RNA–Protein interactions for RNA: ENST00000568794.5

COX4I1-216, Transcript of cytochrome c oxidase subunit 4I1, human

TSL 5 BASIC

Gene COX4I1, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COX4I1-216	ENST00000568794	DNMT1	P26358	1616 aa	Known RBP	33.03	■■■□□ 2.88
COX4I1-216	ENST00000568794	RNF17	Q9BXT8	1623 aa	Known RBP	33.03	■■■□□ 2.88
COX4I1-216	ENST00000568794	CAMSAP1	Q5T5Y3	1602 aa		33.02	■■■□□ 2.88
COX4I1-216	ENST00000568794	TCOF1	Q13428	1488 aa	Known RBP	33.01	■■■□□ 2.88
COX4I1-216	ENST00000568794	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.01	■■■□□ 2.87
COX4I1-216	ENST00000568794	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33	■■■□□ 2.87
COX4I1-216	ENST00000568794	WASHC2C	Q9Y4E1	1318 aa		33	■■■□□ 2.87
COX4I1-216	ENST00000568794	DAPK1	P53355	1430 aa		32.99	■■■□□ 2.87
COX4I1-216	ENST00000568794	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.98	■■■□□ 2.87
COX4I1-216	ENST00000568794	SHANK2	Q9UPX8	1470 aa		32.98	■■■□□ 2.87
COX4I1-216	ENST00000568794	NCOA1	Q15788	1441 aa		32.97	■■■□□ 2.87
COX4I1-216	ENST00000568794	FAM135A	Q9P2D6	1515 aa		32.97	■■■□□ 2.87
COX4I1-216	ENST00000568794	CEP152	O94986	1710 aa		32.97	■■■□□ 2.87
COX4I1-216	ENST00000568794	MROH1	Q8NDA8	1641 aa		32.96	■■■□□ 2.87
COX4I1-216	ENST00000568794	DUOX2	Q9NRD8	1548 aa		32.96	■■■□□ 2.87
COX4I1-216	ENST00000568794	CFAP65	Q6ZU64	1925 aa	Known RBP	32.94	■■■□□ 2.86
COX4I1-216	ENST00000568794	PZP	P20742	1482 aa		32.94	■■■□□ 2.86
COX4I1-216	ENST00000568794	KIF15	Q9NS87	1388 aa		32.94	■■■□□ 2.86
COX4I1-216	ENST00000568794	RRP7BP	Q9NSQ0	103 aa		32.93	■■■□□ 2.86
COX4I1-216	ENST00000568794	ABCC3	O15438	1527 aa		32.92	■■■□□ 2.86
COX4I1-216	ENST00000568794	FBXO41	Q8TF61	875 aa		32.92	■■■□□ 2.86
COX4I1-216	ENST00000568794	ZC3H13	Q5T200	1668 aa	Known RBP	32.91	■■■□□ 2.86
COX4I1-216	ENST00000568794	CHIC2	Q9UKJ5	165 aa		32.91	■■■□□ 2.86
COX4I1-216	ENST00000568794	DMRT2	Q9Y5R5	561 aa		32.91	■■■□□ 2.86
COX4I1-216	ENST00000568794	TNR	Q92752	1358 aa		32.89	■■■□□ 2.86
COX4I1-216	ENST00000568794	NCKAP5L	Q9HCH0	1330 aa		32.88	■■■□□ 2.85
COX4I1-216	ENST00000568794	PTPRT	O14522	1441 aa		32.87	■■■□□ 2.85
COX4I1-216	ENST00000568794	A2ML1	A8K2U0	1454 aa		32.86	■■■□□ 2.85
COX4I1-216	ENST00000568794	FAM50A	Q14320	339 aa	Known RBP	32.86	■■■□□ 2.85
COX4I1-216	ENST00000568794	CERK	Q8TCT0	537 aa		32.85	■■■□□ 2.85
COX4I1-216	ENST00000568794	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.83	■■■□□ 2.85
COX4I1-216	ENST00000568794	ERBIN	Q96RT1	1412 aa		32.82	■■■□□ 2.84
COX4I1-216	ENST00000568794	PLA2R1	Q13018	1463 aa		32.8	■■■□□ 2.84
COX4I1-216	ENST00000568794	PRDM15	P57071	1507 aa	Predicted RBP	32.79	■■■□□ 2.84
COX4I1-216	ENST00000568794	DEPDC5	O75140	1603 aa		32.78	■■■□□ 2.84
COX4I1-216	ENST00000568794	ANKRD30A	Q9BXX3	1397 aa		32.78	■■■□□ 2.84
COX4I1-216	ENST00000568794	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.76	■■■□□ 2.83
COX4I1-216	ENST00000568794	POLR1A	O95602	1720 aa	Predicted RBP	32.76	■■■□□ 2.83
COX4I1-216	ENST00000568794	SPATA31D1	Q6ZQQ2	1576 aa		32.75	■■■□□ 2.83
COX4I1-216	ENST00000568794	ERVK-7	P63135	1459 aa		32.74	■■■□□ 2.83
COX4I1-216	ENST00000568794	LTBP4	Q8N2S1	1624 aa		32.72	■■■□□ 2.83
COX4I1-216	ENST00000568794	ADGRL2	O95490	1459 aa		32.71	■■■□□ 2.83
COX4I1-216	ENST00000568794	NLRP1	Q9C000	1473 aa		32.7	■■■□□ 2.83
COX4I1-216	ENST00000568794	PKD2	Q13563	968 aa		32.7	■■■□□ 2.83
COX4I1-216	ENST00000568794	UGGT1	Q9NYU2	1555 aa		32.69	■■■□□ 2.82
COX4I1-216	ENST00000568794	NEURL4	Q96JN8	1562 aa		32.67	■■■□□ 2.82
COX4I1-216	ENST00000568794	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.67	■■■□□ 2.82
COX4I1-216	ENST00000568794	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.64	■■■□□ 2.82
COX4I1-216	ENST00000568794	KANK1	Q14678	1352 aa		32.61	■■■□□ 2.81
COX4I1-216	ENST00000568794	VWDE	Q8N2E2	1590 aa		32.61	■■■□□ 2.81
COX4I1-216	ENST00000568794	UBR1	Q8IWV7	1749 aa		32.6	■■■□□ 2.81
COX4I1-216	ENST00000568794	ARHGAP31	Q2M1Z3	1444 aa		32.59	■■■□□ 2.81
COX4I1-216	ENST00000568794	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.58	■■■□□ 2.81
COX4I1-216	ENST00000568794	ANKRD50	Q9ULJ7	1429 aa		32.58	■■■□□ 2.81
COX4I1-216	ENST00000568794	ITGAE	P38570	1179 aa		32.55	■■■□□ 2.8
COX4I1-216	ENST00000568794	LMTK2	Q8IWU2	1503 aa		32.55	■■■□□ 2.8
COX4I1-216	ENST00000568794	ANKLE2	Q86XL3	938 aa		32.53	■■■□□ 2.8
COX4I1-216	ENST00000568794	PIK3C2B	O00750	1634 aa		32.52	■■■□□ 2.8
COX4I1-216	ENST00000568794	EFCAB6	Q5THR3	1501 aa		32.51	■■■□□ 2.8
COX4I1-216	ENST00000568794	IQGAP1	P46940	1657 aa		32.5	■■■□□ 2.79
COX4I1-216	ENST00000568794	SYNM	O15061	1565 aa		32.48	■■■□□ 2.79
COX4I1-216	ENST00000568794	NPHP4	O75161	1426 aa	Predicted RBP	32.47	■■■□□ 2.79
COX4I1-216	ENST00000568794	UNC13B	O14795	1591 aa		32.45	■■■□□ 2.79
COX4I1-216	ENST00000568794	MED14	O60244	1454 aa		32.44	■■■□□ 2.78
COX4I1-216	ENST00000568794	IQSEC2	Q5JU85	1478 aa		32.43	■■■□□ 2.78
COX4I1-216	ENST00000568794	TET3	O43151	1660 aa		32.43	■■■□□ 2.78
COX4I1-216	ENST00000568794	ROCK1	Q13464	1354 aa		32.43	■■■□□ 2.78
COX4I1-216	ENST00000568794	GCC2	Q8IWJ2	1684 aa		32.41	■■■□□ 2.78
COX4I1-216	ENST00000568794	NOS1	P29475	1434 aa		32.38	■■■□□ 2.77
COX4I1-216	ENST00000568794	STRCP1	A6NGW2	1772 aa		32.37	■■■□□ 2.77
COX4I1-216	ENST00000568794	SCAF11	Q99590	1463 aa	Known RBP	32.37	■■■□□ 2.77
COX4I1-216	ENST00000568794	IDI1	Q13907	227 aa		32.37	■■■□□ 2.77
COX4I1-216	ENST00000568794	MYO5B	Q9ULV0	1848 aa		32.37	■■■□□ 2.77
COX4I1-216	ENST00000568794	SLIT1	O75093	1534 aa		32.36	■■■□□ 2.77
COX4I1-216	ENST00000568794	ARHGAP23	Q9P227	1491 aa		32.36	■■■□□ 2.77
COX4I1-216	ENST00000568794	LTK	P29376	864 aa		32.36	■■■□□ 2.77
COX4I1-216	ENST00000568794	STAG3	Q9UJ98	1225 aa		32.35	■■■□□ 2.77
COX4I1-216	ENST00000568794		E9PCH4	1651 aa		32.34	■■■□□ 2.77
COX4I1-216	ENST00000568794	KDM5A	P29375	1690 aa	Known RBP	32.33	■■■□□ 2.77
COX4I1-216	ENST00000568794	RRBP1	Q9P2E9	1410 aa	Known RBP	32.33	■■■□□ 2.77
COX4I1-216	ENST00000568794	IQGAP3	Q86VI3	1631 aa		32.33	■■■□□ 2.77
COX4I1-216	ENST00000568794	TXNDC2	Q86VQ3	553 aa		32.32	■■■□□ 2.76
COX4I1-216	ENST00000568794	CPS1	P31327	1500 aa		32.31	■■■□□ 2.76
COX4I1-216	ENST00000568794	RPRD2	Q5VT52	1461 aa	Known RBP	32.3	■■■□□ 2.76
COX4I1-216	ENST00000568794	ADGRB3	O60242	1522 aa		32.3	■■■□□ 2.76
COX4I1-216	ENST00000568794	UBAP1L	F5GYI3	381 aa		32.29	■■■□□ 2.76
COX4I1-216	ENST00000568794	TMEM2	Q9UHN6	1383 aa		32.28	■■■□□ 2.76
COX4I1-216	ENST00000568794	NUP155	O75694	1391 aa		32.24	■■■□□ 2.75
COX4I1-216	ENST00000568794	EID1	Q9Y6B2	187 aa		32.24	■■■□□ 2.75
COX4I1-216	ENST00000568794	SLC52A1	Q9NWF4	448 aa		32.2	■■■□□ 2.75
COX4I1-216	ENST00000568794	TMEM131L	A2VDJ0	1609 aa		32.18	■■■□□ 2.74
COX4I1-216	ENST00000568794	SENP3	Q9H4L4	574 aa	Predicted RBP	32.18	■■■□□ 2.74
COX4I1-216	ENST00000568794	LRRC7	Q96NW7	1537 aa		32.15	■■■□□ 2.74
COX4I1-216	ENST00000568794	XIRP1	Q702N8	1843 aa	Known RBP	32.12	■■■□□ 2.73
COX4I1-216	ENST00000568794	NAIP	Q13075	1403 aa		32.12	■■■□□ 2.73
COX4I1-216	ENST00000568794	SCAF1	Q9H7N4	1312 aa	Known RBP	32.12	■■■□□ 2.73
COX4I1-216	ENST00000568794	CHGA	P10645	457 aa	Known RBP	32.12	■■■□□ 2.73
COX4I1-216	ENST00000568794	PIP4K2B	P78356	416 aa		32.11	■■■□□ 2.73
COX4I1-216	ENST00000568794	SPHKAP	Q2M3C7	1700 aa		32.11	■■■□□ 2.73
COX4I1-216	ENST00000568794	ALK	Q9UM73	1620 aa		32.09	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms