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
GGA2-213ENST00000568922 ZNF316A6NFI3 1004 aaPredicted RBP18.05■□□□□ 0.48
GGA2-213ENST00000568922 CLTCL1P53675 1640 aa18.03■□□□□ 0.48
GGA2-213ENST00000568922 NPATQ14207 1427 aa18.03■□□□□ 0.48
GGA2-213ENST00000568922 ARHGAP31Q2M1Z3 1444 aa18.03■□□□□ 0.48
GGA2-213ENST00000568922 NEURL4Q96JN8 1562 aa18■□□□□ 0.47
GGA2-213ENST00000568922 CNTLNQ9NXG0 1405 aa18■□□□□ 0.47
GGA2-213ENST00000568922 KIF1BO60333 1816 aa17.99■□□□□ 0.47
GGA2-213ENST00000568922 CLTCQ00610 1675 aaKnown RBP17.99■□□□□ 0.47
GGA2-213ENST00000568922 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
GGA2-213ENST00000568922 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
GGA2-213ENST00000568922 CFAP65Q6ZU64 1925 aaKnown RBP17.97■□□□□ 0.47
GGA2-213ENST00000568922 NOS1P29475 1434 aa17.97■□□□□ 0.47
GGA2-213ENST00000568922 PREX1Q8TCU6 1659 aa17.95■□□□□ 0.46
GGA2-213ENST00000568922 NBPF8Q3BBV2 869 aa17.95■□□□□ 0.46
GGA2-213ENST00000568922 DCAF11Q8TEB1 546 aa17.94■□□□□ 0.46
GGA2-213ENST00000568922 UGGT1Q9NYU2 1555 aa17.94■□□□□ 0.46
GGA2-213ENST00000568922 PIK3C2BO00750 1634 aa17.94■□□□□ 0.46
GGA2-213ENST00000568922 RGL3Q3MIN7 710 aa17.93■□□□□ 0.46
GGA2-213ENST00000568922 ARID4BQ4LE39 1312 aaPredicted RBP17.93■□□□□ 0.46
GGA2-213ENST00000568922 SYNMO15061 1565 aa17.93■□□□□ 0.46
GGA2-213ENST00000568922 MLECQ14165 292 aa17.93■□□□□ 0.46
GGA2-213ENST00000568922 STAC3Q96MF2 364 aa17.91■□□□□ 0.46
GGA2-213ENST00000568922 ESF1Q9H501 851 aaKnown RBP17.91■□□□□ 0.46
GGA2-213ENST00000568922 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
GGA2-213ENST00000568922 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
GGA2-213ENST00000568922 MROH2AA6NES4 1674 aa17.9■□□□□ 0.46
GGA2-213ENST00000568922 RALGAPBQ86X10 1494 aa17.89■□□□□ 0.46
GGA2-213ENST00000568922 ERVK-7P63135 1459 aa17.89■□□□□ 0.45
GGA2-213ENST00000568922 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
GGA2-213ENST00000568922 PRAG1Q86YV5 1406 aa17.88■□□□□ 0.45
GGA2-213ENST00000568922 IFT172Q9UG01 1749 aa17.88■□□□□ 0.45
GGA2-213ENST00000568922 TRPM1Q7Z4N2 1603 aa17.88■□□□□ 0.45
GGA2-213ENST00000568922 SPATA31D1Q6ZQQ2 1576 aa17.87■□□□□ 0.45
GGA2-213ENST00000568922 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
GGA2-213ENST00000568922 ZMYM3Q14202 1370 aa17.85■□□□□ 0.45
GGA2-213ENST00000568922 EIF4G2P78344 907 aaKnown RBP eCLIP17.84■□□□□ 0.451e-15■■■■■ 40.5
GGA2-213ENST00000568922 MADDQ8WXG6 1647 aa17.84■□□□□ 0.45
GGA2-213ENST00000568922 MYOM2P54296 1465 aa17.83■□□□□ 0.45
GGA2-213ENST00000568922 FER1L4A9Z1Z3 1794 aa17.83■□□□□ 0.44
GGA2-213ENST00000568922 PPLO60437 1756 aa17.83■□□□□ 0.44
GGA2-213ENST00000568922 FBXO31Q5XUX0 539 aaPredicted RBP17.82■□□□□ 0.44
GGA2-213ENST00000568922 LAMC1P11047 1609 aa17.81■□□□□ 0.44
GGA2-213ENST00000568922 RPGRIP1LQ68CZ1 1315 aa17.81■□□□□ 0.44
GGA2-213ENST00000568922 CHGAP10645 457 aaKnown RBP17.81■□□□□ 0.44
GGA2-213ENST00000568922 IDI1Q13907 227 aa17.81■□□□□ 0.44
GGA2-213ENST00000568922 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
GGA2-213ENST00000568922 HSPA5P11021 654 aaKnown RBP17.8■□□□□ 0.44
GGA2-213ENST00000568922 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
GGA2-213ENST00000568922 KIAA1210Q9ULL0 1709 aa17.79■□□□□ 0.44
GGA2-213ENST00000568922 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
GGA2-213ENST00000568922 MYO5BQ9ULV0 1848 aa17.79■□□□□ 0.44
GGA2-213ENST00000568922 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
GGA2-213ENST00000568922 HIRIP3Q9BW71 556 aaPredicted RBP17.77■□□□□ 0.44
GGA2-213ENST00000568922 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.44
GGA2-213ENST00000568922 C3P01024 1663 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms