RNA–Protein interactions for RNA: ENST00000568693.1

E2F4-211, Transcript of E2F transcription factor 4, human

TSL 2

Gene E2F4, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
E2F4-211	ENST00000568693	MLH3	Q9UHC1	1453 aa		12.34	□□□□□ -0.43
E2F4-211	ENST00000568693	AFAP1	Q8N556	730 aa		12.34	□□□□□ -0.43
E2F4-211	ENST00000568693	DUOX2	Q9NRD8	1548 aa		12.33	□□□□□ -0.44
E2F4-211	ENST00000568693	ANKRD50	Q9ULJ7	1429 aa		12.33	□□□□□ -0.44
E2F4-211	ENST00000568693	KIDINS220	Q9ULH0	1771 aa		12.33	□□□□□ -0.44
E2F4-211	ENST00000568693	ERBIN	Q96RT1	1412 aa		12.32	□□□□□ -0.44
E2F4-211	ENST00000568693	SLC4A2	P04920	1241 aa		12.32	□□□□□ -0.44
E2F4-211	ENST00000568693	ACIN1	Q9UKV3	1341 aa	Known RBP	12.32	□□□□□ -0.44
E2F4-211	ENST00000568693	MAGI2	Q86UL8	1455 aa		12.3	□□□□□ -0.44
E2F4-211	ENST00000568693	ABCA6	Q8N139	1617 aa		12.29	□□□□□ -0.44
E2F4-211	ENST00000568693	ARHGEF40	Q8TER5	1519 aa		12.28	□□□□□ -0.44
E2F4-211	ENST00000568693	ADAMTSL3	P82987	1691 aa		12.28	□□□□□ -0.44
E2F4-211	ENST00000568693	DHX57	Q6P158	1386 aa	Known RBP	12.28	□□□□□ -0.44
E2F4-211	ENST00000568693	DIP2C	Q9Y2E4	1556 aa		12.27	□□□□□ -0.44
E2F4-211	ENST00000568693	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.27	□□□□□ -0.44
E2F4-211	ENST00000568693	BCORL1	Q5H9F3	1711 aa		12.27	□□□□□ -0.45
E2F4-211	ENST00000568693	KDM5D	Q9BY66	1539 aa		12.27	□□□□□ -0.45
E2F4-211	ENST00000568693	UNC13B	O14795	1591 aa		12.26	□□□□□ -0.45
E2F4-211	ENST00000568693	DHX29	Q7Z478	1369 aa	Known RBP	12.26	□□□□□ -0.45
E2F4-211	ENST00000568693	A2M	P01023	1474 aa		12.26	□□□□□ -0.45
E2F4-211	ENST00000568693	DEPDC5	O75140	1603 aa		12.24	□□□□□ -0.45
E2F4-211	ENST00000568693	CCER1	Q8TC90	406 aa	Predicted RBP	12.24	□□□□□ -0.45
E2F4-211	ENST00000568693	SIGLEC1	Q9BZZ2	1709 aa		12.24	□□□□□ -0.45
E2F4-211	ENST00000568693	RERE	Q9P2R6	1566 aa		12.24	□□□□□ -0.45
E2F4-211	ENST00000568693	MYT1L	Q9UL68	1186 aa		12.24	□□□□□ -0.45
E2F4-211	ENST00000568693	YEATS2	Q9ULM3	1422 aa		12.24	□□□□□ -0.45
E2F4-211	ENST00000568693	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.23	□□□□□ -0.45
E2F4-211	ENST00000568693	CLSPN	Q9HAW4	1339 aa		12.23	□□□□□ -0.45
E2F4-211	ENST00000568693	MADD	Q8WXG6	1647 aa		12.22	□□□□□ -0.45
E2F4-211	ENST00000568693	PZP	P20742	1482 aa		12.22	□□□□□ -0.45
E2F4-211	ENST00000568693	RNF17	Q9BXT8	1623 aa	Known RBP	12.22	□□□□□ -0.45
E2F4-211	ENST00000568693	PRDM15	P57071	1507 aa	Predicted RBP	12.21	□□□□□ -0.45
E2F4-211	ENST00000568693	PTPRM	P28827	1452 aa		12.21	□□□□□ -0.45
E2F4-211	ENST00000568693	IQGAP3	Q86VI3	1631 aa		12.21	□□□□□ -0.46
E2F4-211	ENST00000568693	ATP10A	O60312	1499 aa		12.21	□□□□□ -0.46
E2F4-211	ENST00000568693	TRIM52	Q96A61	297 aa		12.2	□□□□□ -0.46
E2F4-211	ENST00000568693	NUP155	O75694	1391 aa		12.19	□□□□□ -0.46
E2F4-211	ENST00000568693	MROH1	Q8NDA8	1641 aa		12.19	□□□□□ -0.46
E2F4-211	ENST00000568693	FAM135A	Q9P2D6	1515 aa		12.19	□□□□□ -0.46
E2F4-211	ENST00000568693	RIMS1	Q86UR5	1692 aa	Known RBP	12.19	□□□□□ -0.46
E2F4-211	ENST00000568693	VWDE	Q8N2E2	1590 aa		12.18	□□□□□ -0.46
E2F4-211	ENST00000568693	AGL	P35573	1532 aa		12.18	□□□□□ -0.46
E2F4-211	ENST00000568693	MPHOSPH9	Q99550	1183 aa		12.17	□□□□□ -0.46
E2F4-211	ENST00000568693	KIF3B	O15066	747 aa		12.16	□□□□□ -0.46
E2F4-211	ENST00000568693	MYCN	P04198	464 aa	Predicted RBP	12.15	□□□□□ -0.46
E2F4-211	ENST00000568693	LMTK2	Q8IWU2	1503 aa		12.15	□□□□□ -0.46
E2F4-211	ENST00000568693	KANK1	Q14678	1352 aa		12.15	□□□□□ -0.46
E2F4-211	ENST00000568693	FER1L4	A9Z1Z3	1794 aa		12.15	□□□□□ -0.46
E2F4-211	ENST00000568693	TET3	O43151	1660 aa		12.13	□□□□□ -0.47
E2F4-211	ENST00000568693	ZEB1	P37275	1124 aa	Predicted RBP	12.13	□□□□□ -0.47
E2F4-211	ENST00000568693	MLEC	Q14165	292 aa		12.13	□□□□□ -0.47
E2F4-211	ENST00000568693	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.13	□□□□□ -0.47	1e-6	■□□□□ 10.7
E2F4-211	ENST00000568693	ZC3H13	Q5T200	1668 aa	Known RBP	12.13	□□□□□ -0.47
E2F4-211	ENST00000568693	ABCC3	O15438	1527 aa		12.11	□□□□□ -0.47
E2F4-211	ENST00000568693	EFCAB6	Q5THR3	1501 aa		12.11	□□□□□ -0.47
E2F4-211	ENST00000568693	PKD2	Q13563	968 aa		12.11	□□□□□ -0.47
E2F4-211	ENST00000568693	ANKRD30B	Q9BXX2	1392 aa		12.1	□□□□□ -0.47
E2F4-211	ENST00000568693	ATXN8OS	P0DMR3	200 aa		12.1	□□□□□ -0.47
E2F4-211	ENST00000568693	CEP152	O94986	1710 aa		12.09	□□□□□ -0.47
E2F4-211	ENST00000568693		E9PCH4	1651 aa		12.09	□□□□□ -0.47
E2F4-211	ENST00000568693	RPRD2	Q5VT52	1461 aa	Known RBP	12.08	□□□□□ -0.47
E2F4-211	ENST00000568693	LMTK3	Q96Q04	1460 aa		12.08	□□□□□ -0.47
E2F4-211	ENST00000568693	DCAF8L1	A6NGE4	600 aa		12.08	□□□□□ -0.48
E2F4-211	ENST00000568693	GGT6	Q6P531	493 aa		12.08	□□□□□ -0.48
E2F4-211	ENST00000568693	CAMSAP1	Q5T5Y3	1602 aa		12.08	□□□□□ -0.48
E2F4-211	ENST00000568693	WASHC2C	Q9Y4E1	1318 aa		12.06	□□□□□ -0.48
E2F4-211	ENST00000568693	TRPM2	O94759	1503 aa		12.06	□□□□□ -0.48
E2F4-211	ENST00000568693	PTPRT	O14522	1441 aa		12.05	□□□□□ -0.48
E2F4-211	ENST00000568693	ARHGAP31	Q2M1Z3	1444 aa		12.05	□□□□□ -0.48
E2F4-211	ENST00000568693	PLA2R1	Q13018	1463 aa		12.05	□□□□□ -0.48
E2F4-211	ENST00000568693	SPHKAP	Q2M3C7	1700 aa		12.05	□□□□□ -0.48
E2F4-211	ENST00000568693	NPAT	Q14207	1427 aa		12.04	□□□□□ -0.48
E2F4-211	ENST00000568693	SIN3A	Q96ST3	1273 aa		12.04	□□□□□ -0.48
E2F4-211	ENST00000568693	CEBPA	P49715	358 aa	Predicted RBP	12.03	□□□□□ -0.48
E2F4-211	ENST00000568693	C3	P01024	1663 aa		12.03	□□□□□ -0.48
E2F4-211	ENST00000568693	PREX1	Q8TCU6	1659 aa		12.03	□□□□□ -0.48
E2F4-211	ENST00000568693	CCDC144A	A2RUR9	1427 aa		12.03	□□□□□ -0.48
E2F4-211	ENST00000568693	TIMELESS	Q9UNS1	1208 aa		12.02	□□□□□ -0.49
E2F4-211	ENST00000568693	CLTC	Q00610	1675 aa	Known RBP	12.02	□□□□□ -0.49
E2F4-211	ENST00000568693	NEUROD1	Q13562	356 aa		12.01	□□□□□ -0.49
E2F4-211	ENST00000568693	CNTLN	Q9NXG0	1405 aa		12.01	□□□□□ -0.49
E2F4-211	ENST00000568693	HSPA2	P54652	639 aa		12	□□□□□ -0.49
E2F4-211	ENST00000568693	TONSL	Q96HA7	1378 aa		12	□□□□□ -0.49
E2F4-211	ENST00000568693	NOS1	P29475	1434 aa		12	□□□□□ -0.49
E2F4-211	ENST00000568693	MROH2A	A6NES4	1674 aa		12	□□□□□ -0.49
E2F4-211	ENST00000568693	SETD1B	Q9UPS6	1966 aa	Known RBP	11.99	□□□□□ -0.49
E2F4-211	ENST00000568693	ESF1	Q9H501	851 aa	Known RBP	11.99	□□□□□ -0.49
E2F4-211	ENST00000568693	CLTCL1	P53675	1640 aa		11.99	□□□□□ -0.49
E2F4-211	ENST00000568693	NEURL4	Q96JN8	1562 aa		11.98	□□□□□ -0.49
E2F4-211	ENST00000568693	SYNM	O15061	1565 aa		11.97	□□□□□ -0.49
E2F4-211	ENST00000568693	ERVK-7	P63135	1459 aa		11.97	□□□□□ -0.49
E2F4-211	ENST00000568693	PIK3C2B	O00750	1634 aa		11.97	□□□□□ -0.49
E2F4-211	ENST00000568693	SPATA31D1	Q6ZQQ2	1576 aa		11.96	□□□□□ -0.49
E2F4-211	ENST00000568693	ILDR1	Q86SU0	546 aa	Predicted RBP	11.96	□□□□□ -0.49
E2F4-211	ENST00000568693	UGGT1	Q9NYU2	1555 aa		11.95	□□□□□ -0.5
E2F4-211	ENST00000568693	UHRF1BP1	Q6BDS2	1440 aa		11.94	□□□□□ -0.5
E2F4-211	ENST00000568693	SPATA31E1	Q6ZUB1	1445 aa		11.94	□□□□□ -0.5
E2F4-211	ENST00000568693	ZMYM3	Q14202	1370 aa		11.94	□□□□□ -0.5
E2F4-211	ENST00000568693	STRC	Q7RTU9	1775 aa		11.93	□□□□□ -0.5
E2F4-211	ENST00000568693	ADGRB3	O60242	1522 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms